BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026555
         (890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283626.1| PREDICTED: ribosomal RNA small subunit methy...   184   3e-44
ref|XP_002451509.1| hypothetical protein SORBIDRAFT_04g003030 [S...   162   7e-38
emb|CBI20828.3| unnamed protein product [Vitis vinifera]              158   1e-36
ref|XP_002306643.1| predicted protein [Populus trichocarpa] gi|2...   158   1e-36
ref|XP_002520347.1| s-adenosyl-methyltransferase mraw, putative ...   151   2e-34

>ref|XP_002283626.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
           [Vitis vinifera]
          Length = 444

 Score =  184 bits (466), Expect = 3e-44
 Identities = 110/201 (54%), Positives = 136/201 (67%), Gaps = 6/201 (2%)
 Frame = +1

Query: 304 THSGKKSYTKNNATSKTSPTKRPPISSNKKQGPEKAKQEPAVSDEEKRRTRSKIEFDWRQ 483
           THS   S    NAT+ T   K+     N K G   AK E +++++ K+RTRS  EFD  Q
Sbjct: 31  THS---SLFLRNATTITKINKKKKKQRNGKGGIVTAKPE-SLAEKLKKRTRSDREFDKEQ 86

Query: 484 QHYYNLDGGHIPVLLGEVLQVFDR------RVPLRSFVDCTLGAAGHSSAIIQAHSEMEI 645
              Y     H+PV+LGEVL+VF          PLRSFVDCTLGAAGHSSAIIQAH E+E+
Sbjct: 87  AMVYGGTATHVPVMLGEVLEVFSSFSSSSSSSPLRSFVDCTLGAAGHSSAIIQAHPELEL 146

Query: 646 YVGLDVDPLAHEKAETLMNIVLDKELGGKASEDLEVYTFQKNFKDIKSALGEVDEKLLVH 825
           YVG+DVDP+AHEKA+  +     + L G +S  L+ +TF +NFK+IKS L EVDE+LL  
Sbjct: 147 YVGMDVDPIAHEKAQARI-----RSLCGDSSH-LKAHTFMRNFKNIKSVLREVDEELLSS 200

Query: 826 GVDGILMDLGVSSMQVSNAER 888
           GVDGILMDLG+SSMQV+NAER
Sbjct: 201 GVDGILMDLGMSSMQVNNAER 221


>ref|XP_002451509.1| hypothetical protein SORBIDRAFT_04g003030 [Sorghum bicolor]
           gi|241931340|gb|EES04485.1| hypothetical protein
           SORBIDRAFT_04g003030 [Sorghum bicolor]
          Length = 445

 Score =  162 bits (411), Expect = 7e-38
 Identities = 110/243 (45%), Positives = 142/243 (58%), Gaps = 13/243 (5%)
 Frame = +1

Query: 199 MAVAAARLVFFSRHRHSLFSPLLSTSLNYSTLRKKTHSGKKSYTKNNATSKTSPTKRPPI 378
           MAVAAAR +F S H H+     L+  +  +T  ++   GK       AT KT P  +P  
Sbjct: 1   MAVAAARRLF-SFHLHAR---PLAAGVAVATPHRR---GKHDAVSCKATGKTKPKPKPKS 53

Query: 379 SSNKKQGPEKAKQEPAVSDEEKRRTRSKIEFD----WRQQHYYNLDGGHIPVLLGEVLQV 546
            +   +G E+ +Q  A+ +  KRRTRS   FD     R+ H +     H+PVLLGEVL  
Sbjct: 54  KAKAVKGGER-QQRRALEEHLKRRTRSAASFDADLYGRRAHEH-----HVPVLLGEVLAA 107

Query: 547 FDRRVPLRSFVDCTLGAAGHSSAIIQAHSEMEIYVGLDVDPLAHEKAETLMNIVL---DK 717
           F R  PLRSFVDCTLGAAGHS A+++AH E+E+Y+G+DVDP A E     +   L   ++
Sbjct: 108 FRRPRPLRSFVDCTLGAAGHSLAMMEAHPELELYIGMDVDPSALEIGRGHIETFLAGRER 167

Query: 718 ELGGK----ASEDLEVYTFQKNFKDIKSALGEVDEKLLV--HGVDGILMDLGVSSMQVSN 879
           E  G+      E L  YT  KNFK IK  LG VDE L V   GVDGIL+DLG+SSMQV+ 
Sbjct: 168 EANGREEDVLQETLRAYTHVKNFKYIKQVLGSVDESLAVGSSGVDGILIDLGMSSMQVNR 227

Query: 880 AER 888
           + R
Sbjct: 228 SNR 230


>emb|CBI20828.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  158 bits (400), Expect = 1e-36
 Identities = 85/132 (64%), Positives = 103/132 (78%), Gaps = 6/132 (4%)
 Frame = +1

Query: 511 HIPVLLGEVLQVFDR------RVPLRSFVDCTLGAAGHSSAIIQAHSEMEIYVGLDVDPL 672
           H+PV+LGEVL+VF          PLRSFVDCTLGAAGHSSAIIQAH E+E+YVG+DVDP+
Sbjct: 9   HVPVMLGEVLEVFSSFSSSSSSSPLRSFVDCTLGAAGHSSAIIQAHPELELYVGMDVDPI 68

Query: 673 AHEKAETLMNIVLDKELGGKASEDLEVYTFQKNFKDIKSALGEVDEKLLVHGVDGILMDL 852
           AHEKA+  +     + L G +S  L+ +TF +NFK+IKS L EVDE+LL  GVDGILMDL
Sbjct: 69  AHEKAQARI-----RSLCGDSSH-LKAHTFMRNFKNIKSVLREVDEELLSSGVDGILMDL 122

Query: 853 GVSSMQVSNAER 888
           G+SSMQV+NAER
Sbjct: 123 GMSSMQVNNAER 134


>ref|XP_002306643.1| predicted protein [Populus trichocarpa] gi|222856092|gb|EEE93639.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score =  158 bits (400), Expect = 1e-36
 Identities = 96/207 (46%), Positives = 132/207 (63%), Gaps = 18/207 (8%)
 Frame = +1

Query: 322 SYTKNNATSKTSPT-KRPPISS-------------NKKQGPEKAKQEPAV--SDEEKRRT 453
           S  K     KT+P+  RP ++S              KK+   K+ +E  V  +D+EKRRT
Sbjct: 15  STAKQRFNIKTAPSFSRPVLASARAERSISTASKKKKKKERNKSVEELVVVKNDKEKRRT 74

Query: 454 RSKIEFDWRQQHYYNLDGGHIPVLLGEVLQVFDRRVPLRSFVDCTLGAAGHSSAIIQAHS 633
           RS+ E++  + H ++    H+PV+LGEV+ VF   +PLRSF+DCTLGAAGHSSAII+ H 
Sbjct: 75  RSEKEYE--ELHSFHETESHVPVMLGEVVDVFSS-LPLRSFIDCTLGAAGHSSAIIKGHP 131

Query: 634 EMEIYVGLDVDPLAHEKAETLMNIVLDKELGGKASEDLEVYTFQKNFKDIKSALGEVDE- 810
           E+E Y+G+DVDP+AH KA   ++ +L           L+ +   KNFK IKS +GE+D+ 
Sbjct: 132 ELECYIGMDVDPVAHAKARAHIDALLQ-----STRSSLKPHLLFKNFKYIKSVVGEIDDD 186

Query: 811 -KLLVHGVDGILMDLGVSSMQVSNAER 888
            KLL  GVDGILMDLG+SSMQV+N +R
Sbjct: 187 CKLLSSGVDGILMDLGMSSMQVNNPQR 213


>ref|XP_002520347.1| s-adenosyl-methyltransferase mraw, putative [Ricinus communis]
           gi|223540566|gb|EEF42133.1| s-adenosyl-methyltransferase
           mraw, putative [Ricinus communis]
          Length = 405

 Score =  151 bits (382), Expect = 2e-34
 Identities = 90/168 (53%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
 Frame = +1

Query: 388 KKQGPEKAKQEPAVSDE-EKRRTRSKIEFDWRQQHYYNLDGGHIPVLLGEVLQVFDRRVP 564
           KK   +K  Q  AV  E EKRRTRS  EF++++      +  H+PVLLGEV+ VF   + 
Sbjct: 35  KKSEEKKRAQFLAVKREKEKRRTRSDKEFEYKE------NDNHVPVLLGEVIDVFSS-LH 87

Query: 565 LRSFVDCTLGAAGHSSAIIQAHSEMEIYVGLDVDPLAHEKAETLMNIVLDKELGGKASED 744
           LRSFVDCTLGAAGHSSAII+ H E+E YVG+DVDP+AH KA   ++     +L    S  
Sbjct: 88  LRSFVDCTLGAAGHSSAIIKGHPELENYVGMDVDPVAHAKARACID-----DLMHSHSCH 142

Query: 745 LEVYTFQKNFKDIKSALGEVDEKLLVHGVDGILMDLGVSSMQVSNAER 888
           L+V+TF  NFK +K  L EVD      GVD ILMDLG+SSMQV+N ER
Sbjct: 143 LKVHTFLSNFKHVKPLLAEVDPNFFNSGVDAILMDLGMSSMQVNNPER 190