BLASTX nr result

ID: Coptis21_contig00026526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026526
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524124.1| ATPP2-A2, putative [Ricinus communis] gi|223...    84   2e-14
emb|CBI27170.3| unnamed protein product [Vitis vinifera]               78   7e-13
ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
gb|ABK95033.1| unknown [Populus trichocarpa]                           76   3e-12
ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula] ...    74   9e-12

>ref|XP_002524124.1| ATPP2-A2, putative [Ricinus communis] gi|223536591|gb|EEF38235.1|
           ATPP2-A2, putative [Ricinus communis]
          Length = 213

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 35/55 (63%), Positives = 45/55 (81%)
 Frame = -2

Query: 380 KPRAQWIELQVGEFYTSPDKLGDMEISMFEYEGGTWKKGLVIKGVVIRPKKHSSS 216
           KPRAQWIE+  GEF +SPD +G +EISM++YEGG WK+GLV+KGV +RPK   S+
Sbjct: 156 KPRAQWIEVPAGEFVSSPDNIGRIEISMYDYEGGKWKRGLVVKGVTLRPKNQVSN 210


>emb|CBI27170.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = -2

Query: 380 KPRAQWIELQVGEFYTSPDKLGDMEISMFEYEGGTWKKGLVIKGVVIRPK 231
           KP+ QWIE+ VG+F TS + +G++E S+FEYEGG WK GLV+KGV+I+PK
Sbjct: 189 KPKGQWIEIPVGQFQTSAENIGEIEFSLFEYEGGDWKSGLVVKGVIIQPK 238


>ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|222875189|gb|EEF12320.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 32/50 (64%), Positives = 41/50 (82%)
 Frame = -2

Query: 380 KPRAQWIELQVGEFYTSPDKLGDMEISMFEYEGGTWKKGLVIKGVVIRPK 231
           KPR QWIE+ VGEF TSP+ +G+++  M EY+GG WK+GLVIKG+ IRPK
Sbjct: 230 KPREQWIEVPVGEFITSPENVGEIQFGMHEYDGGEWKRGLVIKGIAIRPK 279


>gb|ABK95033.1| unknown [Populus trichocarpa]
          Length = 280

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 31/50 (62%), Positives = 40/50 (80%)
 Frame = -2

Query: 380 KPRAQWIELQVGEFYTSPDKLGDMEISMFEYEGGTWKKGLVIKGVVIRPK 231
           KPR QWIE+ VGE  TSP+ +G+++  M EY+GG WK+GLVIKG+ IRPK
Sbjct: 230 KPREQWIEVPVGELITSPENVGEIQFGMHEYDGGEWKRGLVIKGIAIRPK 279


>ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula]
           gi|355508931|gb|AES90073.1| F-box protein PP2-B10
           [Medicago truncatula] gi|388501714|gb|AFK38923.1|
           unknown [Medicago truncatula]
          Length = 293

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/50 (68%), Positives = 40/50 (80%)
 Frame = -2

Query: 380 KPRAQWIELQVGEFYTSPDKLGDMEISMFEYEGGTWKKGLVIKGVVIRPK 231
           K RA+WIE+ VGEF  S    G+MEISMFEYEGG WK+GLVIKG+ I+PK
Sbjct: 241 KLRARWIEVPVGEFVVSEKDGGEMEISMFEYEGGMWKQGLVIKGIAIKPK 290


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