BLASTX nr result

ID: Coptis21_contig00026499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026499
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161683.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic p...   249   2e-64
ref|XP_004142086.1| PREDICTED: eukaryotic peptide chain release ...   249   2e-64
gb|ADN33689.1| eukaryotic peptide chain release factor subunit [...   248   5e-64
ref|XP_003560681.1| PREDICTED: eukaryotic peptide chain release ...   246   1e-63
dbj|BAJ85616.1| predicted protein [Hordeum vulgare subsp. vulgare]    246   2e-63

>ref|XP_004161683.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic peptide chain release
           factor subunit 1-3-like [Cucumis sativus]
          Length = 436

 Score =  249 bits (635), Expect = 2e-64
 Identities = 122/133 (91%), Positives = 130/133 (97%)
 Frame = -3

Query: 400 GGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVE 221
           GGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVE
Sbjct: 260 GGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVE 319

Query: 220 TLIVWENLDLNRYVLKHSATSEIIIKHLNKEQEANQSNFRDSVTNAELEVQEKLSVLEWF 41
            LIVWENLD+NRYVLK++AT EIIIKHLNKEQEANQSNFRDS T+AELEVQEK+++LEWF
Sbjct: 320 ILIVWENLDINRYVLKNAATGEIIIKHLNKEQEANQSNFRDSATSAELEVQEKMALLEWF 379

Query: 40  ANEYKKFGCSLEF 2
           ANEYKKFGC+LEF
Sbjct: 380 ANEYKKFGCTLEF 392


>ref|XP_004142086.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
           [Cucumis sativus]
          Length = 436

 Score =  249 bits (635), Expect = 2e-64
 Identities = 122/133 (91%), Positives = 130/133 (97%)
 Frame = -3

Query: 400 GGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVE 221
           GGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVE
Sbjct: 260 GGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVE 319

Query: 220 TLIVWENLDLNRYVLKHSATSEIIIKHLNKEQEANQSNFRDSVTNAELEVQEKLSVLEWF 41
            LIVWENLD+NRYVLK++AT EIIIKHLNKEQEANQSNFRDS T+AELEVQEK+++LEWF
Sbjct: 320 ILIVWENLDINRYVLKNAATGEIIIKHLNKEQEANQSNFRDSATSAELEVQEKMALLEWF 379

Query: 40  ANEYKKFGCSLEF 2
           ANEYKKFGC+LEF
Sbjct: 380 ANEYKKFGCTLEF 392


>gb|ADN33689.1| eukaryotic peptide chain release factor subunit [Cucumis melo
           subsp. melo]
          Length = 436

 Score =  248 bits (632), Expect = 5e-64
 Identities = 120/133 (90%), Positives = 131/133 (98%)
 Frame = -3

Query: 400 GGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVE 221
           GGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVE
Sbjct: 260 GGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVE 319

Query: 220 TLIVWENLDLNRYVLKHSATSEIIIKHLNKEQEANQSNFRDSVTNAELEVQEKLSVLEWF 41
            LIVWENLD+NRYVLK+++T+EI+IKHLNKEQEANQSNFRDS T+AELEVQEK+++LEWF
Sbjct: 320 ILIVWENLDINRYVLKNASTAEIVIKHLNKEQEANQSNFRDSATSAELEVQEKMALLEWF 379

Query: 40  ANEYKKFGCSLEF 2
           ANEYKKFGC+LEF
Sbjct: 380 ANEYKKFGCTLEF 392


>ref|XP_003560681.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
           [Brachypodium distachyon]
           gi|357117871|ref|XP_003560685.1| PREDICTED: eukaryotic
           peptide chain release factor subunit 1-3-like
           [Brachypodium distachyon]
          Length = 437

 Score =  246 bits (628), Expect = 1e-63
 Identities = 119/133 (89%), Positives = 129/133 (96%)
 Frame = -3

Query: 400 GGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVE 221
           GGENGFNQAIELS+EIL+NVKFIQEK+LIGKYFEEISQDTGKYVFGVDDTLKALEMGAVE
Sbjct: 260 GGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVE 319

Query: 220 TLIVWENLDLNRYVLKHSATSEIIIKHLNKEQEANQSNFRDSVTNAELEVQEKLSVLEWF 41
           TL+VWENLD+NRYVLKHS T+EIIIKHLNK+QEA+QSNFRD  TNAELEVQEK S+LEWF
Sbjct: 320 TLMVWENLDVNRYVLKHSVTAEIIIKHLNKDQEADQSNFRDETTNAELEVQEKTSLLEWF 379

Query: 40  ANEYKKFGCSLEF 2
           ANEYKKFGC+LEF
Sbjct: 380 ANEYKKFGCTLEF 392


>dbj|BAJ85616.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 437

 Score =  246 bits (627), Expect = 2e-63
 Identities = 118/133 (88%), Positives = 129/133 (96%)
 Frame = -3

Query: 400 GGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVE 221
           GGENGFNQAIELS+EIL+NVKFIQEK+LIGKYFEEISQDTGKYVFGVDDTLKALEMGAVE
Sbjct: 260 GGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVE 319

Query: 220 TLIVWENLDLNRYVLKHSATSEIIIKHLNKEQEANQSNFRDSVTNAELEVQEKLSVLEWF 41
           TLIVWENLD+NRY LKHS + E+I+KHLNKEQEA+QSNFRDS TNAELEVQEK+S+LEWF
Sbjct: 320 TLIVWENLDINRYSLKHSVSGEVIVKHLNKEQEADQSNFRDSETNAELEVQEKISLLEWF 379

Query: 40  ANEYKKFGCSLEF 2
           ANEYKKFGC+LEF
Sbjct: 380 ANEYKKFGCALEF 392


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