BLASTX nr result

ID: Coptis21_contig00026495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026495
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB63832.1| MADS-box protein-like [Oryza sativa Japonica Gro...    81   1e-13
dbj|BAD17598.1| MADS-box protein-like [Oryza sativa Japonica Gro...    79   4e-13
ref|XP_003576926.1| PREDICTED: agamous-like MADS-box protein AGL...    78   9e-13
ref|XP_002441547.1| hypothetical protein SORBIDRAFT_09g029120 [S...    77   2e-12
ref|NP_001151024.1| DNA binding protein [Zea mays] gi|195643716|...    77   2e-12

>dbj|BAB63832.1| MADS-box protein-like [Oryza sativa Japonica Group]
           gi|125529315|gb|EAY77429.1| hypothetical protein
           OsI_05425 [Oryza sativa Indica Group]
           gi|125573501|gb|EAZ15016.1| hypothetical protein
           OsJ_04958 [Oryza sativa Japonica Group]
          Length = 208

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/71 (53%), Positives = 53/71 (74%)
 Frame = +3

Query: 15  GKQKIEMKKIESSKARQVCFSKRRQGFFKKASKFSQLSNTNIISIVFSPGGKPYTFSTNN 194
           G+QKIE+++IES +ARQVCFSKRR GFFKKAS+ S L + ++ ++VFSP GK Y+F   +
Sbjct: 16  GRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGHPS 75

Query: 195 AEADISRSVLD 227
            E  + R + D
Sbjct: 76  VECLLERFLPD 86


>dbj|BAD17598.1| MADS-box protein-like [Oryza sativa Japonica Group]
           gi|46806648|dbj|BAD17728.1| MADS-box protein-like [Oryza
           sativa Japonica Group] gi|218201669|gb|EEC84096.1|
           hypothetical protein OsI_30408 [Oryza sativa Indica
           Group]
          Length = 210

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 37/67 (55%), Positives = 51/67 (76%)
 Frame = +3

Query: 15  GKQKIEMKKIESSKARQVCFSKRRQGFFKKASKFSQLSNTNIISIVFSPGGKPYTFSTNN 194
           G+QKIE+++IES +ARQVCFSKRR GFFKKAS+ S L + ++ ++VFSP GK Y+F   +
Sbjct: 16  GRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGHPS 75

Query: 195 AEADISR 215
            E  + R
Sbjct: 76  VEFLLDR 82


>ref|XP_003576926.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Brachypodium
           distachyon]
          Length = 277

 Score = 78.2 bits (191), Expect = 9e-13
 Identities = 36/67 (53%), Positives = 50/67 (74%)
 Frame = +3

Query: 15  GKQKIEMKKIESSKARQVCFSKRRQGFFKKASKFSQLSNTNIISIVFSPGGKPYTFSTNN 194
           G+QKIE+++I+S +ARQVCFSKRR G FKKAS+ S L    + +IVFSP GK ++F T +
Sbjct: 11  GRQKIEIRRIDSDEARQVCFSKRRAGLFKKASELSILCGAQVAAIVFSPAGKAFSFGTPS 70

Query: 195 AEADISR 215
            +A + R
Sbjct: 71  VDAVLDR 77


>ref|XP_002441547.1| hypothetical protein SORBIDRAFT_09g029120 [Sorghum bicolor]
           gi|241946832|gb|EES19977.1| hypothetical protein
           SORBIDRAFT_09g029120 [Sorghum bicolor]
          Length = 245

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/67 (52%), Positives = 50/67 (74%)
 Frame = +3

Query: 15  GKQKIEMKKIESSKARQVCFSKRRQGFFKKASKFSQLSNTNIISIVFSPGGKPYTFSTNN 194
           G+QKIE+++IES +ARQVCFSKRR G FKKAS+ S L   ++ ++VFSP GK ++F   +
Sbjct: 10  GRQKIEIRRIESDEARQVCFSKRRAGLFKKASELSILCGADVAAVVFSPAGKAFSFGHPS 69

Query: 195 AEADISR 215
            E+ + R
Sbjct: 70  VESVVER 76


>ref|NP_001151024.1| DNA binding protein [Zea mays] gi|195643716|gb|ACG41326.1| DNA
           binding protein [Zea mays] gi|413946617|gb|AFW79266.1|
           putative MADS-box transcription factor family protein
           [Zea mays]
          Length = 247

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/67 (52%), Positives = 50/67 (74%)
 Frame = +3

Query: 15  GKQKIEMKKIESSKARQVCFSKRRQGFFKKASKFSQLSNTNIISIVFSPGGKPYTFSTNN 194
           G+QKIE+++IES +ARQVCFSKRR G FKKAS+ S L   ++ ++VFSP GK ++F   +
Sbjct: 10  GRQKIEIRRIESDEARQVCFSKRRAGLFKKASELSILCGADVAAVVFSPAGKAFSFGHPS 69

Query: 195 AEADISR 215
            E+ + R
Sbjct: 70  VESVVDR 76


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