BLASTX nr result

ID: Coptis21_contig00026491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026491
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95330.1| unknown [Populus trichocarpa]                           67   2e-09
gb|AFK46786.1| unknown [Medicago truncatula]                           66   3e-09
ref|XP_002338167.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002337669.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
gb|ABK94783.1| unknown [Populus trichocarpa]                           66   3e-09

>gb|ABK95330.1| unknown [Populus trichocarpa]
          Length = 359

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 26/56 (46%), Positives = 36/56 (64%)
 Frame = -3

Query: 269 SQAGFSTIPIPCCQVRSDGMCVPDSTPCPDRTKAIFYDAFHPTEVVNNVIANNYFS 102
           S  GF  + + CC  RSDG C+ DSTPC +RT+ +F+DA HPTE +N   A   ++
Sbjct: 287 SVLGFRVVDVGCCPARSDGQCIQDSTPCQNRTEYVFWDAIHPTEALNQFTARRSYN 342


>gb|AFK46786.1| unknown [Medicago truncatula]
          Length = 361

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
 Frame = -3

Query: 260 GFSTIPIPCCQVRSDGMCVPDSTPCPDRTKAIFYDAFHPTEVVNNVIA----NNYFSGST 93
           GF  +  PCC +  DGMC+ DS PC +R + IFYD FHPT  +NN+ A    N+ F+   
Sbjct: 290 GFKVLNAPCCPMGLDGMCIRDSKPCSNRNQYIFYDGFHPTSALNNITALSSYNSVFNPKM 349

Query: 92  CVP-NIQQVAQ 63
             P +I+ +AQ
Sbjct: 350 TYPMDIKHLAQ 360


>ref|XP_002338167.1| predicted protein [Populus trichocarpa] gi|222871078|gb|EEF08209.1|
           predicted protein [Populus trichocarpa]
          Length = 74

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = -3

Query: 260 GFSTIPIPCCQVRSDGMCVPDSTPCPDRTKAIFYDAFHPTEVVNNVIANNYFS 102
           GF  + + CC  RSDG C+ DSTPC +RT+ +F+DA HPTE +N   A   ++
Sbjct: 5   GFRVVDVGCCPARSDGQCIQDSTPCQNRTEYVFWDAIHPTEALNQFTARRSYN 57


>ref|XP_002337669.1| predicted protein [Populus trichocarpa] gi|222869527|gb|EEF06658.1|
           predicted protein [Populus trichocarpa]
          Length = 79

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 26/56 (46%), Positives = 36/56 (64%)
 Frame = -3

Query: 269 SQAGFSTIPIPCCQVRSDGMCVPDSTPCPDRTKAIFYDAFHPTEVVNNVIANNYFS 102
           S  GF  + + CC  RSDG C+ DSTPC +RT+ +F+DA HPTE +N   A   ++
Sbjct: 7   SVLGFRVVNVGCCPARSDGQCIQDSTPCQNRTEYVFWDAIHPTEALNQFTARRSYN 62


>gb|ABK94783.1| unknown [Populus trichocarpa]
          Length = 360

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 27/56 (48%), Positives = 36/56 (64%)
 Frame = -3

Query: 269 SQAGFSTIPIPCCQVRSDGMCVPDSTPCPDRTKAIFYDAFHPTEVVNNVIANNYFS 102
           S  GF    + CC  RSDG C+ DSTPC +RT+ +F+DA HPTE +N V A   ++
Sbjct: 288 SVLGFRVTNVECCPARSDGRCIQDSTPCQNRTEYVFWDAVHPTEAMNQVTARRSYN 343


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