BLASTX nr result

ID: Coptis21_contig00026481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026481
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590579.1| hypothetical protein MTR_1g071370 [Medicago ...   139   3e-31
ref|XP_002274621.2| PREDICTED: uncharacterized protein LOC100263...   130   1e-28
emb|CBI25042.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_003520202.1| PREDICTED: uncharacterized protein LOC100781...   128   6e-28
ref|XP_002307609.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27

>ref|XP_003590579.1| hypothetical protein MTR_1g071370 [Medicago truncatula]
           gi|355479627|gb|AES60830.1| hypothetical protein
           MTR_1g071370 [Medicago truncatula]
          Length = 1108

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/101 (66%), Positives = 75/101 (74%), Gaps = 4/101 (3%)
 Frame = +2

Query: 56  NTESSKCVMVYKQGGAPAVFQSPKCPRWTLSPEEKKRTTQNYCHSYMFTGRRKIQEDRTL 235
           + ESS C+ VYK GGAPAVFQSPKCPRW L     +      CHS M  GRRK QEDRTL
Sbjct: 23  HAESSTCLTVYKHGGAPAVFQSPKCPRWNLFDHNSRPQYTTRCHSAMLQGRRKSQEDRTL 82

Query: 236 CALDLRIPFPG----NEIIVGMVAVFDGHNGADASDMASNL 346
           C LDLRIPFPG     E++VG+VAVFDGHNGA+AS+MASNL
Sbjct: 83  CVLDLRIPFPGAMGIKEVVVGIVAVFDGHNGAEASEMASNL 123


>ref|XP_002274621.2| PREDICTED: uncharacterized protein LOC100263200 [Vitis vinifera]
          Length = 1211

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/101 (65%), Positives = 77/101 (76%), Gaps = 4/101 (3%)
 Frame = +2

Query: 56  NTESSKCVMVYKQGGAPAVFQSPKCPRWTLSPEEKKRTTQNYCHSYMFTGRRKIQEDRTL 235
           N ESS C+MVYK+GGAPAVFQSPKCP W LS +  +  T   C S M  GRRK QEDRT 
Sbjct: 179 NGESSTCLMVYKEGGAPAVFQSPKCPSWRLSNDASRPRTVT-CQSAMSQGRRKSQEDRTF 237

Query: 236 CALDLRIPFPGN----EIIVGMVAVFDGHNGADASDMASNL 346
           CALD+RIPFP +    E++VG+VAVFDGHNGA+AS+MAS L
Sbjct: 238 CALDVRIPFPRSTGLAEVMVGIVAVFDGHNGAEASEMASKL 278


>emb|CBI25042.3| unnamed protein product [Vitis vinifera]
          Length = 1069

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/101 (65%), Positives = 77/101 (76%), Gaps = 4/101 (3%)
 Frame = +2

Query: 56  NTESSKCVMVYKQGGAPAVFQSPKCPRWTLSPEEKKRTTQNYCHSYMFTGRRKIQEDRTL 235
           N ESS C+MVYK+GGAPAVFQSPKCP W LS +  +  T   C S M  GRRK QEDRT 
Sbjct: 23  NGESSTCLMVYKEGGAPAVFQSPKCPSWRLSNDASRPRTVT-CQSAMSQGRRKSQEDRTF 81

Query: 236 CALDLRIPFPGN----EIIVGMVAVFDGHNGADASDMASNL 346
           CALD+RIPFP +    E++VG+VAVFDGHNGA+AS+MAS L
Sbjct: 82  CALDVRIPFPRSTGLAEVMVGIVAVFDGHNGAEASEMASKL 122


>ref|XP_003520202.1| PREDICTED: uncharacterized protein LOC100781476 [Glycine max]
          Length = 1135

 Score =  128 bits (321), Expect = 6e-28
 Identities = 63/99 (63%), Positives = 71/99 (71%), Gaps = 4/99 (4%)
 Frame = +2

Query: 62  ESSKCVMVYKQGGAPAVFQSPKCPRWTLSPEEKKRTTQNYCHSYMFTGRRKIQEDRTLCA 241
           ESS C+ VYK GGAPAVFQSPKCPRW LS  +    T   C + M  GRR  QEDR LC 
Sbjct: 91  ESSTCLTVYKNGGAPAVFQSPKCPRWKLSDYDSPPQTTARCQTAMLQGRRNSQEDRALCV 150

Query: 242 LDLRIPFPG----NEIIVGMVAVFDGHNGADASDMASNL 346
           LD+RIPFPG     E+ VG+VAVFDGHNGA+AS+MAS L
Sbjct: 151 LDVRIPFPGPNGIKEVAVGIVAVFDGHNGAEASEMASKL 189


>ref|XP_002307609.1| predicted protein [Populus trichocarpa] gi|222857058|gb|EEE94605.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  126 bits (316), Expect = 2e-27
 Identities = 64/105 (60%), Positives = 72/105 (68%), Gaps = 10/105 (9%)
 Frame = +2

Query: 62  ESSKCVMVYKQGGAPAVFQSPKCPRWTLS-----PEEKKRTTQNYCHSYMFTGRRKIQED 226
           ESS C+ VYK+GGA AVFQSPKCPRW L      P        + C S M  GRRK QED
Sbjct: 28  ESSTCLTVYKEGGAAAVFQSPKCPRWNLPNYDSRPRSTATAPSSLCQSAMLQGRRKSQED 87

Query: 227 RTLCALDLRIPFPG-----NEIIVGMVAVFDGHNGADASDMASNL 346
           RTLCALD RIPFP       E++VG+VAVFDGHNGA+AS+MAS L
Sbjct: 88  RTLCALDFRIPFPAGKVGVKEVVVGIVAVFDGHNGAEASEMASKL 132


Top