BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026478
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [...   280   1e-73
ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicu...   277   7e-73
ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 ...   276   1e-72
emb|CBI15412.3| unnamed protein product [Vitis vinifera]              276   1e-72
ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-...   275   3e-72

>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
           gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
           MSH2, putative [Ricinus communis]
          Length = 936

 Score =  280 bits (716), Expect = 1e-73
 Identities = 142/187 (75%), Positives = 158/187 (84%)
 Frame = +3

Query: 3   LLDIVEINNRLDMVQAFVEDTELRQDLRQHLKRISDIERLMHNLEKRRAGLQHIVKLYQS 182
           LLD+ EIN+RLD+VQAFVEDT LRQDLRQHLKRISDIERL+HNLEKRRAGLQHIVKLYQS
Sbjct: 340 LLDVNEINSRLDLVQAFVEDTALRQDLRQHLKRISDIERLVHNLEKRRAGLQHIVKLYQS 399

Query: 183 SIRLPSIKTALGRYDGQFLPLIKERYLDPLECWTDDEHLNRFIALVEASVDLDQLENGEY 362
           SIRLP I+ AL +YDGQF  LIKERYLDPLE  TDD+HLN+FIALVE SVDLDQL+NGEY
Sbjct: 400 SIRLPYIRGALDKYDGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLDNGEY 459

Query: 363 MISSGYDSNLAALKDERDAVEQQIHNLHKQTANEXXXXXXXXXXXXXGTQFGHVFRITKK 542
           +IS  YD  L+ALKDE++++E QIHNLHKQTA +             GTQFGHVFRITKK
Sbjct: 460 LISPSYDPALSALKDEQESLECQIHNLHKQTAQDLDLPQDKGLKLDKGTQFGHVFRITKK 519

Query: 543 EEPKIRK 563
           EEPKIRK
Sbjct: 520 EEPKIRK 526


>ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicum]
           gi|296034481|gb|ADG85112.1| mismatch repair protein
           [Solanum lycopersicum]
          Length = 943

 Score =  277 bits (709), Expect = 7e-73
 Identities = 136/187 (72%), Positives = 155/187 (82%)
 Frame = +3

Query: 3   LLDIVEINNRLDMVQAFVEDTELRQDLRQHLKRISDIERLMHNLEKRRAGLQHIVKLYQS 182
           LLD+ EIN RLD+VQAFVED  LRQDLRQHLKRISDIERL HNLE++RA L H+VKLYQS
Sbjct: 344 LLDVDEINCRLDLVQAFVEDAALRQDLRQHLKRISDIERLTHNLERKRASLLHVVKLYQS 403

Query: 183 SIRLPSIKTALGRYDGQFLPLIKERYLDPLECWTDDEHLNRFIALVEASVDLDQLENGEY 362
            IR+P IK+ L RYDGQF PLI+ERY+D LE W+DD HLN+FIALVE +VDLDQLENGEY
Sbjct: 404 GIRIPYIKSVLERYDGQFAPLIRERYIDSLEKWSDDNHLNKFIALVETAVDLDQLENGEY 463

Query: 363 MISSGYDSNLAALKDERDAVEQQIHNLHKQTANEXXXXXXXXXXXXXGTQFGHVFRITKK 542
           MISS YD NL+ALKDE++ +EQQIHNLHKQTAN+             GTQFGHVFRITKK
Sbjct: 464 MISSAYDPNLSALKDEQETLEQQIHNLHKQTANDLDLPIDKSLKLDKGTQFGHVFRITKK 523

Query: 543 EEPKIRK 563
           EEPK+R+
Sbjct: 524 EEPKVRR 530


>ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 [Vitis vinifera]
          Length = 902

 Score =  276 bits (707), Expect = 1e-72
 Identities = 138/187 (73%), Positives = 158/187 (84%)
 Frame = +3

Query: 3   LLDIVEINNRLDMVQAFVEDTELRQDLRQHLKRISDIERLMHNLEKRRAGLQHIVKLYQS 182
           L+D+ EIN R D+VQAFVEDT LRQDLRQHLKRISDIERL+  LEKRRA LQH+VKLYQS
Sbjct: 304 LVDVNEINCRQDLVQAFVEDTALRQDLRQHLKRISDIERLLRTLEKRRASLQHVVKLYQS 363

Query: 183 SIRLPSIKTALGRYDGQFLPLIKERYLDPLECWTDDEHLNRFIALVEASVDLDQLENGEY 362
           SIRLP IK+ALG+YDGQF  LIKE+YLDPLE WTDD+HLNRFI LVEA+VDL++LENGEY
Sbjct: 364 SIRLPYIKSALGQYDGQFSSLIKEKYLDPLESWTDDDHLNRFIGLVEAAVDLNELENGEY 423

Query: 363 MISSGYDSNLAALKDERDAVEQQIHNLHKQTANEXXXXXXXXXXXXXGTQFGHVFRITKK 542
           MISSGYD+ LA+LK++++ +E QIHNLHKQTA +             GTQFGHVFRITKK
Sbjct: 424 MISSGYDAKLASLKNDQETLELQIHNLHKQTAIDLDLPMDKSLKLEKGTQFGHVFRITKK 483

Query: 543 EEPKIRK 563
           EEPKIRK
Sbjct: 484 EEPKIRK 490


>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
          Length = 945

 Score =  276 bits (707), Expect = 1e-72
 Identities = 138/187 (73%), Positives = 158/187 (84%)
 Frame = +3

Query: 3   LLDIVEINNRLDMVQAFVEDTELRQDLRQHLKRISDIERLMHNLEKRRAGLQHIVKLYQS 182
           L+D+ EIN R D+VQAFVEDT LRQDLRQHLKRISDIERL+  LEKRRA LQH+VKLYQS
Sbjct: 344 LVDVNEINCRQDLVQAFVEDTALRQDLRQHLKRISDIERLLRTLEKRRASLQHVVKLYQS 403

Query: 183 SIRLPSIKTALGRYDGQFLPLIKERYLDPLECWTDDEHLNRFIALVEASVDLDQLENGEY 362
           SIRLP IK+ALG+YDGQF  LIKE+YLDPLE WTDD+HLNRFI LVEA+VDL++LENGEY
Sbjct: 404 SIRLPYIKSALGQYDGQFSSLIKEKYLDPLESWTDDDHLNRFIGLVEAAVDLNELENGEY 463

Query: 363 MISSGYDSNLAALKDERDAVEQQIHNLHKQTANEXXXXXXXXXXXXXGTQFGHVFRITKK 542
           MISSGYD+ LA+LK++++ +E QIHNLHKQTA +             GTQFGHVFRITKK
Sbjct: 464 MISSGYDAKLASLKNDQETLELQIHNLHKQTAIDLDLPMDKSLKLEKGTQFGHVFRITKK 523

Query: 543 EEPKIRK 563
           EEPKIRK
Sbjct: 524 EEPKIRK 530


>ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-like [Glycine max]
          Length = 942

 Score =  275 bits (704), Expect = 3e-72
 Identities = 137/187 (73%), Positives = 157/187 (83%)
 Frame = +3

Query: 3   LLDIVEINNRLDMVQAFVEDTELRQDLRQHLKRISDIERLMHNLEKRRAGLQHIVKLYQS 182
           L+D+ EIN+RLD+VQAFVEDT LRQDLRQHLKRISDIERLMHN++KRRAGLQHIVKLYQS
Sbjct: 345 LVDVKEINSRLDIVQAFVEDTALRQDLRQHLKRISDIERLMHNIQKRRAGLQHIVKLYQS 404

Query: 183 SIRLPSIKTALGRYDGQFLPLIKERYLDPLECWTDDEHLNRFIALVEASVDLDQLENGEY 362
           SIRLP IK+AL RYDGQF  +++ RYL+P+E WTDDEHLN+FI LVEASVDLDQLEN EY
Sbjct: 405 SIRLPYIKSALERYDGQFSTMMRSRYLEPIELWTDDEHLNKFIGLVEASVDLDQLENREY 464

Query: 363 MISSGYDSNLAALKDERDAVEQQIHNLHKQTANEXXXXXXXXXXXXXGTQFGHVFRITKK 542
           MIS  YDS LA LKD+++ +E QI NLH+QTA++             GTQFGHVFRITKK
Sbjct: 465 MISPSYDSILANLKDQQELLESQIQNLHRQTADDLDLPMDKALKLDKGTQFGHVFRITKK 524

Query: 543 EEPKIRK 563
           EEPKIRK
Sbjct: 525 EEPKIRK 531