BLASTX nr result

ID: Coptis21_contig00026464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026464
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270547.1| PREDICTED: uncharacterized protein LOC100241...   114   1e-23
ref|XP_002533214.1| conserved hypothetical protein [Ricinus comm...   114   1e-23
emb|CAN78256.1| hypothetical protein VITISV_031957 [Vitis vinifera]   114   1e-23
ref|XP_002870128.1| hypothetical protein ARALYDRAFT_493182 [Arab...    97   2e-18
ref|NP_567518.1| uncharacterized protein [Arabidopsis thaliana] ...    96   2e-18

>ref|XP_002270547.1| PREDICTED: uncharacterized protein LOC100241339 [Vitis vinifera]
          Length = 321

 Score =  114 bits (284), Expect = 1e-23
 Identities = 65/151 (43%), Positives = 93/151 (61%), Gaps = 4/151 (2%)
 Frame = +1

Query: 1   SQPFLTQIYEKEILALSVHTRFEAREIQKEVRADAVTFIHLQSLFFIPCYTLSLLALIMT 180
           S P  +QIY  E +A    TRFEAR + KE RA A++ + L +LFF PCY LSLLA I  
Sbjct: 65  SHPIKSQIYHLEAVAALSPTRFEARHVWKESRAYAISLVRLNALFFFPCYALSLLAAITA 124

Query: 181 VNATALAYNGKQPDFVMAVKAVMFTWKRQLVTSGVVYVIVLTYCILTRVILLLVGDV--Y 354
           V++T L+ NGK+P    A+ AV  TWK+ LVT+  VY ++L Y +L R ++    +    
Sbjct: 125 VHSTGLSCNGKRPTLDTALTAVRTTWKKPLVTTICVYAVMLVYVLLQRTLVAAAAEAGGL 184

Query: 355 ARMLVWILLVVL--EGCVLAILGMGMVVSVL 441
             + V + LV L  E  ++A+L +G+VVSV+
Sbjct: 185 GPVAVVVALVGLGVEVYLMAVLSLGVVVSVM 215


>ref|XP_002533214.1| conserved hypothetical protein [Ricinus communis]
           gi|223526971|gb|EEF29167.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 335

 Score =  114 bits (284), Expect = 1e-23
 Identities = 64/149 (42%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
 Frame = +1

Query: 1   SQPFLTQIYEKEILALSVHTRFEAREIQKEVRADAVTFIHLQSLFFIPCYTLSLLALIMT 180
           S P  +QI   E LA    TRFEAR++ KE R   V+ +HL+ L+FIP Y LSLLA +  
Sbjct: 85  SDPLKSQIIHLEYLASRAPTRFEARQVWKESRELVVSLLHLKLLYFIPTYILSLLAAVAV 144

Query: 181 VNATALAYNGKQPDFVMAVKAVMFTWKRQLVTSGVVYVIVLTYCILTRVILLLVG--DVY 354
           + AT   YN K   F   + A    W R LVTS  VYVI++ Y  +  V+ +++G  +V 
Sbjct: 145 IAATESRYNRKTTSFSTLLSAFKANWTRPLVTSICVYVILMLYSTIVYVLKVIIGSSNVK 204

Query: 355 ARMLVWILLVVLEGCVLAILGMGMVVSVL 441
            + L+W+ +  LE  V+A+LG+G+VVSVL
Sbjct: 205 LQFLMWVFVSGLEIYVMAVLGLGLVVSVL 233


>emb|CAN78256.1| hypothetical protein VITISV_031957 [Vitis vinifera]
          Length = 321

 Score =  114 bits (284), Expect = 1e-23
 Identities = 65/151 (43%), Positives = 93/151 (61%), Gaps = 4/151 (2%)
 Frame = +1

Query: 1   SQPFLTQIYEKEILALSVHTRFEAREIQKEVRADAVTFIHLQSLFFIPCYTLSLLALIMT 180
           S P  +QIY  E +A    TRFEAR + KE RA A++ + L +LFF PCY LSLLA I  
Sbjct: 65  SHPIKSQIYHLEAVAALSPTRFEARHVWKESRAYAISLVRLNALFFFPCYALSLLAAITA 124

Query: 181 VNATALAYNGKQPDFVMAVKAVMFTWKRQLVTSGVVYVIVLTYCILTRVILLLVGDV--Y 354
           V++T L+ NGK+P    A+ AV  TWK+ LVT+  VY ++L Y +L R ++    +    
Sbjct: 125 VHSTGLSCNGKRPTLDTALTAVRTTWKKPLVTTICVYAVMLVYVLLQRTLVAAAAEAGGL 184

Query: 355 ARMLVWILLVVL--EGCVLAILGMGMVVSVL 441
             + V + LV L  E  ++A+L +G+VVSV+
Sbjct: 185 GPVAVAVALVGLGVEVYLMAVLSLGVVVSVM 215


>ref|XP_002870128.1| hypothetical protein ARALYDRAFT_493182 [Arabidopsis lyrata subsp.
           lyrata] gi|297315964|gb|EFH46387.1| hypothetical protein
           ARALYDRAFT_493182 [Arabidopsis lyrata subsp. lyrata]
          Length = 313

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/141 (36%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
 Frame = +1

Query: 22  IYEKEILALSVHTRFEAREIQKEVRADAVTFIHLQSLFFIPCYTLSLLALIMTVNATALA 201
           ++  E LA  VHTRFEAR+I +E R DAV+ +HL+S +F+P + LS +A I  + +T+ +
Sbjct: 60  VFRLEALANVVHTRFEARQIWQESREDAVSLLHLKSRYFVPSFILSCIASITVITSTSFS 119

Query: 202 YNGKQPDFVMAVKAVMFTWKRQLVTSGVVYVIVLTYCILTRVILLLVG-DVYARMLVWIL 378
           + G  P    +  +V  +W R   TS ++Y ++  Y  +   +  LVG     R L+ I 
Sbjct: 120 HQGLNPSLKSSFASVKSSWMRVTATSIIIYGLLFLYSPIPMFLSALVGYTPTLRYLITIF 179

Query: 379 LVVLEGCVLAILGMGMVVSVL 441
            + +E  ++AI G+G+VVSVL
Sbjct: 180 CLGVEVYIMAITGLGLVVSVL 200


>ref|NP_567518.1| uncharacterized protein [Arabidopsis thaliana]
           gi|110737516|dbj|BAF00700.1| hypothetical protein
           [Arabidopsis thaliana] gi|332658416|gb|AEE83816.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 313

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 53/141 (37%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
 Frame = +1

Query: 22  IYEKEILALSVHTRFEAREIQKEVRADAVTFIHLQSLFFIPCYTLSLLALIMTVNATALA 201
           ++  E LA  VHTRFEAR+I +E R DAV+ +HL+  +F+P + LS +A I  + +T+ +
Sbjct: 60  VFRLEALANVVHTRFEARQIWQESREDAVSLLHLKFRYFVPSFILSCMASITVITSTSFS 119

Query: 202 YNGKQPDFVMAVKAVMFTWKRQLVTSGVVYVIVLTYCILTRVILLLVG-DVYARMLVWIL 378
           + G  P    +  +V  +W R   TS +VY ++  Y  ++  +  LVG     R L+ IL
Sbjct: 120 HQGINPSLKSSFASVKSSWMRVTATSIIVYGLLFLYSPISMFLSALVGYTPTLRYLITIL 179

Query: 379 LVVLEGCVLAILGMGMVVSVL 441
            + +E  ++AI G+G VVSVL
Sbjct: 180 FLGVEVYIMAITGLGFVVSVL 200


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