BLASTX nr result

ID: Coptis21_contig00026455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026455
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [M...    61   9e-08
emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]    61   9e-08
ref|XP_003555098.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    55   5e-06

>ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [Medicago truncatula]
           gi|355493993|gb|AES75196.1| Galactose-1-phosphate
           uridylyltransferase [Medicago truncatula]
          Length = 679

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
 Frame = -3

Query: 238 VDLTEHFITDRVFESREELIGWAGRIGKETGSIIVIKKSDHSSK----GRTPRLFLGCER 71
           VD ++ F T  VF +RE L+ WA  IG+E G  ++I++SD+       GR   + LGCER
Sbjct: 498 VDYSDAFTTKEVFPTREYLLNWARAIGREHGFTVIIQRSDNGGLKKRIGRKTTVILGCER 557

Query: 70  SGKFRIHKKIVKDQHEKKK 14
           SGK+R +K  +  +   KK
Sbjct: 558 SGKYRQYKDALARKTGTKK 576


>emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]
          Length = 773

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = -3

Query: 238 VDLTEHFITDRVFESREELIGWAGRIGKETGSIIVIKKSDHSSKGRT-PRLFLGCERSGK 62
           +D T  F TD +  SRE LI W    GK  G +I+I+++D  +  R+ PR+   CERSG 
Sbjct: 1   MDYTNVFTTDAIHPSREALIEWVRETGKRNGMVIIIQRADIGATNRSRPRITFVCERSGA 60

Query: 61  FRIHKKIVKDQHEKKKRKIK 2
           +R H    K +  KKKRK K
Sbjct: 61  YR-HTGXDKGEEGKKKRKRK 79


>ref|XP_003555098.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 367

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/71 (39%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
 Frame = -3

Query: 217 ITDRVFESREELIGWAGRIGKETGSIIVIKKSDH--SSKGRTPRLFLGCERSGKFRIHKK 44
           +++ VFE++E+++ WA  + +E G + VI +SD    S+GRT  + +GCERSGK++  KK
Sbjct: 12  MSEEVFETQEDVLKWARTVARENGFVAVIIRSDTYIGSRGRTSFVLIGCERSGKYKGRKK 71

Query: 43  --IVKDQHEKK 17
             + KD   +K
Sbjct: 72  EFVRKDTGTRK 82


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