BLASTX nr result

ID: Coptis21_contig00026452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026452
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269779.2| PREDICTED: putative disease resistance prote...    97   1e-18
emb|CAN60801.1| hypothetical protein VITISV_022857 [Vitis vinifera]    97   1e-18
ref|XP_002526758.1| Disease resistance protein RGA2, putative [R...    94   1e-17
ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trich...    93   3e-17
ref|XP_002265276.2| PREDICTED: putative disease resistance RPP13...    92   3e-17

>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 1091

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 57/154 (37%), Positives = 81/154 (52%), Gaps = 21/154 (13%)
 Frame = -3

Query: 506  LQHMVSLTELKIIDCDEFTSLPKED---------------------GLQKLISLEYLEFC 390
            LQ +VSL   +I+ C +  SLP+E                      GL+ L SLE L   
Sbjct: 932  LQDLVSLQRFEILSCPKLVSLPEEGLSSALRYLSLCVCNSLQSLPKGLENLSSLEELSIS 991

Query: 389  SCAKLKSLHDEELPSGLNSFRIVSCPTLISLPRYIQNLSSLQLLEICKCPQLLTLPGNQL 210
             C KL +  +E+LPS L   RI +C  L+SLP+ +  LS LQ L I  C  L +LP   L
Sbjct: 992  KCPKLVTFPEEKLPSSLKLLRISACANLVSLPKRLNELSVLQHLAIDSCHALRSLPEEGL 1051

Query: 209  PVTLQMLYIRGCPALKEAFQKGGNNWYKIAHIPN 108
            P +++ L I+    L++  ++GG +W KIAHIP+
Sbjct: 1052 PASVRSLSIQRSQLLEKRCEEGGEDWNKIAHIPD 1085


>emb|CAN60801.1| hypothetical protein VITISV_022857 [Vitis vinifera]
          Length = 951

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 57/154 (37%), Positives = 81/154 (52%), Gaps = 21/154 (13%)
 Frame = -3

Query: 506  LQHMVSLTELKIIDCDEFTSLPKED---------------------GLQKLISLEYLEFC 390
            LQ +VSL   +I+ C +  SLP+E                      GL+ L SLE L   
Sbjct: 792  LQDLVSLQRFEILSCPKLVSLPEEGLSSALRYLSLCVCNSLQSLPKGLENLSSLEELSIS 851

Query: 389  SCAKLKSLHDEELPSGLNSFRIVSCPTLISLPRYIQNLSSLQLLEICKCPQLLTLPGNQL 210
             C KL +  +E+LPS L   RI +C  L+SLP+ +  LS LQ L I  C  L +LP   L
Sbjct: 852  KCPKLVTFPEEKLPSSLKLLRISACANLVSLPKRLNELSVLQHLAIDSCHALRSLPEEGL 911

Query: 209  PVTLQMLYIRGCPALKEAFQKGGNNWYKIAHIPN 108
            P +++ L I+    L++  ++GG +W KIAHIP+
Sbjct: 912  PASVRSLSIQRSQLLEKRCEEGGEDWNKIAHIPD 945


>ref|XP_002526758.1| Disease resistance protein RGA2, putative [Ricinus communis]
            gi|223533885|gb|EEF35612.1| Disease resistance protein
            RGA2, putative [Ricinus communis]
          Length = 1100

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 59/146 (40%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
 Frame = -3

Query: 509  VLQHMVSLTELKIIDCDEFTSLPKEDGLQKLISLEYLEFCSCAKLKSLHDE-ELPSGLNS 333
            +LQ++ SL +L IIDC   T+L  +  +Q L SLE L   +C +L    ++ +    L  
Sbjct: 950  LLQNLTSLQQLDIIDCPRITTLSHD--MQHLTSLEVLIIRACKELDLSSEQWQCLRSLRK 1007

Query: 332  FRIVSCPTLISLPRYIQNLSSLQLLEICKCPQLLTLP-GNQLPVTLQMLYIRGCPALKEA 156
             RIV+   L+SL + +Q++++LQ LEIC CP L TLP       TL+ L I  CP L + 
Sbjct: 1008 LRIVNLAKLVSLHQGLQHVTTLQQLEICSCPILGTLPEWISGLTTLRHLEINECPLLSQK 1067

Query: 155  FQKG-GNNWYKIAHIPNIRMDSDWLQ 81
                 G +W KIAHIPNI++D  W+Q
Sbjct: 1068 CSNNKGEDWSKIAHIPNIKIDGRWIQ 1093


>ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222845009|gb|EEE82556.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1093

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/127 (40%), Positives = 75/127 (59%)
 Frame = -3

Query: 494  VSLTELKIIDCDEFTSLPKEDGLQKLISLEYLEFCSCAKLKSLHDEELPSGLNSFRIVSC 315
            ++L  L I  C++   LP  +GLQ L SL+ L   +C +L S  +E+LPS L S RI +C
Sbjct: 961  LALQYLSIRACNDLKDLP--NGLQSLSSLQDLSILNCPRLVSFPEEKLPSSLKSLRISAC 1018

Query: 314  PTLISLPRYIQNLSSLQLLEICKCPQLLTLPGNQLPVTLQMLYIRGCPALKEAFQKGGNN 135
              L SLP  + +L +L+ L I  CP++ +LP   LP +L  L I  C  L E  ++GG +
Sbjct: 1019 ANLESLPSGLHDLLNLESLGIQSCPKIASLPTLGLPASLSSLSIFDCELLDERCRQGGED 1078

Query: 134  WYKIAHI 114
            W KIAH+
Sbjct: 1079 WPKIAHV 1085



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 45/116 (38%), Positives = 63/116 (54%)
 Frame = -3

Query: 509  VLQHMVSLTELKIIDCDEFTSLPKEDGLQKLISLEYLEFCSCAKLKSLHDEELPSGLNSF 330
            + Q + SL EL+I       +L +E GL  L SL+ LE   C KL+S   +  P  L   
Sbjct: 907  LFQALSSLKELRIKHFYRLRTLQEELGLHDLPSLQRLEILFCPKLRSFSGKGFPLALQYL 966

Query: 329  RIVSCPTLISLPRYIQNLSSLQLLEICKCPQLLTLPGNQLPVTLQMLYIRGCPALK 162
             I +C  L  LP  +Q+LSSLQ L I  CP+L++ P  +LP +L+ L I  C  L+
Sbjct: 967  SIRACNDLKDLPNGLQSLSSLQDLSILNCPRLVSFPEEKLPSSLKSLRISACANLE 1022


>ref|XP_002265276.2| PREDICTED: putative disease resistance RPP13-like protein 1-like
            [Vitis vinifera]
          Length = 1425

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 60/139 (43%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
 Frame = -3

Query: 509  VLQHMVSLTELKIIDCDEFTSLPKEDGLQKLISLEYLEFCSCAKLKSLHDEELP--SGLN 336
            +L+H+ SL  L I  CD   SL    GLQ L SLE LE   C KL+SL +  LP  + L 
Sbjct: 1281 ILRHLSSLERLSICRCDALQSLTGS-GLQHLTSLEKLEIRLCPKLQSLKEVGLPCLAPLK 1339

Query: 335  SFRIVSCPTLISLPRY-IQNLSSLQLLEICKCPQLLTLPGNQLPVTLQMLYIRGCPALKE 159
               I   P L SL    +Q+L+SL++L I  CP+L +L G +LP +L  L+I+ CP L++
Sbjct: 1340 QLHISGLPELQSLTEVGLQHLTSLEILCIFNCPKLQSLTGERLPDSLSFLHIKNCPLLEQ 1399

Query: 158  AFQ-KGGNNWYKIAHIPNI 105
              Q + G  W  IAHIP I
Sbjct: 1400 RCQFEEGQEWDYIAHIPRI 1418


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