BLASTX nr result

ID: Coptis21_contig00026438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026438
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279982.2| PREDICTED: disease resistance protein At4g27...    64   1e-08
dbj|BAK00144.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   2e-07
emb|CBI29678.3| unnamed protein product [Vitis vinifera]               59   3e-07
ref|XP_002280123.1| PREDICTED: disease resistance protein RPS5-l...    59   5e-07
emb|CAN64054.1| hypothetical protein VITISV_040011 [Vitis vinifera]    59   5e-07

>ref|XP_002279982.2| PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
          Length = 1030

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/74 (39%), Positives = 45/74 (60%)
 Frame = -1

Query: 302  ILPQLKELTLRGLPELSSLCRSGLLVDWPSLVSLRICECGNLKRLPFNTHSVPKLKEFVM 123
            ++P L+ + L GLP L + CR      WP L  L++  CG LK+LP N  S   +KE   
Sbjct: 799  VVPNLRVIDLHGLPNLRTFCRQE--ESWPHLEHLQVSRCGLLKKLPLNRQSATTIKEIRG 856

Query: 122  DRDLFNRLEWEDES 81
            +++ +N+LEW+D+S
Sbjct: 857  EQEWWNQLEWDDDS 870


>dbj|BAK00144.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/73 (43%), Positives = 47/73 (64%)
 Frame = -1

Query: 296  PQLKELTLRGLPELSSLCRSGLLVDWPSLVSLRICECGNLKRLPFNTHSVPKLKEFVMDR 117
            P+LKEL L GLP L +L  S  ++ +PSL SL+I +C +LK+L     +  +LKE    R
Sbjct: 826  PKLKELYLHGLPRLGALSGSACMLRFPSLKSLKIVDCLSLKKLKL---AAAELKEIKCAR 882

Query: 116  DLFNRLEWEDESV 78
            D ++ LEW+D+ V
Sbjct: 883  DWWDGLEWDDDEV 895


>emb|CBI29678.3| unnamed protein product [Vitis vinifera]
          Length = 966

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/74 (43%), Positives = 45/74 (60%)
 Frame = -1

Query: 299  LPQLKELTLRGLPELSSLCRSGLLVDWPSLVSLRICECGNLKRLPFNTHSVPKLKEFVMD 120
            LP+LK L L  LP+L S+  S  L +WPSL S++I  C  LKRLPFN  +  KL+     
Sbjct: 883  LPRLKTLVLLDLPKLKSIWVSDSL-EWPSLQSIKISMCDMLKRLPFNIANAAKLRLIEGQ 941

Query: 119  RDLFNRLEWEDESV 78
            +  +  L WED+++
Sbjct: 942  QSWWGALVWEDDAI 955


>ref|XP_002280123.1| PREDICTED: disease resistance protein RPS5-like [Vitis vinifera]
          Length = 998

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = -1

Query: 302  ILPQLKELTLRGLPELSSLCRSGLLVDWPSLVSLRICECGNLKRLPFNTHSVPK-LKEFV 126
            I  +LK L L GLP L S+ +  LL  +PSL  +++CEC  L+ LPF++++  K LK+  
Sbjct: 810  IFSRLKYLKLNGLPRLKSIYQHPLL--FPSLEIIKVCECKGLRSLPFDSNTSSKSLKKIK 867

Query: 125  MDRDLFNRLEWEDESV 78
             +   +N+L+WEDE++
Sbjct: 868  GETSWWNQLKWEDETI 883


>emb|CAN64054.1| hypothetical protein VITISV_040011 [Vitis vinifera]
          Length = 1364

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
 Frame = -1

Query: 302  ILPQLKELTLRGLPELSSLCRSGLLVDWPSLVSLRICECGNLKRLPFNTHS-VPKLKEFV 126
            I  +L  L L G+P L S+C+  LL  +PSL  + +  C  L+RLPF+++S +  LK+  
Sbjct: 1038 IFTRLTSLVLGGMPMLESICQGALL--FPSLEVISVINCPRLRRLPFDSNSAIKSLKKIE 1095

Query: 125  MDRDLFNRLEWEDESVMSXXXXXXXXXXXDHFDHPRAKP 9
             D+  +  LEW+DESV++               HP  +P
Sbjct: 1096 GDQTWWESLEWKDESVVAIFTNYFSPQYLADPIHPSEEP 1134


Top