BLASTX nr result

ID: Coptis21_contig00026431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026431
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...    64   1e-08
emb|CBI20820.3| unnamed protein product [Vitis vinifera]               59   5e-07

>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
           vinifera]
          Length = 2024

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 17/131 (12%)
 Frame = +2

Query: 20  KEAVLRAAWEAASHFHGSADVIEAEASRSAVRYKACIPTSMAEE----FLLDRKSLDQLR 187
           +EA + AA +AAS    +A+ IE   SR  + Y+ C  T + EE    F++D  SL QLR
Sbjct: 598 EEAAILAASKAASTVIDAANAIEV--SRLVILYR-CTETEINEEVEEFFIMDADSLAQLR 654

Query: 188 EDFCIQCLKKLGIPKTLMAPV--SNVVDVFIALLQGCRKV-----------DVLQICCSL 328
           E +CIQCL+ LG    ++ PV     VDV +ALLQ   K+           DVL++ C+L
Sbjct: 655 EKYCIQCLEILGEYVEVLGPVLHEKGVDVCLALLQRSSKLKEASKLAMLLPDVLKLICAL 714

Query: 329 VAQEIFQCICI 361
            A   F  + +
Sbjct: 715 AAHRKFAAVFV 725


>emb|CBI20820.3| unnamed protein product [Vitis vinifera]
          Length = 1760

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 21/135 (15%)
 Frame = +2

Query: 20  KEAVLRAAWEAASHFHGSADVIEAEASRSAVRYKAC--------IPTSMAEEFLLDRKSL 175
           +EA + AA +AAS    +A+ IE   S S +             I   + E F++D  SL
Sbjct: 435 EEAAILAASKAASTVIDAANAIEVSRSSSNMNADPMNSRGTETEINEEVEEFFIMDADSL 494

Query: 176 DQLREDFCIQCLKKLGIPKTLMAPV--SNVVDVFIALLQGCRKV-----------DVLQI 316
            QLRE +CIQCL+ LG    ++ PV     VDV +ALLQ   K+           DVL++
Sbjct: 495 AQLREKYCIQCLEILGEYVEVLGPVLHEKGVDVCLALLQRSSKLKEASKLAMLLPDVLKL 554

Query: 317 CCSLVAQEIFQCICI 361
            C+L A   F  + +
Sbjct: 555 ICALAAHRKFAAVFV 569


Top