BLASTX nr result

ID: Coptis21_contig00026426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026426
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278409.2| PREDICTED: serine/threonine-protein kinase A...   196   2e-48
emb|CBI37818.3| unnamed protein product [Vitis vinifera]              196   2e-48
ref|XP_002305538.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
ref|XP_002521238.1| Serine/threonine-protein kinase ATR, putativ...   191   5e-47
gb|ABD83299.1| GlimmerM protein 276 [Beta vulgaris]                   188   3e-46

>ref|XP_002278409.2| PREDICTED: serine/threonine-protein kinase ATR-like [Vitis vinifera]
          Length = 2730

 Score =  196 bits (497), Expect = 2e-48
 Identities = 97/137 (70%), Positives = 109/137 (79%)
 Frame = -2

Query: 412  IRELPLLPSIPVLHRVNDVIQKVRGSMTLRDQLRDVDDGLNHESLNVRYMVACELSKLLN 233
            IRE P LPSIP L +VN+VIQ  RGSM L+DQL D+ DGL+HE+LNVRYMVACELSKLLN
Sbjct: 1240 IREFPPLPSIPALMKVNEVIQDARGSMNLKDQLLDIVDGLDHENLNVRYMVACELSKLLN 1299

Query: 232  VRREDVTTLILGEGAXXXXXXXXXXXXXLRGCSEESRTAVGQRLKLVCADCLGALGAVDP 53
            +RR+D+T LI GE               LRGC+EESRT VGQRLKL+CADCLGALGAVDP
Sbjct: 1300 LRRDDITALITGEAGSHMDVLSSLITSLLRGCAEESRTVVGQRLKLICADCLGALGAVDP 1359

Query: 52   AKVKGVPCQRFKIECSD 2
            AKVKG+ CQRFKIECSD
Sbjct: 1360 AKVKGISCQRFKIECSD 1376


>emb|CBI37818.3| unnamed protein product [Vitis vinifera]
          Length = 2496

 Score =  196 bits (497), Expect = 2e-48
 Identities = 97/137 (70%), Positives = 109/137 (79%)
 Frame = -2

Query: 412  IRELPLLPSIPVLHRVNDVIQKVRGSMTLRDQLRDVDDGLNHESLNVRYMVACELSKLLN 233
            IRE P LPSIP L +VN+VIQ  RGSM L+DQL D+ DGL+HE+LNVRYMVACELSKLLN
Sbjct: 1195 IREFPPLPSIPALMKVNEVIQDARGSMNLKDQLLDIVDGLDHENLNVRYMVACELSKLLN 1254

Query: 232  VRREDVTTLILGEGAXXXXXXXXXXXXXLRGCSEESRTAVGQRLKLVCADCLGALGAVDP 53
            +RR+D+T LI GE               LRGC+EESRT VGQRLKL+CADCLGALGAVDP
Sbjct: 1255 LRRDDITALITGEAGSHMDVLSSLITSLLRGCAEESRTVVGQRLKLICADCLGALGAVDP 1314

Query: 52   AKVKGVPCQRFKIECSD 2
            AKVKG+ CQRFKIECSD
Sbjct: 1315 AKVKGISCQRFKIECSD 1331


>ref|XP_002305538.1| predicted protein [Populus trichocarpa] gi|222848502|gb|EEE86049.1|
            predicted protein [Populus trichocarpa]
          Length = 2740

 Score =  196 bits (497), Expect = 2e-48
 Identities = 101/137 (73%), Positives = 109/137 (79%)
 Frame = -2

Query: 412  IRELPLLPSIPVLHRVNDVIQKVRGSMTLRDQLRDVDDGLNHESLNVRYMVACELSKLLN 233
            I E PLLPSIP L  VN  IQ+ RGSMTL+DQLRDV DGLNHE+LNVRYMV CELSKLLN
Sbjct: 1266 IHEFPLLPSIPELMEVNKAIQEARGSMTLKDQLRDVVDGLNHENLNVRYMVVCELSKLLN 1325

Query: 232  VRREDVTTLILGEGAXXXXXXXXXXXXXLRGCSEESRTAVGQRLKLVCADCLGALGAVDP 53
            +RR D+T+LI GE A             LRGC+EESRTAVGQRLKLVCADCLGALGAVDP
Sbjct: 1326 LRRGDITSLITGEVAADMDILSSLITALLRGCAEESRTAVGQRLKLVCADCLGALGAVDP 1385

Query: 52   AKVKGVPCQRFKIECSD 2
            AKVKG+  QRFKIECSD
Sbjct: 1386 AKVKGISSQRFKIECSD 1402


>ref|XP_002521238.1| Serine/threonine-protein kinase ATR, putative [Ricinus communis]
            gi|223539506|gb|EEF41094.1| Serine/threonine-protein
            kinase ATR, putative [Ricinus communis]
          Length = 2822

 Score =  191 bits (485), Expect = 5e-47
 Identities = 100/137 (72%), Positives = 108/137 (78%)
 Frame = -2

Query: 412  IRELPLLPSIPVLHRVNDVIQKVRGSMTLRDQLRDVDDGLNHESLNVRYMVACELSKLLN 233
            I E P LPSI  L  VN+ IQ+ RGSMTL+DQLRDV DGLNHE+LNVRYMVACEL+KLLN
Sbjct: 1243 ICEFPPLPSILELMEVNEFIQEARGSMTLKDQLRDVVDGLNHENLNVRYMVACELNKLLN 1302

Query: 232  VRREDVTTLILGEGAXXXXXXXXXXXXXLRGCSEESRTAVGQRLKLVCADCLGALGAVDP 53
            +RRED+T LI GE A             LRGC+EESRT VGQRLKLVCADCLGALGAVDP
Sbjct: 1303 LRREDLTALITGEVAANMDVLSSLITSLLRGCAEESRTVVGQRLKLVCADCLGALGAVDP 1362

Query: 52   AKVKGVPCQRFKIECSD 2
            AKVKG  CQRFKIECSD
Sbjct: 1363 AKVKGSSCQRFKIECSD 1379


>gb|ABD83299.1| GlimmerM protein 276 [Beta vulgaris]
          Length = 1831

 Score =  188 bits (478), Expect = 3e-46
 Identities = 96/137 (70%), Positives = 106/137 (77%)
 Frame = -2

Query: 412 IRELPLLPSIPVLHRVNDVIQKVRGSMTLRDQLRDVDDGLNHESLNVRYMVACELSKLLN 233
           IRE PLLPSIP L +VN VIQ+ RGSMTL+DQLRD  DGLNHE+LNVRYMVACELSKLL 
Sbjct: 401 IREFPLLPSIPALVKVNQVIQEARGSMTLKDQLRDAADGLNHENLNVRYMVACELSKLLK 460

Query: 232 VRREDVTTLILGEGAXXXXXXXXXXXXXLRGCSEESRTAVGQRLKLVCADCLGALGAVDP 53
           +++EDV   I  E               LRGC+EESRT+VGQRLKLVCADCLGALGAVDP
Sbjct: 461 LKKEDVAAAIATELGLDFTVLSSLITSLLRGCAEESRTSVGQRLKLVCADCLGALGAVDP 520

Query: 52  AKVKGVPCQRFKIECSD 2
           AKVK   CQRFKI+CSD
Sbjct: 521 AKVKAASCQRFKIQCSD 537


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