BLASTX nr result

ID: Coptis21_contig00026425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026425
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317678.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002298949.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
dbj|BAK05419.1| predicted protein [Hordeum vulgare subsp. vulgare]     91   1e-16
dbj|BAK06853.1| predicted protein [Hordeum vulgare subsp. vulgare]     87   1e-15
dbj|BAK06574.1| predicted protein [Hordeum vulgare subsp. vulgare]     86   4e-15

>ref|XP_002317678.1| predicted protein [Populus trichocarpa] gi|222860743|gb|EEE98290.1|
           predicted protein [Populus trichocarpa]
          Length = 912

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 51/92 (55%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
 Frame = +1

Query: 1   HPPHQKKIYSPYNNQALAENYTVSIPESDLLLTI-NTTAFKFSVSRRSTGDILFETNTT- 174
           H P     YSP N++ L +N  +S P SDLL T+ NT  F FSV+R+S+GD+LF+T+T  
Sbjct: 121 HSPKNYLHYSPLNHRLLLDNNLLSDPNSDLLFTLHNTIPFGFSVTRKSSGDVLFDTSTDM 180

Query: 175 ------LVFKDQYIQVSSSLPANRSSLYGLGE 252
                 LVFKDQYIQ+SS LP  RSSLYGLGE
Sbjct: 181 SNPDTFLVFKDQYIQLSSRLPIKRSSLYGLGE 212


>ref|XP_002298949.1| predicted protein [Populus trichocarpa] gi|222846207|gb|EEE83754.1|
           predicted protein [Populus trichocarpa]
          Length = 885

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
 Frame = +1

Query: 1   HPPHQKKIYSPYNNQALAENYTVSIPESDLLLTI-NTTAFKFSVSRRSTGDILFETN--- 168
           H P     YSP  ++ L EN  +S P SDLL T+ NTT F F+++R+S+GD+LF+T+   
Sbjct: 121 HSPENYLHYSPLKHRVLLENNLLSDPNSDLLFTLHNTTPFGFTITRKSSGDVLFDTSPDT 180

Query: 169 ----TTLVFKDQYIQVSSSLPANRSSLYGLGE 252
               T LVFKDQYIQ+SS LP  RSSLYGLGE
Sbjct: 181 SNPDTFLVFKDQYIQLSSRLPIKRSSLYGLGE 212


>dbj|BAK05419.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 862

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/83 (51%), Positives = 62/83 (74%)
 Frame = +1

Query: 4   PPHQKKIYSPYNNQALAENYTVSIPESDLLLTINTTAFKFSVSRRSTGDILFETNTTLVF 183
           P H     S  +N ++  N T+S   SDL  TI+T  F+F+VSRRSTGD+LF+T+ TL+F
Sbjct: 94  PEHVLLDSSGMSNASMPGNSTMSSTSSDLTFTIHTAPFRFTVSRRSTGDVLFDTSATLIF 153

Query: 184 KDQYIQVSSSLPANRSSLYGLGE 252
           K++Y++++S+LPA R+SLYGLGE
Sbjct: 154 KNRYLELTSALPAQRASLYGLGE 176


>dbj|BAK06853.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 864

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/69 (59%), Positives = 58/69 (84%)
 Frame = +1

Query: 46  ALAENYTVSIPESDLLLTINTTAFKFSVSRRSTGDILFETNTTLVFKDQYIQVSSSLPAN 225
           ++  + T+S P SDL  TI+T+ F+F+VSRRST DILF+T+  LVFKD+Y++V+S+LPA+
Sbjct: 114 SMPSHNTMSSPSSDLNFTIHTSPFRFTVSRRSTHDILFDTSANLVFKDRYLEVTSALPAD 173

Query: 226 RSSLYGLGE 252
           R+SLYGLGE
Sbjct: 174 RASLYGLGE 182


>dbj|BAK06574.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 866

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/72 (55%), Positives = 57/72 (79%)
 Frame = +1

Query: 37  NNQALAENYTVSIPESDLLLTINTTAFKFSVSRRSTGDILFETNTTLVFKDQYIQVSSSL 216
           +N  L  + T+S   SDL  +I++  F+F+VSR STGDILF+T+ TLVFKD+Y++V+++L
Sbjct: 110 DNATLPSSATISRVSSDLKFSIHSNPFRFTVSRHSTGDILFDTSATLVFKDRYLEVTTAL 169

Query: 217 PANRSSLYGLGE 252
           PA R+SLYGLGE
Sbjct: 170 PAGRASLYGLGE 181


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