BLASTX nr result

ID: Coptis21_contig00026423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026423
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592693.1| F-box/LRR-repeat protein [Medicago truncatul...   183   1e-44
ref|XP_004163416.1| PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-re...   183   2e-44
ref|XP_004144867.1| PREDICTED: F-box/LRR-repeat protein 10-like ...   183   2e-44
emb|CBI37811.3| unnamed protein product [Vitis vinifera]              179   3e-43
ref|XP_003631565.1| PREDICTED: F-box/LRR-repeat protein 10-like ...   176   1e-42

>ref|XP_003592693.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|358345302|ref|XP_003636720.1| F-box/LRR-repeat
           protein [Medicago truncatula]
           gi|355481741|gb|AES62944.1| F-box/LRR-repeat protein
           [Medicago truncatula] gi|355502655|gb|AES83858.1|
           F-box/LRR-repeat protein [Medicago truncatula]
          Length = 643

 Score =  183 bits (465), Expect = 1e-44
 Identities = 92/149 (61%), Positives = 107/149 (71%)
 Frame = +1

Query: 64  LDLLPTALLASIMTKLDVPSICSAAATCKTFNACVSQILSFLPNFHLLDVAXXXXXXXXX 243
           LD LP ALLA+IMTKLDV SICS A T  TF +C   ILSFLPNFHL+DVA         
Sbjct: 9   LDQLPHALLATIMTKLDVASICSLATTASTFRSCAKHILSFLPNFHLIDVAPSGNLLTPL 68

Query: 244 XXXXXXXXXXKIDCSRLDDSSIDNLIRPSLHELCLHNCEDFTGDLISAIGKQCRDLRSLY 423
                     K+DC RLDDSSI  L++PSLHEL L+NC DF+G L+S IG QC+DLRSLY
Sbjct: 69  LPRNPYLKSLKVDCDRLDDSSISLLVKPSLHELSLYNCSDFSGKLLSEIGTQCKDLRSLY 128

Query: 424 LGSVAERRGHAIDVSDLEQLLGGCSLLEI 510
           LGSVAE+RG +I +SDLE+LL GCS LE+
Sbjct: 129 LGSVAEKRGRSIHISDLEELLTGCSQLEV 157


>ref|XP_004163416.1| PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-repeat protein 10-like
           [Cucumis sativus]
          Length = 637

 Score =  183 bits (464), Expect = 2e-44
 Identities = 87/148 (58%), Positives = 112/148 (75%)
 Frame = +1

Query: 64  LDLLPTALLASIMTKLDVPSICSAAATCKTFNACVSQILSFLPNFHLLDVAXXXXXXXXX 243
           LDLLP+A+LA+IMT LD+PSICS A+TC+TF++C SQIL+FLP FHLL+++         
Sbjct: 11  LDLLPSAVLATIMTNLDLPSICSLASTCRTFHSCASQILNFLPTFHLLEISPTVEFLRPL 70

Query: 244 XXXXXXXXXXKIDCSRLDDSSIDNLIRPSLHELCLHNCEDFTGDLISAIGKQCRDLRSLY 423
                     K+DC +LDDS+I  L++PSLHELCLHNC DF+G L+S IG  C+DLRSLY
Sbjct: 71  LPPNPFLRSLKVDCGQLDDSAIRLLLKPSLHELCLHNCADFSGKLLSEIGGCCKDLRSLY 130

Query: 424 LGSVAERRGHAIDVSDLEQLLGGCSLLE 507
           L SVAE+RG AI ++DLE+LL GC+ LE
Sbjct: 131 LSSVAEKRGRAIHIADLEELLSGCTQLE 158


>ref|XP_004144867.1| PREDICTED: F-box/LRR-repeat protein 10-like [Cucumis sativus]
          Length = 637

 Score =  183 bits (464), Expect = 2e-44
 Identities = 87/148 (58%), Positives = 112/148 (75%)
 Frame = +1

Query: 64  LDLLPTALLASIMTKLDVPSICSAAATCKTFNACVSQILSFLPNFHLLDVAXXXXXXXXX 243
           LDLLP+A+LA+IMT LD+PSICS A+TC+TF++C SQIL+FLP FHLL+++         
Sbjct: 11  LDLLPSAVLATIMTNLDLPSICSLASTCRTFHSCASQILNFLPTFHLLEISPTVEFLRPL 70

Query: 244 XXXXXXXXXXKIDCSRLDDSSIDNLIRPSLHELCLHNCEDFTGDLISAIGKQCRDLRSLY 423
                     K+DC +LDDS+I  L++PSLHELCLHNC DF+G L+S IG  C+DLRSLY
Sbjct: 71  LPPNPFLRSLKVDCGQLDDSAIRLLLKPSLHELCLHNCADFSGKLLSEIGGCCKDLRSLY 130

Query: 424 LGSVAERRGHAIDVSDLEQLLGGCSLLE 507
           L SVAE+RG AI ++DLE+LL GC+ LE
Sbjct: 131 LSSVAEKRGRAIHIADLEELLSGCTQLE 158


>emb|CBI37811.3| unnamed protein product [Vitis vinifera]
          Length = 1187

 Score =  179 bits (453), Expect = 3e-43
 Identities = 92/161 (57%), Positives = 116/161 (72%), Gaps = 1/161 (0%)
 Frame = +1

Query: 28   KEMVSNATEAGG-LDLLPTALLASIMTKLDVPSICSAAATCKTFNACVSQILSFLPNFHL 204
            +E ++N+  AGG L+ LP ALLA+IMTKLDV SI S A+TC T  +C SQI  FLPNFHL
Sbjct: 572  RERMANSEAAGGALEQLPAALLATIMTKLDVSSIRSLASTCTTIRSCASQIFHFLPNFHL 631

Query: 205  LDVAXXXXXXXXXXXXXXXXXXXKIDCSRLDDSSIDNLIRPSLHELCLHNCEDFTGDLIS 384
            LDVA                   K+DCS+LDDSSI++L+RPSLHE+ L NC DF+G L+S
Sbjct: 632  LDVALSINLLRPLLPPNPYLRSLKVDCSKLDDSSIEHLVRPSLHEISLLNCADFSGRLLS 691

Query: 385  AIGKQCRDLRSLYLGSVAERRGHAIDVSDLEQLLGGCSLLE 507
             IG QC+DLRSLYLG VAE+RG A+ +S+LE+LL GC+ L+
Sbjct: 692  LIGGQCKDLRSLYLGCVAEKRGRAVHISNLEELLCGCTELK 732


>ref|XP_003631565.1| PREDICTED: F-box/LRR-repeat protein 10-like [Vitis vinifera]
          Length = 640

 Score =  176 bits (447), Expect = 1e-42
 Identities = 91/158 (57%), Positives = 114/158 (72%), Gaps = 1/158 (0%)
 Frame = +1

Query: 37  VSNATEAGG-LDLLPTALLASIMTKLDVPSICSAAATCKTFNACVSQILSFLPNFHLLDV 213
           ++N+  AGG L+ LP ALLA+IMTKLDV SI S A+TC T  +C SQI  FLPNFHLLDV
Sbjct: 1   MANSEAAGGALEQLPAALLATIMTKLDVSSIRSLASTCTTIRSCASQIFHFLPNFHLLDV 60

Query: 214 AXXXXXXXXXXXXXXXXXXXKIDCSRLDDSSIDNLIRPSLHELCLHNCEDFTGDLISAIG 393
           A                   K+DCS+LDDSSI++L+RPSLHE+ L NC DF+G L+S IG
Sbjct: 61  ALSINLLRPLLPPNPYLRSLKVDCSKLDDSSIEHLVRPSLHEISLLNCADFSGRLLSLIG 120

Query: 394 KQCRDLRSLYLGSVAERRGHAIDVSDLEQLLGGCSLLE 507
            QC+DLRSLYLG VAE+RG A+ +S+LE+LL GC+ L+
Sbjct: 121 GQCKDLRSLYLGCVAEKRGRAVHISNLEELLCGCTELK 158


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