BLASTX nr result
ID: Coptis21_contig00026423
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00026423 (529 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003592693.1| F-box/LRR-repeat protein [Medicago truncatul... 183 1e-44 ref|XP_004163416.1| PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-re... 183 2e-44 ref|XP_004144867.1| PREDICTED: F-box/LRR-repeat protein 10-like ... 183 2e-44 emb|CBI37811.3| unnamed protein product [Vitis vinifera] 179 3e-43 ref|XP_003631565.1| PREDICTED: F-box/LRR-repeat protein 10-like ... 176 1e-42 >ref|XP_003592693.1| F-box/LRR-repeat protein [Medicago truncatula] gi|358345302|ref|XP_003636720.1| F-box/LRR-repeat protein [Medicago truncatula] gi|355481741|gb|AES62944.1| F-box/LRR-repeat protein [Medicago truncatula] gi|355502655|gb|AES83858.1| F-box/LRR-repeat protein [Medicago truncatula] Length = 643 Score = 183 bits (465), Expect = 1e-44 Identities = 92/149 (61%), Positives = 107/149 (71%) Frame = +1 Query: 64 LDLLPTALLASIMTKLDVPSICSAAATCKTFNACVSQILSFLPNFHLLDVAXXXXXXXXX 243 LD LP ALLA+IMTKLDV SICS A T TF +C ILSFLPNFHL+DVA Sbjct: 9 LDQLPHALLATIMTKLDVASICSLATTASTFRSCAKHILSFLPNFHLIDVAPSGNLLTPL 68 Query: 244 XXXXXXXXXXKIDCSRLDDSSIDNLIRPSLHELCLHNCEDFTGDLISAIGKQCRDLRSLY 423 K+DC RLDDSSI L++PSLHEL L+NC DF+G L+S IG QC+DLRSLY Sbjct: 69 LPRNPYLKSLKVDCDRLDDSSISLLVKPSLHELSLYNCSDFSGKLLSEIGTQCKDLRSLY 128 Query: 424 LGSVAERRGHAIDVSDLEQLLGGCSLLEI 510 LGSVAE+RG +I +SDLE+LL GCS LE+ Sbjct: 129 LGSVAEKRGRSIHISDLEELLTGCSQLEV 157 >ref|XP_004163416.1| PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-repeat protein 10-like [Cucumis sativus] Length = 637 Score = 183 bits (464), Expect = 2e-44 Identities = 87/148 (58%), Positives = 112/148 (75%) Frame = +1 Query: 64 LDLLPTALLASIMTKLDVPSICSAAATCKTFNACVSQILSFLPNFHLLDVAXXXXXXXXX 243 LDLLP+A+LA+IMT LD+PSICS A+TC+TF++C SQIL+FLP FHLL+++ Sbjct: 11 LDLLPSAVLATIMTNLDLPSICSLASTCRTFHSCASQILNFLPTFHLLEISPTVEFLRPL 70 Query: 244 XXXXXXXXXXKIDCSRLDDSSIDNLIRPSLHELCLHNCEDFTGDLISAIGKQCRDLRSLY 423 K+DC +LDDS+I L++PSLHELCLHNC DF+G L+S IG C+DLRSLY Sbjct: 71 LPPNPFLRSLKVDCGQLDDSAIRLLLKPSLHELCLHNCADFSGKLLSEIGGCCKDLRSLY 130 Query: 424 LGSVAERRGHAIDVSDLEQLLGGCSLLE 507 L SVAE+RG AI ++DLE+LL GC+ LE Sbjct: 131 LSSVAEKRGRAIHIADLEELLSGCTQLE 158 >ref|XP_004144867.1| PREDICTED: F-box/LRR-repeat protein 10-like [Cucumis sativus] Length = 637 Score = 183 bits (464), Expect = 2e-44 Identities = 87/148 (58%), Positives = 112/148 (75%) Frame = +1 Query: 64 LDLLPTALLASIMTKLDVPSICSAAATCKTFNACVSQILSFLPNFHLLDVAXXXXXXXXX 243 LDLLP+A+LA+IMT LD+PSICS A+TC+TF++C SQIL+FLP FHLL+++ Sbjct: 11 LDLLPSAVLATIMTNLDLPSICSLASTCRTFHSCASQILNFLPTFHLLEISPTVEFLRPL 70 Query: 244 XXXXXXXXXXKIDCSRLDDSSIDNLIRPSLHELCLHNCEDFTGDLISAIGKQCRDLRSLY 423 K+DC +LDDS+I L++PSLHELCLHNC DF+G L+S IG C+DLRSLY Sbjct: 71 LPPNPFLRSLKVDCGQLDDSAIRLLLKPSLHELCLHNCADFSGKLLSEIGGCCKDLRSLY 130 Query: 424 LGSVAERRGHAIDVSDLEQLLGGCSLLE 507 L SVAE+RG AI ++DLE+LL GC+ LE Sbjct: 131 LSSVAEKRGRAIHIADLEELLSGCTQLE 158 >emb|CBI37811.3| unnamed protein product [Vitis vinifera] Length = 1187 Score = 179 bits (453), Expect = 3e-43 Identities = 92/161 (57%), Positives = 116/161 (72%), Gaps = 1/161 (0%) Frame = +1 Query: 28 KEMVSNATEAGG-LDLLPTALLASIMTKLDVPSICSAAATCKTFNACVSQILSFLPNFHL 204 +E ++N+ AGG L+ LP ALLA+IMTKLDV SI S A+TC T +C SQI FLPNFHL Sbjct: 572 RERMANSEAAGGALEQLPAALLATIMTKLDVSSIRSLASTCTTIRSCASQIFHFLPNFHL 631 Query: 205 LDVAXXXXXXXXXXXXXXXXXXXKIDCSRLDDSSIDNLIRPSLHELCLHNCEDFTGDLIS 384 LDVA K+DCS+LDDSSI++L+RPSLHE+ L NC DF+G L+S Sbjct: 632 LDVALSINLLRPLLPPNPYLRSLKVDCSKLDDSSIEHLVRPSLHEISLLNCADFSGRLLS 691 Query: 385 AIGKQCRDLRSLYLGSVAERRGHAIDVSDLEQLLGGCSLLE 507 IG QC+DLRSLYLG VAE+RG A+ +S+LE+LL GC+ L+ Sbjct: 692 LIGGQCKDLRSLYLGCVAEKRGRAVHISNLEELLCGCTELK 732 >ref|XP_003631565.1| PREDICTED: F-box/LRR-repeat protein 10-like [Vitis vinifera] Length = 640 Score = 176 bits (447), Expect = 1e-42 Identities = 91/158 (57%), Positives = 114/158 (72%), Gaps = 1/158 (0%) Frame = +1 Query: 37 VSNATEAGG-LDLLPTALLASIMTKLDVPSICSAAATCKTFNACVSQILSFLPNFHLLDV 213 ++N+ AGG L+ LP ALLA+IMTKLDV SI S A+TC T +C SQI FLPNFHLLDV Sbjct: 1 MANSEAAGGALEQLPAALLATIMTKLDVSSIRSLASTCTTIRSCASQIFHFLPNFHLLDV 60 Query: 214 AXXXXXXXXXXXXXXXXXXXKIDCSRLDDSSIDNLIRPSLHELCLHNCEDFTGDLISAIG 393 A K+DCS+LDDSSI++L+RPSLHE+ L NC DF+G L+S IG Sbjct: 61 ALSINLLRPLLPPNPYLRSLKVDCSKLDDSSIEHLVRPSLHEISLLNCADFSGRLLSLIG 120 Query: 394 KQCRDLRSLYLGSVAERRGHAIDVSDLEQLLGGCSLLE 507 QC+DLRSLYLG VAE+RG A+ +S+LE+LL GC+ L+ Sbjct: 121 GQCKDLRSLYLGCVAEKRGRAVHISNLEELLCGCTELK 158