BLASTX nr result

ID: Coptis21_contig00026419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026419
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318079.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002278890.1| PREDICTED: uncharacterized protein LOC100257...    95   7e-18
ref|XP_002511375.1| conserved hypothetical protein [Ricinus comm...    92   3e-17
ref|XP_002322173.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002877602.1| hypothetical protein ARALYDRAFT_323421 [Arab...    78   7e-13

>ref|XP_002318079.1| predicted protein [Populus trichocarpa] gi|222858752|gb|EEE96299.1|
            predicted protein [Populus trichocarpa]
          Length = 1083

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/93 (51%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
 Frame = +1

Query: 34   GEAAASTDQYRTPGTRSSGTVEKPWLKQLRELAKASFSKE-TRAQHDPSSSQTRRSGFWT 210
            GE  +S D+ +  G++ SG  +KPW KQLRELA+ASFSKE + +Q DPS+S+T+ SGFWT
Sbjct: 991  GETGSSVDRNKISGSKGSGKPDKPWQKQLRELARASFSKERSGSQKDPSTSRTKWSGFWT 1050

Query: 211  GKRXXXXXXXXXADFKSKPRALYRDLEAIFSSR 309
             K          +D KSKP  LY+DLE IF+S+
Sbjct: 1051 NKWSGSSSQKTSSDLKSKPNQLYKDLEDIFASK 1083


>ref|XP_002278890.1| PREDICTED: uncharacterized protein LOC100257111 [Vitis vinifera]
          Length = 1087

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 51/111 (45%), Positives = 66/111 (59%), Gaps = 15/111 (13%)
 Frame = +1

Query: 22   DGDTGEAAASTDQYRTPGTRSSGTVEKPWLKQLRELAKASFSKE---------------T 156
            DG+TG+A +S D+ ++ G+ +  T ++PWLKQLRELAKASFSKE               +
Sbjct: 977  DGETGDATSSADRSKSSGSGTVRTSDRPWLKQLRELAKASFSKEGSGVPTDPSTSQSRWS 1036

Query: 157  RAQHDPSSSQTRRSGFWTGKRXXXXXXXXXADFKSKPRALYRDLEAIFSSR 309
                DPSS+ TR SGFW  KR          D KSKPR LY+DLE IF+ +
Sbjct: 1037 AVATDPSSTHTRWSGFWGAKRGGSSSVSSSHDLKSKPRELYKDLETIFTPK 1087


>ref|XP_002511375.1| conserved hypothetical protein [Ricinus communis]
            gi|223550490|gb|EEF51977.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1087

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
 Frame = +1

Query: 34   GEAAASTDQYRTPGTRSSGTVEKPWLKQLRELAKASFSKETR-AQHDPSSSQTRRSGFWT 210
            GE+ +S D+ ++ G+ +S T +KPW KQLRE+AKASFS E   A  DPS+S+T+ SGFW 
Sbjct: 995  GESGSSADRNKSSGSGTSSTPDKPWQKQLREMAKASFSTENSGAPIDPSTSRTKWSGFWA 1054

Query: 211  GKRXXXXXXXXXADFKSKPRALYRDLEAIFSSR 309
             K          +DFK KP  LY+DLEAIF+S+
Sbjct: 1055 AKSSGESSNNSSSDFKLKPSRLYKDLEAIFASK 1087


>ref|XP_002322173.1| predicted protein [Populus trichocarpa] gi|222869169|gb|EEF06300.1|
            predicted protein [Populus trichocarpa]
          Length = 937

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
 Frame = +1

Query: 7    SKHCSDGDTG-EAAASTDQYRTPGTRSSGTVEKPWLKQLRELAKASFSKE-TRAQHDPSS 180
            +K  SDG TG EA +S D+ ++ G  S GT +KPW KQLRELA+ASF+KE + +++DPS+
Sbjct: 837  AKRRSDGGTGGEAGSSVDRNKSSG--SPGTPDKPWQKQLRELARASFTKERSGSRNDPST 894

Query: 181  SQTRRSGFWTGKRXXXXXXXXXADFKSKPRALYRDLEAIFSSR 309
            S+T+ SG WT KR          D KSK + LY DLE IF+S+
Sbjct: 895  SRTKWSGIWTNKRSGSSSQKTSPDSKSKTKWLYEDLEEIFASK 937


>ref|XP_002877602.1| hypothetical protein ARALYDRAFT_323421 [Arabidopsis lyrata subsp.
            lyrata] gi|297323440|gb|EFH53861.1| hypothetical protein
            ARALYDRAFT_323421 [Arabidopsis lyrata subsp. lyrata]
          Length = 1968

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/103 (38%), Positives = 67/103 (65%), Gaps = 7/103 (6%)
 Frame = +1

Query: 22   DGDTGEAAASTDQYR---TPGTRSSGTVEKPWLKQLRELAKASFSKE---TRAQHDPSSS 183
            +G +     +T ++R   + G+RSSG+++KPWLKQ+RE+AK+SF+++   ++   DPS S
Sbjct: 881  EGRSSSNGGTTPEFRYRNSSGSRSSGSLDKPWLKQIREMAKSSFTRDRSNSKVPSDPSCS 940

Query: 184  QTR-RSGFWTGKRXXXXXXXXXADFKSKPRALYRDLEAIFSSR 309
            ++   S  W  K          +D+KS+P+ LY+DLEAIF+S+
Sbjct: 941  KSGWSSSIWGTKTSGSSSKESSSDYKSRPKGLYKDLEAIFASK 983


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