BLASTX nr result

ID: Coptis21_contig00026417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026417
         (1069 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27683.3| unnamed protein product [Vitis vinifera]              258   1e-66
ref|XP_002271512.1| PREDICTED: uncharacterized protein LOC100266...   256   9e-66
emb|CAN72196.1| hypothetical protein VITISV_014980 [Vitis vinifera]   256   9e-66
ref|XP_002514886.1| conserved hypothetical protein [Ricinus comm...   238   2e-60
ref|XP_002299323.1| predicted protein [Populus trichocarpa] gi|2...   230   5e-58

>emb|CBI27683.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  258 bits (660), Expect = 1e-66
 Identities = 161/354 (45%), Positives = 217/354 (61%), Gaps = 27/354 (7%)
 Frame = +2

Query: 2    LDEQEYYQKYFNGSRPLKSQKENLLHKSFTG---SVEGDQDYFEDESSDIESEYFNGLLT 172
            LD+Q+YY K   G++PL+ Q++  L KSF G   + E ++D FE+ESS   SE F+G L 
Sbjct: 29   LDDQQYYPKSNYGTKPLR-QRDYYLRKSFAGLEAAREEEEDDFEEESSAAISELFHGFLA 87

Query: 173  IGTFGSXXXXXXXXXXXXXXXXXXSVSEKETNVTENDLRLINEELEKVLAADVKEEKWTD 352
            IGT GS                  +++EKET VTEN+L+LIN+ELEKVL A+ KE+ ++ 
Sbjct: 88   IGTLGSDPVVNDPSTPTFAISVE-NITEKETEVTENELKLINDELEKVLGAEAKEDGYSS 146

Query: 353  ------SSGRTSHVSTITLSG-----TDGIANGSSVCPLQEYLFGSRVELPQLATVAKKE 499
                  S+GR+SH STITLSG     T+   NG++VCPLQ YLFGS +ELP+  TVAKKE
Sbjct: 147  GRNSHVSTGRSSHGSTITLSGKPMEGTESNGNGTTVCPLQGYLFGSAIELPETTTVAKKE 206

Query: 500  NRTSLGELFQKTRVGE-----EMGDNXXXXXXXXXXXXXXXXILKRMILGSSS------- 643
            +RTSLGELFQ+++        E G+                 +LK+ +L +SS       
Sbjct: 207  HRTSLGELFQRSKEENSGAKCERGEKRTDKEADKSAVHIMKKMLKKKMLHASSRNSTAAG 266

Query: 644  AAADSIAVETKLNKLLQMFHRKVHPEDSTTPKKCSKPNKTDMKNHIPHDGGGSNYSREHT 823
               DS + ETKL+K+L MFHRKVHPE ST  +K ++P+K ++KN I +DGG +N  R   
Sbjct: 267  GTVDSASAETKLHKILHMFHRKVHPESSTATEKPNRPHKNEIKNGIFYDGGCNNGDR--M 324

Query: 824  LPDEDSTSIHKISVSKERV-RHKSHLNTPHVADTRSDSSGSGNREYWIKTDADY 982
            LPDED     + ++SKE + R+KS  N P      +DS  +GNREYWIKTDADY
Sbjct: 325  LPDEDIMIFPQRTLSKESIRRYKSQSNPPQFTLCGNDS--NGNREYWIKTDADY 376


>ref|XP_002271512.1| PREDICTED: uncharacterized protein LOC100266157 [Vitis vinifera]
          Length = 428

 Score =  256 bits (653), Expect = 9e-66
 Identities = 160/353 (45%), Positives = 216/353 (61%), Gaps = 27/353 (7%)
 Frame = +2

Query: 2    LDEQEYYQKYFNGSRPLKSQKENLLHKSFTG---SVEGDQDYFEDESSDIESEYFNGLLT 172
            LD+Q+YY K   G++PL+ Q++  L KSF G   + E ++D FE+ESS   SE F+G L 
Sbjct: 65   LDDQQYYPKSNYGTKPLR-QRDYYLRKSFAGLEAAREEEEDDFEEESSAAISELFHGFLA 123

Query: 173  IGTFGSXXXXXXXXXXXXXXXXXXSVSEKETNVTENDLRLINEELEKVLAADVKEEKWTD 352
            IGT GS                  +++EKET VTEN+L+LIN+ELEKVL A+ KE+ ++ 
Sbjct: 124  IGTLGSDPVVNDPSTPTFAISVE-NITEKETEVTENELKLINDELEKVLGAEAKEDGYSS 182

Query: 353  ------SSGRTSHVSTITLSG-----TDGIANGSSVCPLQEYLFGSRVELPQLATVAKKE 499
                  S+GR+SH STITLSG     T+   NG++VCPLQ YLFGS +ELP+  TVAKKE
Sbjct: 183  GRNSHVSTGRSSHGSTITLSGKPMEGTESNGNGTTVCPLQGYLFGSAIELPETTTVAKKE 242

Query: 500  NRTSLGELFQKTRVGE-----EMGDNXXXXXXXXXXXXXXXXILKRMILGSSS------- 643
            +RTSLGELFQ+++        E G+                 +LK+ +L +SS       
Sbjct: 243  HRTSLGELFQRSKEENSGAKCERGEKRTDKEADKSAVHIMKKMLKKKMLHASSRNSTAAG 302

Query: 644  AAADSIAVETKLNKLLQMFHRKVHPEDSTTPKKCSKPNKTDMKNHIPHDGGGSNYSREHT 823
               DS + ETKL+K+L MFHRKVHPE ST  +K ++P+K ++KN I +DGG +N  R   
Sbjct: 303  GTVDSASAETKLHKILHMFHRKVHPESSTATEKPNRPHKNEIKNGIFYDGGCNNGDR--M 360

Query: 824  LPDEDSTSIHKISVSKERV-RHKSHLNTPHVADTRSDSSGSGNREYWIKTDAD 979
            LPDED     + ++SKE + R+KS  N P      +DS  +GNREYWIKTDAD
Sbjct: 361  LPDEDIMIFPQRTLSKESIRRYKSQSNPPQFTLCGNDS--NGNREYWIKTDAD 411


>emb|CAN72196.1| hypothetical protein VITISV_014980 [Vitis vinifera]
          Length = 458

 Score =  256 bits (653), Expect = 9e-66
 Identities = 160/353 (45%), Positives = 216/353 (61%), Gaps = 27/353 (7%)
 Frame = +2

Query: 2    LDEQEYYQKYFNGSRPLKSQKENLLHKSFTG---SVEGDQDYFEDESSDIESEYFNGLLT 172
            LD+Q+YY K   G++PL+ Q++  L KSF G   + E ++D FE+ESS   SE F+G L 
Sbjct: 95   LDDQQYYPKSNYGTKPLR-QRDYYLRKSFAGLEAAREEEEDDFEEESSAAISELFHGFLA 153

Query: 173  IGTFGSXXXXXXXXXXXXXXXXXXSVSEKETNVTENDLRLINEELEKVLAADVKEEKWTD 352
            IGT GS                  +++EKET VTEN+L+LIN+ELEKVL A+ KE+ ++ 
Sbjct: 154  IGTLGSDPVVNDPSTPTFAISVE-NITEKETEVTENELKLINDELEKVLGAEAKEDGYSS 212

Query: 353  ------SSGRTSHVSTITLSG-----TDGIANGSSVCPLQEYLFGSRVELPQLATVAKKE 499
                  S+GR+SH STITLSG     T+   NG++VCPLQ YLFGS +ELP+  TVAKKE
Sbjct: 213  GRNSHVSTGRSSHGSTITLSGKPMEGTESNGNGTTVCPLQGYLFGSAIELPETTTVAKKE 272

Query: 500  NRTSLGELFQKTRVGE-----EMGDNXXXXXXXXXXXXXXXXILKRMILGSSS------- 643
            +RTSLGELFQ+++        E G+                 +LK+ +L +SS       
Sbjct: 273  HRTSLGELFQRSKEENSGAKCERGEKRTDKEADKSAVHIMKKMLKKKMLHASSRNSTAAG 332

Query: 644  AAADSIAVETKLNKLLQMFHRKVHPEDSTTPKKCSKPNKTDMKNHIPHDGGGSNYSREHT 823
               DS + ETKL+K+L MFHRKVHPE ST  +K ++P+K ++KN I +DGG +N  R   
Sbjct: 333  GTVDSASAETKLHKILHMFHRKVHPESSTATEKPNRPHKNEIKNGIFYDGGCNNGDR--M 390

Query: 824  LPDEDSTSIHKISVSKERV-RHKSHLNTPHVADTRSDSSGSGNREYWIKTDAD 979
            LPDED     + ++SKE + R+KS  N P      +DS  +GNREYWIKTDAD
Sbjct: 391  LPDEDIMIFPQRTLSKESIRRYKSQSNPPQFTLCGNDS--NGNREYWIKTDAD 441


>ref|XP_002514886.1| conserved hypothetical protein [Ricinus communis]
            gi|223545937|gb|EEF47440.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 388

 Score =  238 bits (607), Expect = 2e-60
 Identities = 154/362 (42%), Positives = 202/362 (55%), Gaps = 35/362 (9%)
 Frame = +2

Query: 2    LDEQEYYQKYFNGSRPLKSQKENLLHKSFTGSV-----EGDQDYFEDESSDIESEYFNGL 166
            LD+Q YY K   G+R  K  ++  L KSF G       E +++ +E+ESS   SE F+G 
Sbjct: 31   LDDQHYYPKPNYGARSYKQAQKEHLRKSFAGMEAARIEEEEEEDYEEESSAAISELFHGF 90

Query: 167  LTIGTFGSXXXXXXXXXXXXXXXXXXSVSEKETNVTENDLRLINEELEKVLAADVKEEKW 346
            L IGT GS                  +++EKET VTEN+L+LIN+ELEKVL A+ +E+  
Sbjct: 91   LAIGTLGSEPVHTNPSTPTFAISVE-NITEKETEVTENELKLINDELEKVLGAEAREDYC 149

Query: 347  TDSSGRTSHVS--------TITLSGTD---GIANGSSVCPLQEYLFGSRVELPQLATVAK 493
             DSSGR S+VS        TITLSG        NG++VCPLQ YLFGS +EL +  T AK
Sbjct: 150  NDSSGRNSYVSAGRSSHGSTITLSGKPMEGQETNGTTVCPLQGYLFGSAIELSETTTAAK 209

Query: 494  KENRTSLGELFQKTRVGE-------EMGDNXXXXXXXXXXXXXXXXILKRMIL------- 631
            KENRTSLGELFQ++++ E       E  +                 +LK+ +L       
Sbjct: 210  KENRTSLGELFQRSKIAEENFGGKYERDEKRMEKEADKSAVHLMKKMLKKKMLHASSRNS 269

Query: 632  -GSSSAAADSIAVETKLNKLLQMFHRKVHPEDSTTPKKCSKPNKTDMK---NHIPHDGGG 799
             GS     DS + ETKL+K+L MFHRKVHPE ST+ +K  KP K D K   N+  H+ GG
Sbjct: 270  TGSGGGTVDSASAETKLHKILHMFHRKVHPESSTSTQKADKPQKNDNKKNANNAGHNNGG 329

Query: 800  SNYSREHTLPDEDSTSIHKISVSKERV-RHKSHLNTPHVADTRSDSSGSGNREYWIKTDA 976
                    LPDE+ T + + ++SK  + R+KS  N P    T S S  +G+RE WIKTDA
Sbjct: 330  ------QMLPDEEITVLPQRALSKRSIRRYKSQSNPPQF--TLSSSESNGSRECWIKTDA 381

Query: 977  DY 982
            DY
Sbjct: 382  DY 383


>ref|XP_002299323.1| predicted protein [Populus trichocarpa] gi|222846581|gb|EEE84128.1|
            predicted protein [Populus trichocarpa]
          Length = 384

 Score =  230 bits (586), Expect = 5e-58
 Identities = 158/359 (44%), Positives = 199/359 (55%), Gaps = 32/359 (8%)
 Frame = +2

Query: 2    LDEQEYYQKYFNGSRPLKSQKENLLHKSFTG-------SVEGDQDY-FEDESSDIESEYF 157
            LD+Q+YY K   G+R  +  ++  L KSF G         EG+++  FE+ESS   SE F
Sbjct: 31   LDDQQYYTKPNYGTRTFRQAQKEHLRKSFAGLEAARVEEEEGEEEEDFEEESSAAISELF 90

Query: 158  NGLLTIGTFGSXXXXXXXXXXXXXXXXXXSVSEKETNVTENDLRLINEELEKVLAADVKE 337
            +G L IGT GS                  +++EKET VTEN+L+LIN+ELEKVLA D   
Sbjct: 91   HGFLAIGTLGSEPVNTDPSTPTFPISVE-NITEKETEVTENELKLINDELEKVLAEDCSN 149

Query: 338  EKWTDSSGRTSHVS--------TITLSGTDGIANGSS-VCPLQEYLFGSRVELPQLATVA 490
                DSSGR SHVS        TITLSG       S+ VCPLQ YLFGS +EL + A VA
Sbjct: 150  ----DSSGRNSHVSAGRSSHGSTITLSGKPMEGRDSNAVCPLQGYLFGSAIELSETAPVA 205

Query: 491  KKENRTSLGELFQKTRVGE-------EMGDNXXXXXXXXXXXXXXXXILKRMILGSSS-- 643
            KKE+RTSLGELFQKT++ E       E  +                 ILK+ +L +SS  
Sbjct: 206  KKEHRTSLGELFQKTKIAEENYGVKFEREEKRVEKEADKSAVNLMKKILKKKMLHASSRS 265

Query: 644  ------AAADSIAVETKLNKLLQMFHRKVHPEDSTTPKKCSKPNKTDMKNHIPHDGGGSN 805
                  A  DS + ETKL+K+L MFHRKVHPE ST+ +K  KP KT+ K    ++ GG+N
Sbjct: 266  STSAGGATVDSASAETKLHKILHMFHRKVHPESSTSTRKADKPPKTENKK--SNNNGGNN 323

Query: 806  YSREHTLPDEDSTSIHKISVSKERVRHKSHLNTPHVADTRSDSSGSGNREYWIKTDADY 982
               +  L DED T + +    +   R KS  N PH   T  DS+GS  RE WIKTDADY
Sbjct: 324  NGGQMLL-DEDITIVPRTLSKRSIRRFKSQSNPPHFMFTGCDSNGS--RECWIKTDADY 379


Top