BLASTX nr result

ID: Coptis21_contig00026414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026414
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28600.3| unnamed protein product [Vitis vinifera]              110   1e-22
ref|XP_002271203.1| PREDICTED: putative disease resistance prote...   110   1e-22
emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera]   110   1e-22
ref|XP_002516740.1| leucine-rich repeat containing protein, puta...   108   5e-22
ref|XP_002530393.1| leucine-rich repeat containing protein, puta...   102   4e-20

>emb|CBI28600.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/163 (36%), Positives = 92/163 (56%)
 Frame = -2

Query: 491 IRKQEVILLWMANGFVHSKEGRQLEDIGSEIFVSLLWRSFFQDVGKDEDGNIVWCKMHDL 312
           I K+ ++ LWMA GF+ S   +  E++G+E F  LLWRSFF++V KD DGNIV C MH L
Sbjct: 302 IEKENLVQLWMAEGFLPSSGRKAPEEVGNEYFNELLWRSFFENVTKDSDGNIVKCGMHHL 361

Query: 311 VHDLACSIMVNECRNIELGKFKSTPRCTRYLSLTMDDASSATTIESISGSSLSLRTLILL 132
            HDLA S+  ++C  +E+G+  S P  TR++S+   +         ++     +R+ +LL
Sbjct: 362 FHDLARSVSGSDCSAVEVGRQVSIPAATRHISMVCKEREFVIPKSLLNAG--KVRSFLLL 419

Query: 131 DHTNIGRSLEFDFCTRFMSLRAMSLEVFGLVTIPDSIGDLEHL 3
                   +  +F + F SLRA+ +       +  SIG L+HL
Sbjct: 420 VGWQKIPKVSHNFISSFKSLRALDISSTRAKKLSKSIGALKHL 462


>ref|XP_002271203.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 1179

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/163 (36%), Positives = 92/163 (56%)
 Frame = -2

Query: 491 IRKQEVILLWMANGFVHSKEGRQLEDIGSEIFVSLLWRSFFQDVGKDEDGNIVWCKMHDL 312
           I K+ ++ LWMA GF+ S   +  E++G+E F  LLWRSFF++V KD DGNIV C MH L
Sbjct: 437 IEKENLVQLWMAEGFLPSSGRKAPEEVGNEYFNELLWRSFFENVTKDSDGNIVKCGMHHL 496

Query: 311 VHDLACSIMVNECRNIELGKFKSTPRCTRYLSLTMDDASSATTIESISGSSLSLRTLILL 132
            HDLA S+  ++C  +E+G+  S P  TR++S+   +         ++     +R+ +LL
Sbjct: 497 FHDLARSVSGSDCSAVEVGRQVSIPAATRHISMVCKEREFVIPKSLLNAG--KVRSFLLL 554

Query: 131 DHTNIGRSLEFDFCTRFMSLRAMSLEVFGLVTIPDSIGDLEHL 3
                   +  +F + F SLRA+ +       +  SIG L+HL
Sbjct: 555 VGWQKIPKVSHNFISSFKSLRALDISSTRAKKLSKSIGALKHL 597


>emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera]
          Length = 1697

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/163 (36%), Positives = 92/163 (56%)
 Frame = -2

Query: 491 IRKQEVILLWMANGFVHSKEGRQLEDIGSEIFVSLLWRSFFQDVGKDEDGNIVWCKMHDL 312
           I K+ ++ LWMA GF+ S   +  E++G+E F  LLWRSFF++V KD DGNIV C MH L
Sbjct: 437 IEKENLVQLWMAEGFLPSSGRKAPEEVGNEYFNELLWRSFFENVTKDSDGNIVKCGMHHL 496

Query: 311 VHDLACSIMVNECRNIELGKFKSTPRCTRYLSLTMDDASSATTIESISGSSLSLRTLILL 132
            HDLA S+  ++C  +E+G+  S P  TR++S+   +         ++     +R+ +LL
Sbjct: 497 FHDLARSVSGSDCSAVEVGRQVSIPAATRHISMVCKEREFVIPKSLLNAG--KVRSFLLL 554

Query: 131 DHTNIGRSLEFDFCTRFMSLRAMSLEVFGLVTIPDSIGDLEHL 3
                   +  +F + F SLRA+ +       +  SIG L+HL
Sbjct: 555 VGWQKIPKVSHNFISSFKSLRALDISSTRAKKLSKSIGALKHL 597


>ref|XP_002516740.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223544113|gb|EEF45638.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1104

 Score =  108 bits (270), Expect = 5e-22
 Identities = 66/164 (40%), Positives = 96/164 (58%), Gaps = 1/164 (0%)
 Frame = -2

Query: 491 IRKQEVILLWMANGFVHSKEGRQLEDIGSEIFVSLLWRSFFQDVGKDEDGNIVWCKMHDL 312
           I+K+++I LWMANGF+  +    L D G EIF  L+WRSF QDV +D  GN   CKMHDL
Sbjct: 432 IKKEKLIELWMANGFIPCQGKMDLHDKGHEIFYELVWRSFLQDVEEDRLGNTT-CKMHDL 490

Query: 311 VHDLACSIMVNECRNIELGKFKSTPRCTRYLSLTMDDASSATTIESISGSSL-SLRTLIL 135
           +HDLA S+M++EC+ IE  K    P+  R+LS+  D   S    +SI+   + SLR+ + 
Sbjct: 491 IHDLAQSMMIDECKLIEPNKVLHVPKMVRHLSICWDSEQSFP--QSINLCKIHSLRSFLW 548

Query: 134 LDHTNIGRSLEFDFCTRFMSLRAMSLEVFGLVTIPDSIGDLEHL 3
           +D+      +   +  +   LR + L  + L  +P SI  L+HL
Sbjct: 549 IDYGYRDDQVS-SYLFKQKHLRVLDLLNYHLQKLPMSIDRLKHL 591


>ref|XP_002530393.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223530079|gb|EEF31999.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 934

 Score =  102 bits (253), Expect = 4e-20
 Identities = 70/167 (41%), Positives = 93/167 (55%), Gaps = 3/167 (1%)
 Frame = -2

Query: 494 IIRKQEVILLWMANGFVHSKEGRQLEDIGSEIFVSLLWRSFFQDVGKDEDGNIVWCKMHD 315
           ++ K ++I LWMA+GF+  K    L D G EIF  L++RSFFQDV +D  GN   CKMHD
Sbjct: 384 LMEKDKLIGLWMASGFIPCKGQMDLHDKGQEIFSELVFRSFFQDVKEDFLGNKT-CKMHD 442

Query: 314 LVHDLACSIMVNECRNIELGKFKSTPRCTRYLSLTMDDASSATTIESISGSSLSLRTLIL 135
           LVHDLA SIM  ECR IE  K     +  R+LS+  D    + +  +     LSLR++IL
Sbjct: 443 LVHDLAKSIMEEECRLIEPNKILEGSKRVRHLSIYWDSDLLSFSHSNNGFKDLSLRSIIL 502

Query: 134 LDHTNIG-RSLEFDFCTRFMSLRAMSLEVFGLV--TIPDSIGDLEHL 3
           +     G R+  F    +   LR + L   GL    +P SI  L+HL
Sbjct: 503 VTRCPGGLRTFSFHLSGQ-KHLRILDLSSNGLFWDKLPKSIDGLKHL 548


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