BLASTX nr result
ID: Coptis21_contig00026401
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00026401 (427 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAD54682.1| pentatricopeptide (PPR) repeat-containing protei... 189 2e-46 ref|NP_001064003.1| Os09g0573000 [Oryza sativa Japonica Group] g... 189 2e-46 ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containi... 186 1e-45 ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containi... 178 4e-43 emb|CAN67095.1| hypothetical protein VITISV_016806 [Vitis vinifera] 178 4e-43 >dbj|BAD54682.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa Japonica Group] Length = 381 Score = 189 bits (481), Expect = 2e-46 Identities = 89/140 (63%), Positives = 117/140 (83%) Frame = +3 Query: 6 VDEVRNSMKELGIKKSPGSSLIELDGDVHEFVAGDRSHHQTNKINMMLDEIARLLSLEGH 185 V EVR+SMK+ I K PGSS++ELDG V+EF++GD SH Q+++I MLDEI + LSL+GH Sbjct: 231 VQEVRSSMKQHRIHKPPGSSVVELDGVVYEFLSGDHSHPQSDQIYAMLDEIGKTLSLKGH 290 Query: 186 VPTVKGIPYDIDEEEKEQALSQHSEKLAVAFGLINTKQGTPLRIVKNLRVCEDCHSAMKL 365 P K + +DIDEE+KE +SQHSEKLAVAFGLINT++G +RIVKNLR+CEDCHS MK+ Sbjct: 291 KPATKLVTFDIDEEDKEVCISQHSEKLAVAFGLINTRRGAVIRIVKNLRICEDCHSVMKV 350 Query: 366 ISKVFNWLIVIRDRSRFHHF 425 +S+V++ +IV+RDR+RFHHF Sbjct: 351 VSEVYDRVIVVRDRNRFHHF 370 >ref|NP_001064003.1| Os09g0573000 [Oryza sativa Japonica Group] gi|113632236|dbj|BAF25917.1| Os09g0573000 [Oryza sativa Japonica Group] Length = 555 Score = 189 bits (481), Expect = 2e-46 Identities = 89/140 (63%), Positives = 117/140 (83%) Frame = +3 Query: 6 VDEVRNSMKELGIKKSPGSSLIELDGDVHEFVAGDRSHHQTNKINMMLDEIARLLSLEGH 185 V EVR+SMK+ I K PGSS++ELDG V+EF++GD SH Q+++I MLDEI + LSL+GH Sbjct: 405 VQEVRSSMKQHRIHKPPGSSVVELDGVVYEFLSGDHSHPQSDQIYAMLDEIGKTLSLKGH 464 Query: 186 VPTVKGIPYDIDEEEKEQALSQHSEKLAVAFGLINTKQGTPLRIVKNLRVCEDCHSAMKL 365 P K + +DIDEE+KE +SQHSEKLAVAFGLINT++G +RIVKNLR+CEDCHS MK+ Sbjct: 465 KPATKLVTFDIDEEDKEVCISQHSEKLAVAFGLINTRRGAVIRIVKNLRICEDCHSVMKV 524 Query: 366 ISKVFNWLIVIRDRSRFHHF 425 +S+V++ +IV+RDR+RFHHF Sbjct: 525 VSEVYDRVIVVRDRNRFHHF 544 >ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Brachypodium distachyon] Length = 571 Score = 186 bits (473), Expect = 1e-45 Identities = 86/140 (61%), Positives = 117/140 (83%) Frame = +3 Query: 6 VDEVRNSMKELGIKKSPGSSLIELDGDVHEFVAGDRSHHQTNKINMMLDEIARLLSLEGH 185 V EVR+SMKE I K PGSS++ELDG V+EF++GD SH Q+++I MLDE+ + LSL+GH Sbjct: 421 VQEVRSSMKEHRIYKPPGSSIVELDGVVYEFLSGDHSHPQSDRIYAMLDEVCKTLSLKGH 480 Query: 186 VPTVKGIPYDIDEEEKEQALSQHSEKLAVAFGLINTKQGTPLRIVKNLRVCEDCHSAMKL 365 P+ K + +DIDEE+KE +SQHSEKLA+A GLI+T++G +RIVKNLR+CEDCHS MK+ Sbjct: 481 RPSTKEVAFDIDEEDKEVCISQHSEKLALALGLISTRRGAVIRIVKNLRICEDCHSVMKI 540 Query: 366 ISKVFNWLIVIRDRSRFHHF 425 +S+V++ +IV+RDR+RFHHF Sbjct: 541 VSEVYDRVIVVRDRNRFHHF 560 >ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Vitis vinifera] Length = 613 Score = 178 bits (452), Expect = 4e-43 Identities = 88/141 (62%), Positives = 109/141 (77%) Frame = +3 Query: 3 EVDEVRNSMKELGIKKSPGSSLIELDGDVHEFVAGDRSHHQTNKINMMLDEIARLLSLEG 182 +V +VR +M G+KK+PG SL+EL +HEFV GDRSH QT +I + L EI +LL LEG Sbjct: 462 DVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEG 521 Query: 183 HVPTVKGIPYDIDEEEKEQALSQHSEKLAVAFGLINTKQGTPLRIVKNLRVCEDCHSAMK 362 +VP + + DI+EEEKE ALS HSEK+A+AF LINT G P+R+VKNLRVC DCH A+K Sbjct: 522 YVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIK 581 Query: 363 LISKVFNWLIVIRDRSRFHHF 425 LISKVF+ IV+RDRSRFHHF Sbjct: 582 LISKVFDREIVVRDRSRFHHF 602 >emb|CAN67095.1| hypothetical protein VITISV_016806 [Vitis vinifera] Length = 348 Score = 178 bits (452), Expect = 4e-43 Identities = 88/141 (62%), Positives = 109/141 (77%) Frame = +3 Query: 3 EVDEVRNSMKELGIKKSPGSSLIELDGDVHEFVAGDRSHHQTNKINMMLDEIARLLSLEG 182 +V +VR +M G+KK+PG SL+EL +HEFV GDRSH QT +I + L EI +LL LEG Sbjct: 197 DVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEG 256 Query: 183 HVPTVKGIPYDIDEEEKEQALSQHSEKLAVAFGLINTKQGTPLRIVKNLRVCEDCHSAMK 362 +VP + + DI+EEEKE ALS HSEK+A+AF LINT G P+R+VKNLRVC DCH A+K Sbjct: 257 YVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIK 316 Query: 363 LISKVFNWLIVIRDRSRFHHF 425 LISKVF+ IV+RDRSRFHHF Sbjct: 317 LISKVFDREIVVRDRSRFHHF 337