BLASTX nr result

ID: Coptis21_contig00026398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026398
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283424.2| PREDICTED: uncharacterized protein LOC100246...    75   7e-12
emb|CBI16489.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_002304012.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
emb|CCH50956.1| T1.4 [Malus x robusta]                                 70   2e-10
ref|XP_003537513.1| PREDICTED: uncharacterized protein LOC100777...    68   7e-10

>ref|XP_002283424.2| PREDICTED: uncharacterized protein LOC100246694 [Vitis vinifera]
          Length = 866

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/61 (62%), Positives = 45/61 (73%), Gaps = 6/61 (9%)
 Frame = +2

Query: 71  FGVKSGFLIPKNKLSGSLVP----GKV--ETDAVKEETTKKIQRKTKWGTDLTEDDTVRK 232
           FG KSGF+IPKNKLSGS+VP    GK    +D   EE+TK +QRKTKWG DLT+D  VR+
Sbjct: 36  FGAKSGFVIPKNKLSGSMVPIFRAGKKLGSSDGANEESTKTVQRKTKWGPDLTQDAAVRR 95

Query: 233 G 235
           G
Sbjct: 96  G 96


>emb|CBI16489.3| unnamed protein product [Vitis vinifera]
          Length = 886

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/61 (62%), Positives = 45/61 (73%), Gaps = 6/61 (9%)
 Frame = +2

Query: 71  FGVKSGFLIPKNKLSGSLVP----GKV--ETDAVKEETTKKIQRKTKWGTDLTEDDTVRK 232
           FG KSGF+IPKNKLSGS+VP    GK    +D   EE+TK +QRKTKWG DLT+D  VR+
Sbjct: 36  FGAKSGFVIPKNKLSGSMVPIFRAGKKLGSSDGANEESTKTVQRKTKWGPDLTQDAAVRR 95

Query: 233 G 235
           G
Sbjct: 96  G 96


>ref|XP_002304012.1| predicted protein [Populus trichocarpa] gi|222841444|gb|EEE78991.1|
           predicted protein [Populus trichocarpa]
          Length = 771

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/61 (62%), Positives = 44/61 (72%), Gaps = 6/61 (9%)
 Frame = +2

Query: 71  FGVKSGFLIPKNKLSGSLVP----GKV--ETDAVKEETTKKIQRKTKWGTDLTEDDTVRK 232
           F  KSGF+IPKNKLSGSLVP    GK     DAV  E+T ++QRKTKWG DLT+D  VR+
Sbjct: 21  FAAKSGFVIPKNKLSGSLVPIFKGGKKPGSNDAVNGESTNQVQRKTKWGPDLTQDADVRR 80

Query: 233 G 235
           G
Sbjct: 81  G 81


>emb|CCH50956.1| T1.4 [Malus x robusta]
          Length = 648

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 8/63 (12%)
 Frame = +2

Query: 71  FGVKSGFLIPKNKLSGSLVP--------GKVETDAVKEETTKKIQRKTKWGTDLTEDDTV 226
           F  K+GF+IPKNKLSGSLVP        G V  DAV  E+ K+IQRKTKWG DLT+D +V
Sbjct: 15  FAAKAGFVIPKNKLSGSLVPVFRGSKNLGAV--DAVSGESKKRIQRKTKWGPDLTQDASV 72

Query: 227 RKG 235
           +KG
Sbjct: 73  KKG 75


>ref|XP_003537513.1| PREDICTED: uncharacterized protein LOC100777227 [Glycine max]
          Length = 787

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 7/62 (11%)
 Frame = +2

Query: 71  FGVKSGFLIPKNKLSGSLVP-------GKVETDAVKEETTKKIQRKTKWGTDLTEDDTVR 229
           F  KSGF+IPKNKLSGSLVP         V   A+ EE++K+I+R++KWG DLT+D  VR
Sbjct: 29  FSAKSGFVIPKNKLSGSLVPIFRGAKQHGVTAAAINEESSKQIERRSKWGPDLTQDAAVR 88

Query: 230 KG 235
           +G
Sbjct: 89  RG 90


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