BLASTX nr result
ID: Coptis21_contig00026398
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00026398 (237 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283424.2| PREDICTED: uncharacterized protein LOC100246... 75 7e-12 emb|CBI16489.3| unnamed protein product [Vitis vinifera] 75 7e-12 ref|XP_002304012.1| predicted protein [Populus trichocarpa] gi|2... 72 6e-11 emb|CCH50956.1| T1.4 [Malus x robusta] 70 2e-10 ref|XP_003537513.1| PREDICTED: uncharacterized protein LOC100777... 68 7e-10 >ref|XP_002283424.2| PREDICTED: uncharacterized protein LOC100246694 [Vitis vinifera] Length = 866 Score = 74.7 bits (182), Expect = 7e-12 Identities = 38/61 (62%), Positives = 45/61 (73%), Gaps = 6/61 (9%) Frame = +2 Query: 71 FGVKSGFLIPKNKLSGSLVP----GKV--ETDAVKEETTKKIQRKTKWGTDLTEDDTVRK 232 FG KSGF+IPKNKLSGS+VP GK +D EE+TK +QRKTKWG DLT+D VR+ Sbjct: 36 FGAKSGFVIPKNKLSGSMVPIFRAGKKLGSSDGANEESTKTVQRKTKWGPDLTQDAAVRR 95 Query: 233 G 235 G Sbjct: 96 G 96 >emb|CBI16489.3| unnamed protein product [Vitis vinifera] Length = 886 Score = 74.7 bits (182), Expect = 7e-12 Identities = 38/61 (62%), Positives = 45/61 (73%), Gaps = 6/61 (9%) Frame = +2 Query: 71 FGVKSGFLIPKNKLSGSLVP----GKV--ETDAVKEETTKKIQRKTKWGTDLTEDDTVRK 232 FG KSGF+IPKNKLSGS+VP GK +D EE+TK +QRKTKWG DLT+D VR+ Sbjct: 36 FGAKSGFVIPKNKLSGSMVPIFRAGKKLGSSDGANEESTKTVQRKTKWGPDLTQDAAVRR 95 Query: 233 G 235 G Sbjct: 96 G 96 >ref|XP_002304012.1| predicted protein [Populus trichocarpa] gi|222841444|gb|EEE78991.1| predicted protein [Populus trichocarpa] Length = 771 Score = 71.6 bits (174), Expect = 6e-11 Identities = 38/61 (62%), Positives = 44/61 (72%), Gaps = 6/61 (9%) Frame = +2 Query: 71 FGVKSGFLIPKNKLSGSLVP----GKV--ETDAVKEETTKKIQRKTKWGTDLTEDDTVRK 232 F KSGF+IPKNKLSGSLVP GK DAV E+T ++QRKTKWG DLT+D VR+ Sbjct: 21 FAAKSGFVIPKNKLSGSLVPIFKGGKKPGSNDAVNGESTNQVQRKTKWGPDLTQDADVRR 80 Query: 233 G 235 G Sbjct: 81 G 81 >emb|CCH50956.1| T1.4 [Malus x robusta] Length = 648 Score = 70.1 bits (170), Expect = 2e-10 Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 8/63 (12%) Frame = +2 Query: 71 FGVKSGFLIPKNKLSGSLVP--------GKVETDAVKEETTKKIQRKTKWGTDLTEDDTV 226 F K+GF+IPKNKLSGSLVP G V DAV E+ K+IQRKTKWG DLT+D +V Sbjct: 15 FAAKAGFVIPKNKLSGSLVPVFRGSKNLGAV--DAVSGESKKRIQRKTKWGPDLTQDASV 72 Query: 227 RKG 235 +KG Sbjct: 73 KKG 75 >ref|XP_003537513.1| PREDICTED: uncharacterized protein LOC100777227 [Glycine max] Length = 787 Score = 68.2 bits (165), Expect = 7e-10 Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 7/62 (11%) Frame = +2 Query: 71 FGVKSGFLIPKNKLSGSLVP-------GKVETDAVKEETTKKIQRKTKWGTDLTEDDTVR 229 F KSGF+IPKNKLSGSLVP V A+ EE++K+I+R++KWG DLT+D VR Sbjct: 29 FSAKSGFVIPKNKLSGSLVPIFRGAKQHGVTAAAINEESSKQIERRSKWGPDLTQDAAVR 88 Query: 230 KG 235 +G Sbjct: 89 RG 90