BLASTX nr result

ID: Coptis21_contig00026396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026396
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536484.1| PREDICTED: valyl-tRNA synthetase-like isofor...   149   3e-34
ref|XP_002275092.2| PREDICTED: valyl-tRNA synthetase-like [Vitis...   148   5e-34
emb|CBI31848.3| unnamed protein product [Vitis vinifera]              148   5e-34
gb|AEX97083.1| valyl-tRNA synthetase, partial [Malus x domestica]     147   7e-34
ref|NP_172913.1| Valyl-tRNA synthetase [Arabidopsis thaliana] gi...   147   9e-34

>ref|XP_003536484.1| PREDICTED: valyl-tRNA synthetase-like isoform 1 [Glycine max]
           gi|356535910|ref|XP_003536485.1| PREDICTED: valyl-tRNA
           synthetase-like isoform 2 [Glycine max]
          Length = 1050

 Score =  149 bits (375), Expect = 3e-34
 Identities = 69/90 (76%), Positives = 79/90 (87%)
 Frame = -3

Query: 272 RFKARSAVIEALKKKGLHRGVKNNEMSLAVCSRSNDVVEPMIKPQWFVDCALMAKEALDA 93
           RFKAR AV EAL+KK L+RG +NNEM L VCSRSNDVVEPMIKPQW+V+C  +AK+AL A
Sbjct: 428 RFKAREAVAEALQKKDLYRGSENNEMRLGVCSRSNDVVEPMIKPQWYVNCNDLAKQALHA 487

Query: 92  VVDDENKKIEIIPKKYAADWKRWLENIRDW 3
            VD+ENK+IEIIPK+Y ADWKRWLENIRDW
Sbjct: 488 AVDEENKRIEIIPKQYLADWKRWLENIRDW 517


>ref|XP_002275092.2| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera]
          Length = 1071

 Score =  148 bits (373), Expect = 5e-34
 Identities = 66/90 (73%), Positives = 80/90 (88%)
 Frame = -3

Query: 272 RFKARSAVIEALKKKGLHRGVKNNEMSLAVCSRSNDVVEPMIKPQWFVDCALMAKEALDA 93
           RFKAR AV+ AL +KGL++G K+NEM L +CSR+ DVVEP+IKPQW+V C+ +A EALDA
Sbjct: 429 RFKAREAVVAALHEKGLYKGAKDNEMRLGLCSRTKDVVEPLIKPQWYVSCSGIANEALDA 488

Query: 92  VVDDENKKIEIIPKKYAADWKRWLENIRDW 3
           V+DDEN+KIEIIPK+YAADWKRWLENIRDW
Sbjct: 489 VMDDENRKIEIIPKQYAADWKRWLENIRDW 518


>emb|CBI31848.3| unnamed protein product [Vitis vinifera]
          Length = 1106

 Score =  148 bits (373), Expect = 5e-34
 Identities = 66/90 (73%), Positives = 80/90 (88%)
 Frame = -3

Query: 272 RFKARSAVIEALKKKGLHRGVKNNEMSLAVCSRSNDVVEPMIKPQWFVDCALMAKEALDA 93
           RFKAR AV+ AL +KGL++G K+NEM L +CSR+ DVVEP+IKPQW+V C+ +A EALDA
Sbjct: 464 RFKAREAVVAALHEKGLYKGAKDNEMRLGLCSRTKDVVEPLIKPQWYVSCSGIANEALDA 523

Query: 92  VVDDENKKIEIIPKKYAADWKRWLENIRDW 3
           V+DDEN+KIEIIPK+YAADWKRWLENIRDW
Sbjct: 524 VMDDENRKIEIIPKQYAADWKRWLENIRDW 553


>gb|AEX97083.1| valyl-tRNA synthetase, partial [Malus x domestica]
          Length = 142

 Score =  147 bits (372), Expect = 7e-34
 Identities = 68/90 (75%), Positives = 75/90 (83%)
 Frame = -3

Query: 272 RFKARSAVIEALKKKGLHRGVKNNEMSLAVCSRSNDVVEPMIKPQWFVDCALMAKEALDA 93
           RFKAR AV EALKKKGL R  K NEM L +CSRS DVVEPMIKPQW+V C+ M KEAL A
Sbjct: 49  RFKAREAVTEALKKKGLFRDAKANEMRLGICSRSQDVVEPMIKPQWYVKCSGMGKEALHA 108

Query: 92  VVDDENKKIEIIPKKYAADWKRWLENIRDW 3
            +DDEN+K+EIIPK+Y ADWKRWLENIRDW
Sbjct: 109 AIDDENRKLEIIPKQYTADWKRWLENIRDW 138


>ref|NP_172913.1| Valyl-tRNA synthetase [Arabidopsis thaliana]
           gi|21542452|sp|P93736.2|SYV_ARATH RecName:
           Full=Valine--tRNA ligase; AltName: Full=Valyl-tRNA
           synthetase; Short=ValRS gi|332191069|gb|AEE29190.1|
           Valyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 1108

 Score =  147 bits (371), Expect = 9e-34
 Identities = 61/90 (67%), Positives = 79/90 (87%)
 Frame = -3

Query: 272 RFKARSAVIEALKKKGLHRGVKNNEMSLAVCSRSNDVVEPMIKPQWFVDCALMAKEALDA 93
           RF AR AV+EAL+K+GL+RG KNNEM L +CSR+NDV+EPMIKPQW+V+C+++ KEALD 
Sbjct: 466 RFAAREAVVEALQKQGLYRGAKNNEMRLGLCSRTNDVIEPMIKPQWYVNCSMIGKEALDV 525

Query: 92  VVDDENKKIEIIPKKYAADWKRWLENIRDW 3
            + DENKK+E +PK+Y A+W+RWLENIRDW
Sbjct: 526 AITDENKKLEFVPKQYTAEWRRWLENIRDW 555


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