BLASTX nr result

ID: Coptis21_contig00026377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026377
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136026.1| PREDICTED: outer envelope pore protein 16-4,...   144   1e-32
ref|XP_002523089.1| protein translocase, putative [Ricinus commu...   144   2e-32
ref|XP_002320341.1| predicted protein [Populus trichocarpa] gi|2...   139   6e-31
ref|XP_002878484.1| atoep16-4 [Arabidopsis lyrata subsp. lyrata]...   135   1e-29
ref|NP_191847.1| translocase Oep16 [Arabidopsis thaliana] gi|793...   134   2e-29

>ref|XP_004136026.1| PREDICTED: outer envelope pore protein 16-4, chloroplastic-like
           [Cucumis sativus] gi|449498503|ref|XP_004160555.1|
           PREDICTED: outer envelope pore protein 16-4,
           chloroplastic-like [Cucumis sativus]
          Length = 130

 Score =  144 bits (364), Expect = 1e-32
 Identities = 64/119 (53%), Positives = 89/119 (74%)
 Frame = +2

Query: 11  VPCISIAADSTLRIAAAGTIWGLTSGPYNARKLGLTGLSKASYVVKSAGSSGLQCGIFAG 190
           VPC S+A +S++R+  AG +WGL  GPYN+RK GLTG++ A++V +S G  G QCG+ AG
Sbjct: 9   VPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLTGVAHAAFVARSVGKYGFQCGLVAG 68

Query: 191 IYSTTHCGIQKYRGKKDMLNASISGAVTGAVFAARSRSWIKVFGMAALVASITTAAEFS 367
            ++ THCGIQ+YR + D LN  I+GAV GA  A ++RSW +V GMAALV++ + AAE+S
Sbjct: 69  TFTLTHCGIQRYRKRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAFSAAAEYS 127


>ref|XP_002523089.1| protein translocase, putative [Ricinus communis]
           gi|223537651|gb|EEF39274.1| protein translocase,
           putative [Ricinus communis]
          Length = 130

 Score =  144 bits (363), Expect = 2e-32
 Identities = 66/120 (55%), Positives = 88/120 (73%)
 Frame = +2

Query: 8   EVPCISIAADSTLRIAAAGTIWGLTSGPYNARKLGLTGLSKASYVVKSAGSSGLQCGIFA 187
           ++PC S A DS LR+  AG IWGL  GP+NARK GLTG S+AS+V KS G    QCG+ A
Sbjct: 8   DIPCSSYAVDSILRVGTAGAIWGLCIGPHNARKRGLTGASQASFVAKSVGKFSFQCGLVA 67

Query: 188 GIYSTTHCGIQKYRGKKDMLNASISGAVTGAVFAARSRSWIKVFGMAALVASITTAAEFS 367
           G+++ THCGI++YR K D +NA I+GAV GA  AA +R+W +V GMA LV++ + AA++S
Sbjct: 68  GVFTFTHCGIRRYRRKNDWVNALIAGAVAGAAVAAGTRNWTQVVGMAGLVSAFSVAADYS 127


>ref|XP_002320341.1| predicted protein [Populus trichocarpa] gi|222861114|gb|EEE98656.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  139 bits (350), Expect = 6e-31
 Identities = 64/119 (53%), Positives = 87/119 (73%)
 Frame = +2

Query: 11  VPCISIAADSTLRIAAAGTIWGLTSGPYNARKLGLTGLSKASYVVKSAGSSGLQCGIFAG 190
           VPC S+A DS LR+  AG IWG   GPY+ARK GLTG+++AS+V K+ G  G QCG+ AG
Sbjct: 9   VPCSSLAVDSVLRVGTAGAIWGSCIGPYDARKRGLTGVAQASFVAKTIGKFGFQCGLVAG 68

Query: 191 IYSTTHCGIQKYRGKKDMLNASISGAVTGAVFAARSRSWIKVFGMAALVASITTAAEFS 367
           +++ T CGIQ+YR + D +N  I+GAV GA  AA +RSW +V GMA LV++ + AA++S
Sbjct: 69  VFTATCCGIQRYRRQNDWVNPLIAGAVAGAAVAAGTRSWTQVVGMAGLVSAFSVAADYS 127


>ref|XP_002878484.1| atoep16-4 [Arabidopsis lyrata subsp. lyrata]
           gi|297324322|gb|EFH54743.1| atoep16-4 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 134

 Score =  135 bits (339), Expect = 1e-29
 Identities = 59/116 (50%), Positives = 86/116 (74%)
 Frame = +2

Query: 11  VPCISIAADSTLRIAAAGTIWGLTSGPYNARKLGLTGLSKASYVVKSAGSSGLQCGIFAG 190
           VPC S+  +S +R+A AG ++GL +GP +ARK+GL+G+S+ASYV KS G  G QCG+ +G
Sbjct: 9   VPCSSLTVESVIRVATAGGLYGLCAGPRDARKIGLSGVSQASYVAKSIGRFGFQCGLVSG 68

Query: 191 IYSTTHCGIQKYRGKKDMLNASISGAVTGAVFAARSRSWIKVFGMAALVASITTAA 358
           +++ THCG+Q+YRGK D +NA + GAV GA  A  +R+W +V GMA LV++ +  A
Sbjct: 69  VFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAFSVLA 124


>ref|NP_191847.1| translocase Oep16 [Arabidopsis thaliana]
           gi|79316160|ref|NP_001030919.1| translocase Oep16
           [Arabidopsis thaliana]
           gi|75181276|sp|Q9LZH8.1|OP164_ARATH RecName: Full=Outer
           envelope pore protein 16-4, chloroplastic; AltName:
           Full=Chloroplastic outer envelope pore protein of 16 kDa
           4; Short=AtOEP16-4; Short=OEP16-4
           gi|7362768|emb|CAB83138.1| putative protein [Arabidopsis
           thaliana] gi|26450248|dbj|BAC42241.1| unknown protein
           [Arabidopsis thaliana] gi|28827678|gb|AAO50683.1|
           unknown protein [Arabidopsis thaliana]
           gi|332646884|gb|AEE80405.1| translocase Oep16
           [Arabidopsis thaliana] gi|332646885|gb|AEE80406.1|
           translocase Oep16 [Arabidopsis thaliana]
          Length = 136

 Score =  134 bits (337), Expect = 2e-29
 Identities = 59/116 (50%), Positives = 86/116 (74%)
 Frame = +2

Query: 11  VPCISIAADSTLRIAAAGTIWGLTSGPYNARKLGLTGLSKASYVVKSAGSSGLQCGIFAG 190
           VPC S+  +S LR+A AG ++GL +GP +ARK+GL+G+S+AS+V KS G  G QCG+ +G
Sbjct: 9   VPCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSGVSQASFVAKSIGRFGFQCGLVSG 68

Query: 191 IYSTTHCGIQKYRGKKDMLNASISGAVTGAVFAARSRSWIKVFGMAALVASITTAA 358
           +++ THCG+Q+YRGK D +NA + GAV GA  A  +R+W +V GMA LV++ +  A
Sbjct: 69  VFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAFSVLA 124


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