BLASTX nr result

ID: Coptis21_contig00026376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026376
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326306.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-50
gb|AAF82233.1|AC069143_9 Contains a strong similarity to a respi...   201   7e-50
sp|O81211.2|RBOHE_ARATH RecName: Full=Respiratory burst oxidase ...   201   7e-50
ref|NP_001185032.1| riboflavin synthase-like protein [Arabidopsi...   201   7e-50
ref|XP_002890325.1| hypothetical protein ARALYDRAFT_312861 [Arab...   199   3e-49

>ref|XP_002326306.1| predicted protein [Populus trichocarpa] gi|222833499|gb|EEE71976.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score =  202 bits (514), Expect = 2e-50
 Identities = 92/119 (77%), Positives = 104/119 (87%)
 Frame = +1

Query: 1   RGLILENWQRAWIIVVWALIMATLFTWKFNQYRKKAAFHVMGYCLTTAKGAAETLKFNMA 180
           R LILE WQRAWI+ +W +IM  LF WKF QY+ KAAFHVMGYCL +AKGAAETLKFNMA
Sbjct: 156 RNLILEKWQRAWILSLWVMIMVGLFVWKFLQYKNKAAFHVMGYCLASAKGAAETLKFNMA 215

Query: 181 LILLPVCRNTLTWLRSTKARLFVPFDDNINFHKVIASAIGLGILLHAVNHLACDFPRLI 357
           LILLPVCRNTLTWLRST+AR FVPFD+NINFHK++A AI +G++LHA NHL CDFPRLI
Sbjct: 216 LILLPVCRNTLTWLRSTRARSFVPFDENINFHKMVAGAIVIGVILHAGNHLLCDFPRLI 274


>gb|AAF82233.1|AC069143_9 Contains a strong similarity to a respiratory burst oxidase protein
           E (RbohE) from Arabidopsis thaliana gb|AF055356 and
           contains an EF hand PF|00036 and ferric reductase
           transmembrane component PF|01794 domains [Arabidopsis
           thaliana]
          Length = 932

 Score =  201 bits (510), Expect = 7e-50
 Identities = 90/117 (76%), Positives = 105/117 (89%)
 Frame = +1

Query: 7   LILENWQRAWIIVVWALIMATLFTWKFNQYRKKAAFHVMGYCLTTAKGAAETLKFNMALI 186
           LIL+NWQR+W+++VW ++MA LF WKF +YR+KAAF VMGYCLTTAKGAAETLK NMAL+
Sbjct: 385 LILDNWQRSWVLLVWVMLMAILFVWKFLEYREKAAFKVMGYCLTTAKGAAETLKLNMALV 444

Query: 187 LLPVCRNTLTWLRSTKARLFVPFDDNINFHKVIASAIGLGILLHAVNHLACDFPRLI 357
           LLPVCRNTLTWLRST+AR  VPFDDNINFHK+IA AI +GIL+HA  HLACDFPR+I
Sbjct: 445 LLPVCRNTLTWLRSTRARACVPFDDNINFHKIIACAIAIGILVHAGTHLACDFPRII 501


>sp|O81211.2|RBOHE_ARATH RecName: Full=Respiratory burst oxidase homolog protein E; AltName:
           Full=NADPH oxidase RBOHE; Short=AtRBOHE
          Length = 952

 Score =  201 bits (510), Expect = 7e-50
 Identities = 90/117 (76%), Positives = 105/117 (89%)
 Frame = +1

Query: 7   LILENWQRAWIIVVWALIMATLFTWKFNQYRKKAAFHVMGYCLTTAKGAAETLKFNMALI 186
           LIL+NWQR+W+++VW ++MA LF WKF +YR+KAAF VMGYCLTTAKGAAETLK NMAL+
Sbjct: 385 LILDNWQRSWVLLVWVMLMAILFVWKFLEYREKAAFKVMGYCLTTAKGAAETLKLNMALV 444

Query: 187 LLPVCRNTLTWLRSTKARLFVPFDDNINFHKVIASAIGLGILLHAVNHLACDFPRLI 357
           LLPVCRNTLTWLRST+AR  VPFDDNINFHK+IA AI +GIL+HA  HLACDFPR+I
Sbjct: 445 LLPVCRNTLTWLRSTRARACVPFDDNINFHKIIACAIAIGILVHAGTHLACDFPRII 501


>ref|NP_001185032.1| riboflavin synthase-like protein [Arabidopsis thaliana]
           gi|332191700|gb|AEE29821.1| riboflavin synthase-like
           protein [Arabidopsis thaliana]
          Length = 934

 Score =  201 bits (510), Expect = 7e-50
 Identities = 90/117 (76%), Positives = 105/117 (89%)
 Frame = +1

Query: 7   LILENWQRAWIIVVWALIMATLFTWKFNQYRKKAAFHVMGYCLTTAKGAAETLKFNMALI 186
           LIL+NWQR+W+++VW ++MA LF WKF +YR+KAAF VMGYCLTTAKGAAETLK NMAL+
Sbjct: 367 LILDNWQRSWVLLVWVMLMAILFVWKFLEYREKAAFKVMGYCLTTAKGAAETLKLNMALV 426

Query: 187 LLPVCRNTLTWLRSTKARLFVPFDDNINFHKVIASAIGLGILLHAVNHLACDFPRLI 357
           LLPVCRNTLTWLRST+AR  VPFDDNINFHK+IA AI +GIL+HA  HLACDFPR+I
Sbjct: 427 LLPVCRNTLTWLRSTRARACVPFDDNINFHKIIACAIAIGILVHAGTHLACDFPRII 483


>ref|XP_002890325.1| hypothetical protein ARALYDRAFT_312861 [Arabidopsis lyrata subsp.
           lyrata] gi|297336167|gb|EFH66584.1| hypothetical protein
           ARALYDRAFT_312861 [Arabidopsis lyrata subsp. lyrata]
          Length = 946

 Score =  199 bits (505), Expect = 3e-49
 Identities = 88/117 (75%), Positives = 105/117 (89%)
 Frame = +1

Query: 7   LILENWQRAWIIVVWALIMATLFTWKFNQYRKKAAFHVMGYCLTTAKGAAETLKFNMALI 186
           L+L+NWQR+W++++W ++MA LF WKF +YR+KAAF VMGYCLTTAKGAAETLK NMAL+
Sbjct: 384 LVLDNWQRSWVLLLWIMLMAILFVWKFLEYREKAAFKVMGYCLTTAKGAAETLKLNMALV 443

Query: 187 LLPVCRNTLTWLRSTKARLFVPFDDNINFHKVIASAIGLGILLHAVNHLACDFPRLI 357
           LLPVCRNTLTWLRST+AR  VPFDDNINFHK+IA AI +GIL+HA  HLACDFPR+I
Sbjct: 444 LLPVCRNTLTWLRSTRARACVPFDDNINFHKIIACAIAIGILVHAGTHLACDFPRII 500


Top