BLASTX nr result

ID: Coptis21_contig00026369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026369
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40036.1| chitinase [Tripsacum dactyloides]                       70   2e-10
ref|XP_002881917.1| hypothetical protein ARALYDRAFT_483470 [Arab...    69   3e-10
ref|NP_181887.1| chitinase-like protein [Arabidopsis thaliana] g...    69   4e-10
ref|XP_002534548.1| class IV chitinase, putative [Ricinus commun...    68   7e-10
emb|CAA87072.1| pathogenesis-related protein PR-3 type [Sambucus...    68   9e-10

>gb|AAT40036.1| chitinase [Tripsacum dactyloides]
          Length = 277

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 25/31 (80%), Positives = 26/31 (83%)
 Frame = +3

Query: 138 NCGCAPNFCCSQYGYCGTDPEYCGPGCREGP 230
           NCGC PNFCCS+YGYCGT  EYCG GCR GP
Sbjct: 29  NCGCQPNFCCSKYGYCGTSDEYCGDGCRSGP 59


>ref|XP_002881917.1| hypothetical protein ARALYDRAFT_483470 [Arabidopsis lyrata subsp.
           lyrata] gi|297327756|gb|EFH58176.1| hypothetical protein
           ARALYDRAFT_483470 [Arabidopsis lyrata subsp. lyrata]
          Length = 264

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 25/31 (80%), Positives = 26/31 (83%)
 Frame = +3

Query: 138 NCGCAPNFCCSQYGYCGTDPEYCGPGCREGP 230
           NCGCAPN CCSQ+GYCGTD  YCG GCR GP
Sbjct: 26  NCGCAPNLCCSQFGYCGTDDAYCGAGCRSGP 56


>ref|NP_181887.1| chitinase-like protein [Arabidopsis thaliana]
           gi|2281111|gb|AAB64047.1| putative endochitinase
           [Arabidopsis thaliana] gi|20196867|gb|AAM14810.1|
           putative endochitinase [Arabidopsis thaliana]
           gi|32815951|gb|AAP88360.1| At2g43590 [Arabidopsis
           thaliana] gi|110736333|dbj|BAF00136.1| putative
           endochitinase [Arabidopsis thaliana]
           gi|330255199|gb|AEC10293.1| chitinase-like protein
           [Arabidopsis thaliana]
          Length = 264

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 25/31 (80%), Positives = 26/31 (83%)
 Frame = +3

Query: 138 NCGCAPNFCCSQYGYCGTDPEYCGPGCREGP 230
           NCGCAPN CCSQ+GYCGTD  YCG GCR GP
Sbjct: 26  NCGCAPNLCCSQFGYCGTDDAYCGVGCRSGP 56


>ref|XP_002534548.1| class IV chitinase, putative [Ricinus communis]
           gi|223525062|gb|EEF27835.1| class IV chitinase, putative
           [Ricinus communis]
          Length = 271

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = +3

Query: 138 NCGCAPNFCCSQYGYCGTDPEYCGPGCREGP 230
           NCGC+P  CCSQYGYCG+  +YCGPGCR+GP
Sbjct: 29  NCGCSPGLCCSQYGYCGSGKDYCGPGCRQGP 59


>emb|CAA87072.1| pathogenesis-related protein PR-3 type [Sambucus nigra]
          Length = 261

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = +3

Query: 138 NCGCAPNFCCSQYGYCGTDPEYCGPGCREGP 230
           NCGCAPN CCSQ+GYCG+D  YCG GCR GP
Sbjct: 17  NCGCAPNLCCSQFGYCGSDAAYCGEGCRSGP 47


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