BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026348
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   171   7e-41
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              171   7e-41
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   155   2e-36
ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic su...   154   7e-36

>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
           vinifera]
          Length = 1522

 Score =  171 bits (432), Expect = 7e-41
 Identities = 80/132 (60%), Positives = 103/132 (78%), Gaps = 4/132 (3%)
 Frame = +2

Query: 2   SASAGWKALRNGDNGDVG----VIRKECNAEVKSEIFLDSDGSLPFYIIDAYEEFYGNNL 169
           +A+AGW+A+RNG N   G    V+    N E K++  LDSDGSLPFYI+DA+EEFYG N+
Sbjct: 297 AATAGWQAVRNGGNPSAGYEGEVVNPSLNCEEKADFLLDSDGSLPFYILDAHEEFYGANM 356

Query: 170 GTVYLFGKVKAGNTYHSCCVVVRNMQRCVYAIPKKSIFPDNDIMELERDAADSQISTTIL 349
           G +YLFGKVKAG+ YHSCCVVV+NM+RCVYAIP  S+F +++IM LE+D   S++S   L
Sbjct: 357 GNLYLFGKVKAGSAYHSCCVVVKNMERCVYAIPNDSVFGNDEIMRLEKDIEASRVSPAAL 416

Query: 350 RTKLQEMASGLK 385
           RTKLQ++ASGLK
Sbjct: 417 RTKLQDVASGLK 428


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  171 bits (432), Expect = 7e-41
 Identities = 80/132 (60%), Positives = 103/132 (78%), Gaps = 4/132 (3%)
 Frame = +2

Query: 2   SASAGWKALRNGDNGDVG----VIRKECNAEVKSEIFLDSDGSLPFYIIDAYEEFYGNNL 169
           +A+AGW+A+RNG N   G    V+    N E K++  LDSDGSLPFYI+DA+EEFYG N+
Sbjct: 298 AATAGWQAVRNGGNPSAGYEGEVVNPSLNCEEKADFLLDSDGSLPFYILDAHEEFYGANM 357

Query: 170 GTVYLFGKVKAGNTYHSCCVVVRNMQRCVYAIPKKSIFPDNDIMELERDAADSQISTTIL 349
           G +YLFGKVKAG+ YHSCCVVV+NM+RCVYAIP  S+F +++IM LE+D   S++S   L
Sbjct: 358 GNLYLFGKVKAGSAYHSCCVVVKNMERCVYAIPNDSVFGNDEIMRLEKDIEASRVSPAAL 417

Query: 350 RTKLQEMASGLK 385
           RTKLQ++ASGLK
Sbjct: 418 RTKLQDVASGLK 429


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
           gi|223537171|gb|EEF38804.1| DNA polymerase alpha
           catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  155 bits (393), Expect = 2e-36
 Identities = 77/132 (58%), Positives = 99/132 (75%), Gaps = 4/132 (3%)
 Frame = +2

Query: 2   SASAGWKALRNGDNGDVGVIRKECNAEV----KSEIFLDSDGSLPFYIIDAYEEFYGNNL 169
           SA A W+A+R+G NG V  + +E  + V    +SE  L++DGSLPFYIIDA+EE +G N+
Sbjct: 296 SAMADWQAVRSGGNGSVAGVTEEVKSGVVCDEQSEFELEADGSLPFYIIDAHEEIFGANM 355

Query: 170 GTVYLFGKVKAGNTYHSCCVVVRNMQRCVYAIPKKSIFPDNDIMELERDAADSQISTTIL 349
           GT+YLFGKVKAGNTYHSCC+VV+NMQRCVYAIP  SIF   D++ LE+D  +S+IS    
Sbjct: 356 GTLYLFGKVKAGNTYHSCCMVVKNMQRCVYAIPNGSIFHTEDMIRLEKDVEESRISPAEF 415

Query: 350 RTKLQEMASGLK 385
           R KLQ++A  LK
Sbjct: 416 RKKLQDVAYELK 427


>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
           predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  155 bits (392), Expect = 3e-36
 Identities = 77/136 (56%), Positives = 96/136 (70%), Gaps = 8/136 (5%)
 Frame = +2

Query: 2   SASAGWKALRNGDNGDVGV--------IRKECNAEVKSEIFLDSDGSLPFYIIDAYEEFY 157
           SA+AGWK + NG NG   V        ++   N E +SE  LD DGSLPFYI+DA+EE +
Sbjct: 78  SATAGWKEVMNGKNGGEAVGGAGVVEEVKSGANCEEQSEFELDGDGSLPFYILDAHEEIF 137

Query: 158 GNNLGTVYLFGKVKAGNTYHSCCVVVRNMQRCVYAIPKKSIFPDNDIMELERDAADSQIS 337
           G N GT+YLFGKVKAGNTYHSCCVVV+NM RCVYAIP  SIF  +++  LE++  +S+IS
Sbjct: 138 GANRGTIYLFGKVKAGNTYHSCCVVVKNMHRCVYAIPNSSIFRTDEMSMLEKEVEESRIS 197

Query: 338 TTILRTKLQEMASGLK 385
           +T    KLQ+MA  LK
Sbjct: 198 STDFHKKLQDMAYELK 213


>ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
           [Cucumis sativus]
          Length = 498

 Score =  154 bits (389), Expect = 7e-36
 Identities = 74/128 (57%), Positives = 99/128 (77%)
 Frame = +2

Query: 2   SASAGWKALRNGDNGDVGVIRKECNAEVKSEIFLDSDGSLPFYIIDAYEEFYGNNLGTVY 181
           SA+A W+A+R+  +G V    +   AE KSE   D+DGSLPFYI+DA+EE +G N+GTVY
Sbjct: 327 SATAEWQAVRSEGSGSVNSAAEM--AEEKSEFDTDTDGSLPFYIVDAHEELFGANMGTVY 384

Query: 182 LFGKVKAGNTYHSCCVVVRNMQRCVYAIPKKSIFPDNDIMELERDAADSQISTTILRTKL 361
           LFGKVKAG+T+HSCCVVV+NMQRC+YAIP  S    ++++EL++DA +SQ+S   LR KL
Sbjct: 385 LFGKVKAGDTFHSCCVVVKNMQRCIYAIPSASFLHSDEMLELQKDAEESQLSPADLRAKL 444

Query: 362 QEMASGLK 385
           QE+ +GLK
Sbjct: 445 QEVTAGLK 452