BLASTX nr result
ID: Coptis21_contig00026348
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00026348 (385 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su... 171 7e-41 emb|CBI21412.3| unnamed protein product [Vitis vinifera] 171 7e-41 ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta... 155 2e-36 ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2... 155 3e-36 ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic su... 154 7e-36 >ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis vinifera] Length = 1522 Score = 171 bits (432), Expect = 7e-41 Identities = 80/132 (60%), Positives = 103/132 (78%), Gaps = 4/132 (3%) Frame = +2 Query: 2 SASAGWKALRNGDNGDVG----VIRKECNAEVKSEIFLDSDGSLPFYIIDAYEEFYGNNL 169 +A+AGW+A+RNG N G V+ N E K++ LDSDGSLPFYI+DA+EEFYG N+ Sbjct: 297 AATAGWQAVRNGGNPSAGYEGEVVNPSLNCEEKADFLLDSDGSLPFYILDAHEEFYGANM 356 Query: 170 GTVYLFGKVKAGNTYHSCCVVVRNMQRCVYAIPKKSIFPDNDIMELERDAADSQISTTIL 349 G +YLFGKVKAG+ YHSCCVVV+NM+RCVYAIP S+F +++IM LE+D S++S L Sbjct: 357 GNLYLFGKVKAGSAYHSCCVVVKNMERCVYAIPNDSVFGNDEIMRLEKDIEASRVSPAAL 416 Query: 350 RTKLQEMASGLK 385 RTKLQ++ASGLK Sbjct: 417 RTKLQDVASGLK 428 >emb|CBI21412.3| unnamed protein product [Vitis vinifera] Length = 1561 Score = 171 bits (432), Expect = 7e-41 Identities = 80/132 (60%), Positives = 103/132 (78%), Gaps = 4/132 (3%) Frame = +2 Query: 2 SASAGWKALRNGDNGDVG----VIRKECNAEVKSEIFLDSDGSLPFYIIDAYEEFYGNNL 169 +A+AGW+A+RNG N G V+ N E K++ LDSDGSLPFYI+DA+EEFYG N+ Sbjct: 298 AATAGWQAVRNGGNPSAGYEGEVVNPSLNCEEKADFLLDSDGSLPFYILDAHEEFYGANM 357 Query: 170 GTVYLFGKVKAGNTYHSCCVVVRNMQRCVYAIPKKSIFPDNDIMELERDAADSQISTTIL 349 G +YLFGKVKAG+ YHSCCVVV+NM+RCVYAIP S+F +++IM LE+D S++S L Sbjct: 358 GNLYLFGKVKAGSAYHSCCVVVKNMERCVYAIPNDSVFGNDEIMRLEKDIEASRVSPAAL 417 Query: 350 RTKLQEMASGLK 385 RTKLQ++ASGLK Sbjct: 418 RTKLQDVASGLK 429 >ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis] gi|223537171|gb|EEF38804.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis] Length = 1526 Score = 155 bits (393), Expect = 2e-36 Identities = 77/132 (58%), Positives = 99/132 (75%), Gaps = 4/132 (3%) Frame = +2 Query: 2 SASAGWKALRNGDNGDVGVIRKECNAEV----KSEIFLDSDGSLPFYIIDAYEEFYGNNL 169 SA A W+A+R+G NG V + +E + V +SE L++DGSLPFYIIDA+EE +G N+ Sbjct: 296 SAMADWQAVRSGGNGSVAGVTEEVKSGVVCDEQSEFELEADGSLPFYIIDAHEEIFGANM 355 Query: 170 GTVYLFGKVKAGNTYHSCCVVVRNMQRCVYAIPKKSIFPDNDIMELERDAADSQISTTIL 349 GT+YLFGKVKAGNTYHSCC+VV+NMQRCVYAIP SIF D++ LE+D +S+IS Sbjct: 356 GTLYLFGKVKAGNTYHSCCMVVKNMQRCVYAIPNGSIFHTEDMIRLEKDVEESRISPAEF 415 Query: 350 RTKLQEMASGLK 385 R KLQ++A LK Sbjct: 416 RKKLQDVAYELK 427 >ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1| predicted protein [Populus trichocarpa] Length = 1312 Score = 155 bits (392), Expect = 3e-36 Identities = 77/136 (56%), Positives = 96/136 (70%), Gaps = 8/136 (5%) Frame = +2 Query: 2 SASAGWKALRNGDNGDVGV--------IRKECNAEVKSEIFLDSDGSLPFYIIDAYEEFY 157 SA+AGWK + NG NG V ++ N E +SE LD DGSLPFYI+DA+EE + Sbjct: 78 SATAGWKEVMNGKNGGEAVGGAGVVEEVKSGANCEEQSEFELDGDGSLPFYILDAHEEIF 137 Query: 158 GNNLGTVYLFGKVKAGNTYHSCCVVVRNMQRCVYAIPKKSIFPDNDIMELERDAADSQIS 337 G N GT+YLFGKVKAGNTYHSCCVVV+NM RCVYAIP SIF +++ LE++ +S+IS Sbjct: 138 GANRGTIYLFGKVKAGNTYHSCCVVVKNMHRCVYAIPNSSIFRTDEMSMLEKEVEESRIS 197 Query: 338 TTILRTKLQEMASGLK 385 +T KLQ+MA LK Sbjct: 198 STDFHKKLQDMAYELK 213 >ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial [Cucumis sativus] Length = 498 Score = 154 bits (389), Expect = 7e-36 Identities = 74/128 (57%), Positives = 99/128 (77%) Frame = +2 Query: 2 SASAGWKALRNGDNGDVGVIRKECNAEVKSEIFLDSDGSLPFYIIDAYEEFYGNNLGTVY 181 SA+A W+A+R+ +G V + AE KSE D+DGSLPFYI+DA+EE +G N+GTVY Sbjct: 327 SATAEWQAVRSEGSGSVNSAAEM--AEEKSEFDTDTDGSLPFYIVDAHEELFGANMGTVY 384 Query: 182 LFGKVKAGNTYHSCCVVVRNMQRCVYAIPKKSIFPDNDIMELERDAADSQISTTILRTKL 361 LFGKVKAG+T+HSCCVVV+NMQRC+YAIP S ++++EL++DA +SQ+S LR KL Sbjct: 385 LFGKVKAGDTFHSCCVVVKNMQRCIYAIPSASFLHSDEMLELQKDAEESQLSPADLRAKL 444 Query: 362 QEMASGLK 385 QE+ +GLK Sbjct: 445 QEVTAGLK 452