BLASTX nr result

ID: Coptis21_contig00026345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026345
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281528.2| PREDICTED: myb-related protein 3R-1-like [Vi...    59   7e-09
emb|CBI20887.3| unnamed protein product [Vitis vinifera]               59   2e-06

>ref|XP_002281528.2| PREDICTED: myb-related protein 3R-1-like [Vitis vinifera]
          Length = 1051

 Score = 58.5 bits (140), Expect(2) = 7e-09
 Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
 Frame = +1

Query: 511 HRVGTDGNQEPKSVPFQSSVGFNAP--MGNSTMQPQNQELLCITEGDCRAVILSEGGTNV 684
           H  G + N++  S+P Q+SVG NA   MGN  +     E L I+EGDC      E GT+ 
Sbjct: 360 HFNGGNENRDTVSIPLQTSVGLNASSSMGNMGVDSDIPEHLLISEGDCCGFRFQEAGTDE 419

Query: 685 CFSLGNMTQSDLNSME-QCTDSSIYQSI-FQSCETTG 789
            FS  N+T+   N++E +CTD  + QS  FQ  ET+G
Sbjct: 420 YFSSENLTRC-TNAIELECTDPLVCQSSDFQISETSG 455



 Score = 27.7 bits (60), Expect(2) = 7e-09
 Identities = 23/92 (25%), Positives = 39/92 (42%)
 Frame = +2

Query: 212 VHAREEYDRSEEDIQRKGXXXXXXXXXXXXXXALDDVTRVVPEAQCGTANSFHSCENHPS 391
           +H REE+  +EE  Q K               ++++VT  +PE  C      +  E +  
Sbjct: 265 LHTREEFQMTEESGQGKEQSSSPISCSKQYYASIEEVTLSIPEIPCELDCPSNYLEPNFP 324

Query: 392 CEAGSSGNDGSSLCRSHDLPDSSAIELVHETS 487
            +A  SG+       S++ P  S+ EL   +S
Sbjct: 325 HDARISGSVERQF-NSNEQPAISSFELGQASS 355


>emb|CBI20887.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
 Frame = +1

Query: 511 HRVGTDGNQEPKSVPFQSSVGFNAP--MGNSTMQPQNQELLCITEGDCRAVILSEGGTNV 684
           H  G + N++  S+P Q+SVG NA   MGN  +     E L I+EGDC      E GT+ 
Sbjct: 233 HFNGGNENRDTVSIPLQTSVGLNASSSMGNMGVDSDIPEHLLISEGDCCGFRFQEAGTDE 292

Query: 685 CFSLGNMTQSDLNSME-QCTDSSIYQSI-FQSCETTG 789
            FS  N+T+   N++E +CTD  + QS  FQ  ET+G
Sbjct: 293 YFSSENLTRC-TNAIELECTDPLVCQSSDFQISETSG 328


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