BLASTX nr result

ID: Coptis21_contig00026333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026333
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc...   269   2e-70
ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc...   269   2e-70
ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ric...   268   3e-70
ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Viti...   265   2e-69
ref|XP_002274192.2| PREDICTED: protein SPA1-RELATED 3 [Vitis vin...   265   2e-69

>ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
          Length = 892

 Score =  269 bits (687), Expect = 2e-70
 Identities = 131/163 (80%), Positives = 142/163 (87%)
 Frame = +2

Query: 2    RSRKSEWINPFLEGLCKYLSFSKLEVKADLKQGDXXXXXXXXXXXXFDRDKEFFATAGVN 181
            R   S WINPFLEGLCKYLSFSKL+VKADLKQGD            FDRD EFFATAGVN
Sbjct: 544  REGASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVN 603

Query: 182  KKIKVFECDMILSENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSDFEGVVQVWDVTR 361
            KKIKVFECD I++E+RDIHYPVVEMASRSKLSSICWN+YIKSQIASS+FEGVVQ+WDVTR
Sbjct: 604  KKIKVFECDSIINEDRDIHYPVVEMASRSKLSSICWNTYIKSQIASSNFEGVVQLWDVTR 663

Query: 362  SQVFTEMREHERRVWSVDFSLADPTYLASGSDDGAVKLWNINQ 490
            SQV +EMREHERRVWS+DFS ADPT LASGSDDG+VKLW+INQ
Sbjct: 664  SQVISEMREHERRVWSIDFSSADPTMLASGSDDGSVKLWSINQ 706


>ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
          Length = 892

 Score =  269 bits (687), Expect = 2e-70
 Identities = 131/163 (80%), Positives = 142/163 (87%)
 Frame = +2

Query: 2    RSRKSEWINPFLEGLCKYLSFSKLEVKADLKQGDXXXXXXXXXXXXFDRDKEFFATAGVN 181
            R   S WINPFLEGLCKYLSFSKL+VKADLKQGD            FDRD EFFATAGVN
Sbjct: 543  REGASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVN 602

Query: 182  KKIKVFECDMILSENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSDFEGVVQVWDVTR 361
            KKIKVFECD I++E+RDIHYPVVEMASRSKLSSICWN+YIKSQIASS+FEGVVQ+WDVTR
Sbjct: 603  KKIKVFECDSIINEDRDIHYPVVEMASRSKLSSICWNTYIKSQIASSNFEGVVQLWDVTR 662

Query: 362  SQVFTEMREHERRVWSVDFSLADPTYLASGSDDGAVKLWNINQ 490
            SQV +EMREHERRVWS+DFS ADPT LASGSDDG+VKLW+INQ
Sbjct: 663  SQVISEMREHERRVWSIDFSSADPTMLASGSDDGSVKLWSINQ 705


>ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
            gi|223526576|gb|EEF28831.1| ubiquitin ligase protein
            cop1, putative [Ricinus communis]
          Length = 889

 Score =  268 bits (685), Expect = 3e-70
 Identities = 128/162 (79%), Positives = 143/162 (88%)
 Frame = +2

Query: 5    SRKSEWINPFLEGLCKYLSFSKLEVKADLKQGDXXXXXXXXXXXXFDRDKEFFATAGVNK 184
            SR+S WI+PFLEGLCKYLSF+KL++KADLKQGD            FDRD EFFATAGVNK
Sbjct: 542  SRQSGWISPFLEGLCKYLSFNKLKIKADLKQGDLLNSSNLVCSLSFDRDGEFFATAGVNK 601

Query: 185  KIKVFECDMILSENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSDFEGVVQVWDVTRS 364
            KIK+FECD I++ENRDIHYPVVE+A+RSKLSS+CWNSYIKSQIASS+FEGVVQVWD+TRS
Sbjct: 602  KIKIFECDAIINENRDIHYPVVEIATRSKLSSVCWNSYIKSQIASSNFEGVVQVWDITRS 661

Query: 365  QVFTEMREHERRVWSVDFSLADPTYLASGSDDGAVKLWNINQ 490
            QV TEMREHERRVWS+DFS ADPT LASGSDD +VKLWNINQ
Sbjct: 662  QVLTEMREHERRVWSIDFSSADPTTLASGSDDCSVKLWNINQ 703


>ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Vitis vinifera]
          Length = 903

 Score =  265 bits (678), Expect = 2e-69
 Identities = 129/160 (80%), Positives = 141/160 (88%)
 Frame = +2

Query: 11   KSEWINPFLEGLCKYLSFSKLEVKADLKQGDXXXXXXXXXXXXFDRDKEFFATAGVNKKI 190
            +S WINPFL+GLCKYLSFSKL+VKADLKQGD            FDRD E FATAGVNKKI
Sbjct: 560  QSGWINPFLDGLCKYLSFSKLKVKADLKQGDLLNSSNLVCSVSFDRDGELFATAGVNKKI 619

Query: 191  KVFECDMILSENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSDFEGVVQVWDVTRSQV 370
            KVFEC+ IL+E+RDIHYP+VEMA RSKLSSICWNSYIKSQIASS+FEGVVQVWDVTRSQV
Sbjct: 620  KVFECNSILNEDRDIHYPLVEMACRSKLSSICWNSYIKSQIASSNFEGVVQVWDVTRSQV 679

Query: 371  FTEMREHERRVWSVDFSLADPTYLASGSDDGAVKLWNINQ 490
             TEMREHERRVWS+D+SLADPT LASGSDDG+VKLW+INQ
Sbjct: 680  LTEMREHERRVWSIDYSLADPTMLASGSDDGSVKLWSINQ 719


>ref|XP_002274192.2| PREDICTED: protein SPA1-RELATED 3 [Vitis vinifera]
          Length = 906

 Score =  265 bits (678), Expect = 2e-69
 Identities = 127/159 (79%), Positives = 137/159 (86%)
 Frame = +2

Query: 14   SEWINPFLEGLCKYLSFSKLEVKADLKQGDXXXXXXXXXXXXFDRDKEFFATAGVNKKIK 193
            S WINPFLEGLCKYLSFS L+V+ADLKQGD            FDRD+EFFATAGVNKKIK
Sbjct: 562  SRWINPFLEGLCKYLSFSNLKVRADLKQGDLLNSPNLVCSLSFDRDREFFATAGVNKKIK 621

Query: 194  VFECDMILSENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSDFEGVVQVWDVTRSQVF 373
            +FECDMIL+ENRDIHYPV EMAS+SKLS ICWN YIK+QI SSDFEGVVQVWDV+RSQ F
Sbjct: 622  IFECDMILNENRDIHYPVTEMASQSKLSCICWNGYIKNQIVSSDFEGVVQVWDVSRSQRF 681

Query: 374  TEMREHERRVWSVDFSLADPTYLASGSDDGAVKLWNINQ 490
             EM+EHE+RVWSVDFSLADPT LASG DDGAVKLWNINQ
Sbjct: 682  MEMKEHEKRVWSVDFSLADPTKLASGGDDGAVKLWNINQ 720


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