BLASTX nr result

ID: Coptis21_contig00026327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026327
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323531.1| predicted protein [Populus trichocarpa] gi|2...    59   6e-07

>ref|XP_002323531.1| predicted protein [Populus trichocarpa] gi|222868161|gb|EEF05292.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
 Frame = +1

Query: 4   SFTNPSFTP----APPFGS---FLNSSKLPHHANGMKKVLTNYLGIDTKGKIAGNVVEGS 162
           +FT PSF+P    +P  G    F+ S K+P H  G+KKVLT+YL IDTKG+  G  +EG+
Sbjct: 409 AFTTPSFSPGQRISPVKGDRSPFMTSGKIPQHGLGVKKVLTDYLSIDTKGRDGGITIEGT 468

Query: 163 RSILSTRP 186
            +++   P
Sbjct: 469 DNVIRNTP 476


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