BLASTX nr result

ID: Coptis21_contig00026316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026316
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306441.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002327618.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_003629198.1| hypothetical protein MTR_8g074450 [Medicago ...    63   3e-08
gb|AFK49281.1| unknown [Lotus japonicus]                               62   6e-08
ref|XP_003538898.1| PREDICTED: uncharacterized protein LOC100816...    61   8e-08

>ref|XP_002306441.1| predicted protein [Populus trichocarpa] gi|222855890|gb|EEE93437.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/70 (51%), Positives = 49/70 (70%)
 Frame = +3

Query: 66  YHVRSTSLPSASHPLTARVEEELNKLRGWMMASKPSLLNTTTVLQDGFGGLIRLFERVED 245
           YHVRS SLPS SHP T R+EEELNKL+ W ++S     +T+  + +G  GL  L++ ++D
Sbjct: 5   YHVRSISLPSRSHPTTQRIEEELNKLKAWEVSSN----STSGSICNGLSGLEDLYKCMDD 60

Query: 246 LLQLSHTQQV 275
           LL L+ TQQV
Sbjct: 61  LLNLASTQQV 70


>ref|XP_002327618.1| predicted protein [Populus trichocarpa] gi|222836703|gb|EEE75096.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/70 (51%), Positives = 49/70 (70%)
 Frame = +3

Query: 66  YHVRSTSLPSASHPLTARVEEELNKLRGWMMASKPSLLNTTTVLQDGFGGLIRLFERVED 245
           YHVRS SLPS SHP T R+EEELNKL+ W ++S     +T+  + +G  GL  L++ ++D
Sbjct: 5   YHVRSISLPSRSHPTTQRIEEELNKLKAWEVSSN----STSGSICNGLSGLEDLYKCMDD 60

Query: 246 LLQLSHTQQV 275
           LL L+ TQQV
Sbjct: 61  LLNLASTQQV 70


>ref|XP_003629198.1| hypothetical protein MTR_8g074450 [Medicago truncatula]
           gi|355523220|gb|AET03674.1| hypothetical protein
           MTR_8g074450 [Medicago truncatula]
          Length = 290

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/70 (51%), Positives = 44/70 (62%)
 Frame = +3

Query: 66  YHVRSTSLPSASHPLTARVEEELNKLRGWMMASKPSLLNTTTVLQDGFGGLIRLFERVED 245
           YHVRS SLPS SHP T RVEEELNKL+ W   S     +T+  +  G   L  L+  +ED
Sbjct: 5   YHVRSISLPSRSHPSTIRVEEELNKLKTWEGTS----TSTSGSIHIGLSLLEDLYMSMED 60

Query: 246 LLQLSHTQQV 275
           LL ++ TQQV
Sbjct: 61  LLNMASTQQV 70


>gb|AFK49281.1| unknown [Lotus japonicus]
          Length = 310

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/69 (47%), Positives = 42/69 (60%)
 Frame = +3

Query: 66  YHVRSTSLPSASHPLTARVEEELNKLRGWMMASKPSLLNTTTVLQDGFGGLIRLFERVED 245
           Y  RS SLP+ SHP T ++EEEL KL+ W   S  S     T+   G  GLI L++ +ED
Sbjct: 17  YSARSISLPTRSHPSTIQIEEELIKLKSWESPSSSSTSKVETICY-GLSGLIELYKCIED 75

Query: 246 LLQLSHTQQ 272
           LL+L  TQQ
Sbjct: 76  LLKLPLTQQ 84


>ref|XP_003538898.1| PREDICTED: uncharacterized protein LOC100816620 [Glycine max]
          Length = 317

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/70 (47%), Positives = 43/70 (61%)
 Frame = +3

Query: 63  GYHVRSTSLPSASHPLTARVEEELNKLRGWMMASKPSLLNTTTVLQDGFGGLIRLFERVE 242
           GY +RS SLP+ SHP T  +EEELNKL+ W  +S   +      +  G  GL  L+E +E
Sbjct: 17  GYAIRSISLPTRSHPSTVPIEEELNKLKSWETSSSSEVER----IFFGLSGLANLYECME 72

Query: 243 DLLQLSHTQQ 272
           DLL+L  TQQ
Sbjct: 73  DLLKLPLTQQ 82


Top