BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026309
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76007.1| hypothetical protein VITISV_013341 [Vitis vinifera]   228   4e-58
ref|XP_003618546.1| Pentatricopeptide repeat-containing protein ...   138   4e-31
ref|XP_002512857.1| pentatricopeptide repeat-containing protein,...   137   7e-31
ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
ref|XP_002318647.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31

>emb|CAN76007.1| hypothetical protein VITISV_013341 [Vitis vinifera]
          Length = 666

 Score =  228 bits (581), Expect = 4e-58
 Identities = 103/160 (64%), Positives = 133/160 (83%), Gaps = 1/160 (0%)
 Frame = +1

Query: 7   CIPTPMWNATITGYVENSYFKEAWQVFRSMNEDGGTNPNSITMAIVLPLCTRSSMLLHGK 186
           C  T +WNATI GY+EN++  +AW VFRS+    G NPN++TM+IVLPLC RSS LL GK
Sbjct: 351 CNTTALWNATIAGYMENNFVSDAWDVFRSITHGEGINPNTVTMSIVLPLCARSSQLLSGK 410

Query: 187 EVHCYALKSGLDDELLVGNSLLDMYTKCGKLHLAENHFKKMI-KRNTVSWTAMIDGYGMH 363
           E+HCYAL++GLD E+ V N L+DMY+KCGKL LAEN F +M+ ++N +SWT+MIDG+G+H
Sbjct: 411 EIHCYALRNGLDQEIFVSNGLIDMYSKCGKLKLAENQFNRMMNEKNRISWTSMIDGHGIH 470

Query: 364 GDGEGAIKVFECLVRDNDVKPDHVTFVALISSCSHAGRVE 483
           GDGEGAI+VFE +VR+ +VKPDH+TFVALIS+CSHAG +E
Sbjct: 471 GDGEGAIRVFESMVRE-EVKPDHITFVALISACSHAGLLE 509



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 51/154 (33%), Positives = 86/154 (55%), Gaps = 7/154 (4%)
 Frame = +1

Query: 25  WNATITGYVENSYFKEAWQVFRSMNED-----GGTNPNSITMAIVLPLCTRSSMLLHGKE 189
           W+A I GY +NS  K+A  VF+ M  +        +P S T+  V   C +   ++ G++
Sbjct: 141 WSAVIAGYAQNSRPKDALFVFKEMRGECDEMGSPLSPMSHTITSVFSACGQLRDVILGEQ 200

Query: 190 VHCYALK--SGLDDELLVGNSLLDMYTKCGKLHLAENHFKKMIKRNTVSWTAMIDGYGMH 363
           +H Y +K  S ++++  VG+ ++DMY KCG   LA   F  ++ +  V WTA+I  Y  +
Sbjct: 201 IHGYVMKISSYVENDAFVGSVVVDMYGKCGFEELARFVFYSIVDKCVVVWTALIASYVCN 260

Query: 364 GDGEGAIKVFECLVRDNDVKPDHVTFVALISSCS 465
                AI+VF  ++ +  ++P+ VT  +LIS+CS
Sbjct: 261 ECPCPAIEVFREMIYEG-MEPNCVTLSSLISACS 293



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
 Frame = +1

Query: 22  MWNATITGYVENSYFKEAWQVFRSMNEDGGTNPNSITMAIVLPLCTRSSMLLHGKEVHCY 201
           +W A I  YV N     A +VFR M  +G   PN +T++ ++  C++   L+ GKE+H +
Sbjct: 249 VWTALIASYVCNECPCPAIEVFREMIYEG-MEPNCVTLSSLISACSQIPDLMLGKEIHGF 307

Query: 202 AL--KSGLDDELLVGNSLLDMYTKCGKLHLAENHFKKMIK----RNTVSWTAMIDGYGMH 363
               ++    ++ +  SL+DMY KC  +      F+K         T  W A I GY  +
Sbjct: 308 ITRRRAATTPDVFISTSLIDMYGKCNYMVYGHRIFEKDKTYPRCNTTALWNATIAGYMEN 367

Query: 364 GDGEGAIKVFECLVRDNDVKPDHVTFVALISSCSHAGRV 480
                A  VF  +     + P+ VT   ++  C+ + ++
Sbjct: 368 NFVSDAWDVFRSITHGEGINPNTVTMSIVLPLCARSSQL 406


>ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355493561|gb|AES74764.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 637

 Score =  138 bits (348), Expect = 4e-31
 Identities = 70/154 (45%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
 Frame = +1

Query: 25  WNATITGYVENSYFKEAWQVFRSMNEDGGTNPNSITMAIVLPLCTRSSMLLHGKEVHCYA 204
           W   I GYV N + KEA+ + + M    G   + +T+  VL  C++S  +  G+ VHCYA
Sbjct: 223 WTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYA 282

Query: 205 LKS-GLDDELLVGNSLLDMYTKCGKLHLAENHFKKMIKRNTVSWTAMIDGYGMHGDGEGA 381
           +K  GLD  ++VG SL+DMY KCG+++ A + F+ M+KRN V+W AM+ G  MHG G+ A
Sbjct: 283 VKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLAMHGMGKIA 342

Query: 382 IKVFECLVRDNDVKPDHVTFVALISSCSHAGRVE 483
           + +F  +V   +VKPD VTF+AL+S+CSH+G VE
Sbjct: 343 VDMFPSMV--EEVKPDGVTFMALLSACSHSGLVE 374


>ref|XP_002512857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547868|gb|EEF49360.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 454

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/153 (41%), Positives = 100/153 (65%)
 Frame = +1

Query: 25  WNATITGYVENSYFKEAWQVFRSMNEDGGTNPNSITMAIVLPLCTRSSMLLHGKEVHCYA 204
           WN+ I  Y +N    EA++VF  M + G    N++T++ +L  C  S  L  GK +H   
Sbjct: 261 WNSMIAVYAQNGLSSEAFEVFHGMIKYGYVKYNAVTLSTLLLACAHSGALQTGKCIHDQV 320

Query: 205 LKSGLDDELLVGNSLLDMYTKCGKLHLAENHFKKMIKRNTVSWTAMIDGYGMHGDGEGAI 384
           ++ GLDD ++VG SL+DMY KCG++ +A   F  M ++N  SWTAM+ GYGMHG    A+
Sbjct: 321 IRMGLDDNVIVGTSLIDMYCKCGRVQMARKTFDGMKEKNVKSWTAMVAGYGMHGCAREAL 380

Query: 385 KVFECLVRDNDVKPDHVTFVALISSCSHAGRVE 483
            +F  ++R + VKP+++TFV+++++CSHAG ++
Sbjct: 381 NIFYKMIR-SGVKPNYITFVSVLAACSHAGLLD 412



 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/162 (31%), Positives = 94/162 (58%), Gaps = 8/162 (4%)
 Frame = +1

Query: 22  MWNATITGYVENSYFKEAWQVFRS-MNEDGGTNP-------NSITMAIVLPLCTRSSMLL 177
           +W + ITGY++N +  EA  +F+  + E+   N        +S+ M  VL  C+R S   
Sbjct: 150 IWTSMITGYIQNDHAHEALLLFKQFLIEESERNEEKDEVLMDSVAMVSVLSACSRISGKG 209

Query: 178 HGKEVHCYALKSGLDDELLVGNSLLDMYTKCGKLHLAENHFKKMIKRNTVSWTAMIDGYG 357
             K VH + +K GLD+++ + N+LLD Y KCG++ ++   F ++++++ +SW +MI  Y 
Sbjct: 210 MTKGVHGFVVKKGLDEDVGIENTLLDAYAKCGEVGVSRQVFDEIVEKDAISWNSMIAVYA 269

Query: 358 MHGDGEGAIKVFECLVRDNDVKPDHVTFVALISSCSHAGRVE 483
            +G    A +VF  +++   VK + VT   L+ +C+H+G ++
Sbjct: 270 QNGLSSEAFEVFHGMIKYGYVKYNAVTLSTLLLACAHSGALQ 311



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
 Frame = +1

Query: 25  WNATITGYVENSYFKEAWQVFRSMNEDGGTNPNSITMAIVLPLCTRSSMLLHGKEVHCYA 204
           WN+ I     +    E+ + F SM +     PN  T    +  C+    L  GK+ H  A
Sbjct: 50  WNSLIADLARSGDSIESLRAFYSMRKLN-LKPNRSTFPCAIKACSSLLDLHWGKQTHQQA 108

Query: 205 LKSGLDDELLVGNSLLDMYTKCGKLHLAENHFKKMIKRNTVSWTAMIDGYGMHGDGEGAI 384
           L  G + +L V ++L+DMY+KCG+L  A   F ++  RN V WT+MI GY  +     A+
Sbjct: 109 LVFGFESDLFVSSALVDMYSKCGRLSDARILFDEITHRNIVIWTSMITGYIQNDHAHEAL 168

Query: 385 KVFECLV--------RDNDVKPDHVTFVALISSCS 465
            +F+  +          ++V  D V  V+++S+CS
Sbjct: 169 LLFKQFLIEESERNEEKDEVLMDSVAMVSVLSACS 203


>ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/153 (44%), Positives = 105/153 (68%), Gaps = 1/153 (0%)
 Frame = +1

Query: 25  WNATITGYVENSYFKEAWQVFRSMNEDGGTNPNSITMAIVLPLCTRSSMLLHGKEVHCYA 204
           WNA ++GY     ++E   +FR M ++G   PN +T+A VLPLC R + L HGKE HCY 
Sbjct: 386 WNAMLSGYAHMDRYEEVTFLFREMLQEG-MEPNYVTIASVLPLCARIANLQHGKEFHCYI 444

Query: 205 LK-SGLDDELLVGNSLLDMYTKCGKLHLAENHFKKMIKRNTVSWTAMIDGYGMHGDGEGA 381
           +K    ++ LL+ N+L+DMY++ G++  A   F  + KR+ V++T+MI GYGM G+GE  
Sbjct: 445 MKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETT 504

Query: 382 IKVFECLVRDNDVKPDHVTFVALISSCSHAGRV 480
           +K+FE + +  ++KPDHVT VA++++CSH+G V
Sbjct: 505 LKLFEEMCK-LEIKPDHVTMVAVLTACSHSGLV 536



 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 47/150 (31%), Positives = 76/150 (50%)
 Frame = +1

Query: 25  WNATITGYVENSYFKEAWQVFRSMNEDGGTNPNSITMAIVLPLCTRSSMLLHGKEVHCYA 204
           WN  I+ YV N +F EA  V+++M       P+  T   VL  C  S     G EVH   
Sbjct: 150 WNLLISAYVRNGFFVEALCVYKNMLNKK-IEPDEYTYPSVLKACGESLDFNSGLEVHRSI 208

Query: 205 LKSGLDDELLVGNSLLDMYTKCGKLHLAENHFKKMIKRNTVSWTAMIDGYGMHGDGEGAI 384
             S ++  L V N+L+ MY + GKL +A + F  M +R++VSW  +I  Y   G  + A 
Sbjct: 209 EASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAF 268

Query: 385 KVFECLVRDNDVKPDHVTFVALISSCSHAG 474
           ++F  + ++  V+ + + +  +   C H+G
Sbjct: 269 QLFGSM-QEEGVEMNVIIWNTIAGGCLHSG 297



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 33/186 (17%)
 Frame = +1

Query: 25  WNATITGYVENSYFKEAWQVFRSMNEDG-------------------------------- 108
           WN  I+ Y     +KEA+Q+F SM E+G                                
Sbjct: 251 WNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMR 310

Query: 109 -GTNPNSITMAIVLPLCTRSSMLLHGKEVHCYALKSGLDDELLVGNSLLDMYTKCGKLHL 285
              + ++I M + L  C+    +  GKE+H +A+++  D    V N+L+ MY++C  L  
Sbjct: 311 TSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGH 370

Query: 286 AENHFKKMIKRNTVSWTAMIDGYGMHGDGEGAIKVFECLVRDNDVKPDHVTFVALISSCS 465
           A   F +  ++  ++W AM+ GY      E    +F  ++++  ++P++VT  +++  C+
Sbjct: 371 AFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEG-MEPNYVTIASVLPLCA 429

Query: 466 HAGRVE 483
               ++
Sbjct: 430 RIANLQ 435


>ref|XP_002318647.1| predicted protein [Populus trichocarpa] gi|222859320|gb|EEE96867.1|
           predicted protein [Populus trichocarpa]
          Length = 744

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/153 (41%), Positives = 99/153 (64%)
 Frame = +1

Query: 25  WNATITGYVENSYFKEAWQVFRSMNEDGGTNPNSITMAIVLPLCTRSSMLLHGKEVHCYA 204
           WNA I+G+ +N    EA + FR M +     PN++TMA +L +CT  S+++  KEVHCY 
Sbjct: 418 WNALISGFAQNKCADEALKAFRDM-QSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYL 476

Query: 205 LKSGLDDELLVGNSLLDMYTKCGKLHLAENHFKKMIKRNTVSWTAMIDGYGMHGDGEGAI 384
           L+   +   LV NSL+  Y KCG +H +   F+K+  RN V+W +++ G+GMHG  +   
Sbjct: 477 LRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMF 536

Query: 385 KVFECLVRDNDVKPDHVTFVALISSCSHAGRVE 483
             FE  +++ ++KPDH TF +L+SSCSH+G+V+
Sbjct: 537 ATFE-KMKEANIKPDHGTFTSLLSSCSHSGKVD 568



 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/149 (30%), Positives = 78/149 (52%)
 Frame = +1

Query: 22  MWNATITGYVENSYFKEAWQVFRSMNEDGGTNPNSITMAIVLPLCTRSSMLLHGKEVHCY 201
           MW + +    +N Y  EA + F     D G  P+ + +   L  C+  S+   G  +H +
Sbjct: 316 MWGSVMLNCAQNGYPNEALEFFSEFMLDCGF-PDPVILLAALRACSFLSLKPRGMAIHGF 374

Query: 202 ALKSGLDDELLVGNSLLDMYTKCGKLHLAENHFKKMIKRNTVSWTAMIDGYGMHGDGEGA 381
           A+K G D ++ VG +L+D Y KCG +  A+  F  +  R+ VSW A+I G+  +   + A
Sbjct: 375 AIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEA 434

Query: 382 IKVFECLVRDNDVKPDHVTFVALISSCSH 468
           +K F  + +   +KP+ VT   ++S C+H
Sbjct: 435 LKAFRDM-QSKQIKPNTVTMACILSVCTH 462



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 51/148 (34%), Positives = 79/148 (53%)
 Frame = +1

Query: 22  MWNATITGYVENSYFKEAWQVFRSMNEDGGTNPNSITMAIVLPLCTRSSMLLHGKEVHCY 201
           +WN  I GYV N     A ++F  M E G  +P+S T+ +VL LC++   L  GK++H  
Sbjct: 215 VWNVMILGYVSNECLSLALELFVEMLELG-ISPDSSTVVVVLVLCSQLLDLAVGKQIHGL 273

Query: 202 ALKSGLDDELLVGNSLLDMYTKCGKLHLAENHFKKMIKRNTVSWTAMIDGYGMHGDGEGA 381
            L  GLDD++ VG +L++MY KCG    +   FK+    N V W +++     +G    A
Sbjct: 274 ILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEA 333

Query: 382 IKVFECLVRDNDVKPDHVTFVALISSCS 465
           ++ F   + D    PD V  +A + +CS
Sbjct: 334 LEFFSEFMLDCGF-PDPVILLAALRACS 360



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 6/153 (3%)
 Frame = +1

Query: 25  WNATITGYVENSYFKEAWQVFRSM-NEDGGTNPNSITMAIVLPLCTRSSMLLHGKEVHCY 201
           WN  I+G+ ++  + ++  +FR M  E GG+  N +     L  C     L HG E+H +
Sbjct: 108 WNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGF 167

Query: 202 ALKSGLDDELLVGNSLLDMYTKCGKLHLAENHFKK-----MIKRNTVSWTAMIDGYGMHG 366
            +K G+D +  + ++L++MY KCG +  AEN F++     ++ RN   W  MI GY  + 
Sbjct: 168 LVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNE 227

Query: 367 DGEGAIKVFECLVRDNDVKPDHVTFVALISSCS 465
               A+++F  ++ +  + PD  T V ++  CS
Sbjct: 228 CLSLALELFVEML-ELGISPDSSTVVVVLVLCS 259



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
 Frame = +1

Query: 28  NATITGYVENSYFKEAWQVFRSMNEDGGTNPNSITMAIVLPLCTRSSMLLHGKEVHCYAL 207
           N  I    E+ +F++A +V+    E G           ++        +  GK++H + L
Sbjct: 7   NRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLL 66

Query: 208 KSGLDDELLVGNSLLDMYTKCGKLHLAENHFKKMIKRNTVSWTAMIDGYGMHGDGEGAIK 387
           K G   ++ V NSLL MY KCG    A + F++M +R++VSW  MI G+   GD   ++ 
Sbjct: 67  KFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLV 126

Query: 388 VFECLVRD-NDVKPDHVTFVALISSCS 465
           +F  +V++      + V  +A +SSC+
Sbjct: 127 MFRRMVKECGGSYHNRVACLAALSSCA 153