BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026299
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   149   2e-34
emb|CAN76947.1| hypothetical protein VITISV_017166 [Vitis vinifera]   147   9e-34
gb|AAU90288.2| Polyprotein, putative [Solanum demissum]               146   1e-33
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   146   2e-33
emb|CAN83798.1| hypothetical protein VITISV_039072 [Vitis vinifera]   145   3e-33

>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  149 bits (377), Expect = 2e-34
 Identities = 69/111 (62%), Positives = 84/111 (75%)
 Frame = +1

Query: 34   TTASKEPTCYSQAVKHPTWRSAMTDEFNALLKNHTWSLVPPSSTQNTVDCKWVFKLKLKA 213
            T  +  PT  SQA+K   WR AM+DE++AL++N TW LVPP    N V CKW+F++K  +
Sbjct: 840  TFQTTTPTSISQALKDQNWRQAMSDEYDALVRNGTWELVPPEDITNLVGCKWIFRIKRNS 899

Query: 214  DGSIERPKARLVAKGFHQQLGIDYDETFSPVVKPVTIRTVLSIATSNGWFL 366
            DGSI+R KARLVAKGFHQ+ G+DY ETFSPVVKP T+R VLSIA SNGW L
Sbjct: 900  DGSIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSIAVSNGWSL 950


>emb|CAN76947.1| hypothetical protein VITISV_017166 [Vitis vinifera]
          Length = 548

 Score =  147 bits (371), Expect = 9e-34
 Identities = 72/114 (63%), Positives = 80/114 (70%)
 Frame = +1

Query: 25  AELTTASKEPTCYSQAVKHPTWRSAMTDEFNALLKNHTWSLVPPSSTQNTVDCKWVFKLK 204
           A +    KEPTCYS  VKH   R AM  EF+ALL N TW+LVP     N VDCKWV+K+K
Sbjct: 2   ATIQPPEKEPTCYSTTVKHSNXREAMNKEFDALLANGTWTLVPKPXYANLVDCKWVYKIK 61

Query: 205 LKADGSIERPKARLVAKGFHQQLGIDYDETFSPVVKPVTIRTVLSIATSNGWFL 366
            K DG IER KA LVAKGFHQ  G+D+ ETFSPVVKP TIR VLS+A S GW L
Sbjct: 62  RKXDGGIERFKACLVAKGFHQHEGVDFGETFSPVVKPTTIRMVLSLAVSRGWHL 115


>gb|AAU90288.2| Polyprotein, putative [Solanum demissum]
          Length = 1017

 Score =  146 bits (369), Expect = 1e-33
 Identities = 66/109 (60%), Positives = 89/109 (81%)
 Frame = +1

Query: 34  TTASKEPTCYSQAVKHPTWRSAMTDEFNALLKNHTWSLVPPSSTQNTVDCKWVFKLKLKA 213
           T+A  EP+C+S+A+K   WR AM++E+NAL++N TW LVP S +QN + CKWVFK KLK+
Sbjct: 630 TSAIVEPSCHSRAIKDVHWRHAMSEEYNALIQNGTWELVPLSPSQNIIGCKWVFKRKLKS 689

Query: 214 DGSIERPKARLVAKGFHQQLGIDYDETFSPVVKPVTIRTVLSIATSNGW 360
           DGS++R KARLVAKG+HQ+ G+D+ +TFSPVVKP TIR +LS+A S+ W
Sbjct: 690 DGSLDRYKARLVAKGYHQRPGLDFADTFSPVVKPATIRLLLSLAVSHQW 738


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  146 bits (368), Expect = 2e-33
 Identities = 70/106 (66%), Positives = 82/106 (77%)
 Frame = +1

Query: 49   EPTCYSQAVKHPTWRSAMTDEFNALLKNHTWSLVPPSSTQNTVDCKWVFKLKLKADGSIE 228
            EP+  S+A+  P WR+AM  EF AL KN+TW+LVPP  T+N +DCKWVFK+K  ADGSI+
Sbjct: 924  EPSSVSEALADPQWRAAMEAEFQALQKNNTWTLVPPDRTRNLIDCKWVFKVKYNADGSID 983

Query: 229  RPKARLVAKGFHQQLGIDYDETFSPVVKPVTIRTVLSIATSNGWFL 366
            R KARLVAKGF QQ GIDYD+TFSPVVK  TIR VLS+A S  W L
Sbjct: 984  RLKARLVAKGFKQQYGIDYDDTFSPVVKHSTIRLVLSLAVSQKWSL 1029


>emb|CAN83798.1| hypothetical protein VITISV_039072 [Vitis vinifera]
          Length = 787

 Score =  145 bits (367), Expect = 3e-33
 Identities = 73/123 (59%), Positives = 87/123 (70%), Gaps = 4/123 (3%)
 Frame = +1

Query: 10  PKALAAELTTASK----EPTCYSQAVKHPTWRSAMTDEFNALLKNHTWSLVPPSSTQNTV 177
           PK L A+   +S+    EPT Y QA +H  WR AM  EF ALL N+TW+LVPP+  Q  +
Sbjct: 427 PKLLLADYGASSELDLFEPTTYHQAARHAHWRQAMDTEFYALLNNNTWTLVPPTLGQKVI 486

Query: 178 DCKWVFKLKLKADGSIERPKARLVAKGFHQQLGIDYDETFSPVVKPVTIRTVLSIATSNG 357
            CKWVFK+KLK DGS+E  KARLVAKGFHQ  G+DY ETFSP+VKP TIR VLS+A +  
Sbjct: 487 GCKWVFKIKLKPDGSVECYKARLVAKGFHQTHGLDYFETFSPIVKPTTIRIVLSLALTFY 546

Query: 358 WFL 366
           W L
Sbjct: 547 WSL 549