BLASTX nr result

ID: Coptis21_contig00026297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026297
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    77   3e-12
gb|AFW82503.1| hypothetical protein ZEAMMB73_671392 [Zea mays]         74   3e-11
ref|XP_002441395.1| hypothetical protein SORBIDRAFT_09g025860 [S...    73   6e-11
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    73   6e-11
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    70   3e-10

>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 44/126 (34%), Positives = 60/126 (47%)
 Frame = -1

Query: 379 WIKWASAAEGSFMLNTDGSVQETGNGFGGIIRDALGNVTLAFAGSSPKPSVLYQELLIIV 200
           W  W     G   LNTDGSV     GFGG++RD  GN   AF   +P   +   EL  I 
Sbjct: 271 WCIWKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIW 330

Query: 199 KGMQYAKEIGITELEVNSDSSVAISIIRGPSKSPWHCSNLVAHIEALRNQFVKCSFNHVY 20
           +G+  A  +GI  + V SDS  A+  I          +  + HI AL  +F +   +H +
Sbjct: 331 RGLVLALGLGIKVIWVESDSMSAVKTINRVQSHSGKANRCLNHIWALLKKFEEYKVSHAW 390

Query: 19  REGNQA 2
           RE N+A
Sbjct: 391 RETNKA 396


>gb|AFW82503.1| hypothetical protein ZEAMMB73_671392 [Zea mays]
          Length = 208

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 45/127 (35%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
 Frame = -1

Query: 376 IKWASAAEGSFMLNTDGSVQETGNG---FGGIIRDALGNVTLAFAGSSPKPSVLYQELLI 206
           +KW+    G F LN DGSV   G+     GG+IRD+ G V LAFA  +   +V   E   
Sbjct: 37  VKWSPPPRGWFKLNFDGSVYHDGSARASVGGVIRDSAGRVVLAFAEPTEHSTVGIVEARA 96

Query: 205 IVKGMQYAKEIGITELEVNSDSSVAISIIRGPSKSPWHCSNLVAHIEALRNQFVKCSFNH 26
           ++ G++ A  + +  L V  D  V + ++RG        + L   I  L   F  C   H
Sbjct: 97  MICGLRLALGLRLQRLVVEGDDLVLVQLLRGEETQTRIPAALHEEILGLLRCFSGCDVRH 156

Query: 25  VYREGNQ 5
           VYREGNQ
Sbjct: 157 VYREGNQ 163


>ref|XP_002441395.1| hypothetical protein SORBIDRAFT_09g025860 [Sorghum bicolor]
           gi|241946680|gb|EES19825.1| hypothetical protein
           SORBIDRAFT_09g025860 [Sorghum bicolor]
          Length = 210

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
 Frame = -1

Query: 376 IKWASAAEGSFMLNTDGSVQETGNG---FGGIIRDALGNVTLAFAGSSPKPSVLYQELLI 206
           ++W+    G F LN DGSV   G+     GG IRD+ G V LAFA  +   +V   E   
Sbjct: 40  VQWSPPPRGWFKLNFDGSVYHDGSARASVGGAIRDSAGRVVLAFAEPTEHSTVGIVEARA 99

Query: 205 IVKGMQYAKEIGITELEVNSDSSVAISIIRGPSKSPWHCSNLVAHIEALRNQFVKCSFNH 26
           +++G++ A  + +  L V  D  V + ++RG          L   I  L   F  C   H
Sbjct: 100 MIRGLRLALGLRLQRLVVEGDDLVLVQLLRGEETQTRIPVALQEEIRGLLRCFSGCDVRH 159

Query: 25  VYREGNQ 5
           VYREGNQ
Sbjct: 160 VYREGNQ 166


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 59/217 (27%), Positives = 89/217 (41%), Gaps = 5/217 (2%)
 Frame = -1

Query: 637 LCRINSSSVDIYKACIGATVHEILYHSSVRKKENQKILAQQLSIKILSDMQLYLQRNLSD 458
           LC I +SS    K  +    H+       R  E  +    + S+ + S+  + L  N + 
Sbjct: 184 LCLITTSSEKHLKNHLQGKEHKAKEEEEERANELVRKTKVKSSLTLDSNDPMVLLGNFNG 243

Query: 457 VKESVSLRFLAARLGLKLNFKESTP-----NWIKWASAAEGSFMLNTDGSVQETGNGFGG 293
           +          A L L+      TP      W  W     G   LNTDGS+     GFGG
Sbjct: 244 I----------ALLNLERLHNFLTPVARSIRWYSWEKPEFGWTKLNTDGSIDRGNAGFGG 293

Query: 292 IIRDALGNVTLAFAGSSPKPSVLYQELLIIVKGMQYAKEIGITELEVNSDSSVAISIIRG 113
           + RD  G+   A+A  + +  +   EL  I +G+  A  +GI  + V SDS  A+  I  
Sbjct: 294 LFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIKAIWVESDSMSAVKTINR 353

Query: 112 PSKSPWHCSNLVAHIEALRNQFVKCSFNHVYREGNQA 2
                    + + HI  L  +F K   +H +RE N+A
Sbjct: 354 KQPYSSRAGSCLNHIWVLLEKFEKYLVSHTWRETNKA 390


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 40/126 (31%), Positives = 58/126 (46%)
 Frame = -1

Query: 379 WIKWASAAEGSFMLNTDGSVQETGNGFGGIIRDALGNVTLAFAGSSPKPSVLYQELLIIV 200
           W  W     G   LNTDGS+     GFGG+ RD  G+   A+A  + +  +   EL  I 
Sbjct: 152 WYSWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIW 211

Query: 199 KGMQYAKEIGITELEVNSDSSVAISIIRGPSKSPWHCSNLVAHIEALRNQFVKCSFNHVY 20
           +G+  A  +GI  + V SDS   +  I           + + HI  L  +F K   +H +
Sbjct: 212 RGLVLASGLGIKAIWVESDSMSVVKTINRKQPYSSRAGSCLNHIWVLLGKFEKYRVSHTW 271

Query: 19  REGNQA 2
           RE N+A
Sbjct: 272 RETNKA 277


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