BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026285
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containi...   125   3e-27
emb|CBI24193.3| unnamed protein product [Vitis vinifera]              125   3e-27
ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26
emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]   120   9e-26
ref|XP_002310674.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/66 (86%), Positives = 59/66 (89%)
 Frame = -3

Query: 200  ERLALAFSLIGTPEGSTIRIFKNLRVCGDCHSVYKFVSSVVQRKIVLRDPYRFHHFSGGN 21
            ERLALAF LI TPE ST+RIFKNLRVCGDCHSVYKFVS +V RKIVLRDPYRFHHFSGG 
Sbjct: 1658 ERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGK 1717

Query: 20   CSCSDY 3
            CSC DY
Sbjct: 1718 CSCGDY 1723


>emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/66 (86%), Positives = 59/66 (89%)
 Frame = -3

Query: 200  ERLALAFSLIGTPEGSTIRIFKNLRVCGDCHSVYKFVSSVVQRKIVLRDPYRFHHFSGGN 21
            ERLALAF LI TPE ST+RIFKNLRVCGDCHSVYKFVS +V RKIVLRDPYRFHHFSGG 
Sbjct: 1017 ERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGK 1076

Query: 20   CSCSDY 3
            CSC DY
Sbjct: 1077 CSCGDY 1082


>ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus] gi|449497665|ref|XP_004160467.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  121 bits (304), Expect = 5e-26
 Identities = 54/66 (81%), Positives = 59/66 (89%)
 Frame = -3

Query: 200  ERLALAFSLIGTPEGSTIRIFKNLRVCGDCHSVYKFVSSVVQRKIVLRDPYRFHHFSGGN 21
            ER+ALAF LI  PEGST+RIFKNLRVCGDCHS +KFVS V+ RKIVLRDPYRFHHF+ GN
Sbjct: 872  ERIALAFGLINIPEGSTVRIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFHHFTNGN 931

Query: 20   CSCSDY 3
            CSCSDY
Sbjct: 932  CSCSDY 937


>emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  120 bits (302), Expect = 9e-26
 Identities = 55/63 (87%), Positives = 57/63 (90%)
 Frame = -3

Query: 200  ERLALAFSLIGTPEGSTIRIFKNLRVCGDCHSVYKFVSSVVQRKIVLRDPYRFHHFSGGN 21
            ERLALAF LI TPE ST+RIFKNLRVCGDCHSVYKFVS +V RKIVLRDPYRFHHFSGG 
Sbjct: 1008 ERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGK 1067

Query: 20   CSC 12
            CSC
Sbjct: 1068 CSC 1070


>ref|XP_002310674.1| predicted protein [Populus trichocarpa] gi|222853577|gb|EEE91124.1|
            predicted protein [Populus trichocarpa]
          Length = 908

 Score =  119 bits (297), Expect = 3e-25
 Identities = 52/66 (78%), Positives = 59/66 (89%)
 Frame = -3

Query: 200  ERLALAFSLIGTPEGSTIRIFKNLRVCGDCHSVYKFVSSVVQRKIVLRDPYRFHHFSGGN 21
            ERLALA+ LI +PEGST++IFKNLRVCGDCHSVYKF S ++ RKIVLRDPYRFH FSGG 
Sbjct: 842  ERLALAYGLISSPEGSTLKIFKNLRVCGDCHSVYKFASGILGRKIVLRDPYRFHQFSGGQ 901

Query: 20   CSCSDY 3
            CSC+DY
Sbjct: 902  CSCTDY 907