BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026268
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513855.1| pentatricopeptide repeat-containing protein,...   138   4e-31
emb|CBI19104.3| unnamed protein product [Vitis vinifera]              138   5e-31
ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containi...   138   5e-31
ref|XP_002307403.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_003556682.1| PREDICTED: pentatricopeptide repeat-containi...   123   1e-26

>ref|XP_002513855.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546941|gb|EEF48438.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 498

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/90 (70%), Positives = 75/90 (83%)
 Frame = -3

Query: 272 DDEVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVKGNWSNLILDSAI 93
           DDE L LF EL+ENGV  N++TFVC+LN+C++RLD E G+QIHACVVKGNW NLI+DSAI
Sbjct: 48  DDEALRLFSELIENGVTANNRTFVCILNVCSKRLDFELGRQIHACVVKGNWRNLIVDSAI 107

Query: 92  VFFYAQCGDLSSSFRAFNMMGERDVVSWTS 3
           V FYAQCGDL S+F AF  + E+DVV WTS
Sbjct: 108 VSFYAQCGDLESAFCAFFQVREKDVVCWTS 137



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/90 (31%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = -3

Query: 269 DEVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVKGNW-SNLILDSAI 93
           +E   +F +++  G  PN  T   +L  C  +  ++FG+Q+H  +VKG +  ++ + +++
Sbjct: 149 EEAFRMFSQMLGEGFLPNEFTVCAILKACGEKKALKFGRQLHCAIVKGMYKDDVFIGTSL 208

Query: 92  VFFYAQCGDLSSSFRAFNMMGERDVVSWTS 3
           V  YA+CG++  S   F+ M +R+ V+WTS
Sbjct: 209 VDMYAKCGEMIDSKEVFDGMRKRNTVTWTS 238



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = -3

Query: 266 EVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVKGNWS-NLILDSAIV 90
           E LE   E+++ GVEPN  T+   L  C     +  GK IH+   K   S N+ + SA++
Sbjct: 352 EALEFLKEMMDEGVEPNEFTYSSALKACANLESVLQGKLIHSFANKTPASSNVYVGSALI 411

Query: 89  FFYAQCGDLSSSFRAFNMMGERDVVSW 9
           + Y++CG LS + + F+ M ER+++SW
Sbjct: 412 YMYSKCGYLSDAIQVFDSMPERNLISW 438



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
 Frame = -3

Query: 269 DEVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVK-GNWSNLILDSAI 93
           +E + LF  +    +  N+ T V VL  C        G+++HA ++K G  SN+ L S +
Sbjct: 250 EEAIRLFRVMKRRKIISNNLTVVSVLRACGSISASLTGREVHAQIIKSGIQSNVYLGSTL 309

Query: 92  VFFYAQCGDLSSSFRAFNMMGERDVVSWTS 3
           V+FY +CG+ + + +    M  R+VVSWT+
Sbjct: 310 VWFYCKCGEFNIASKVLQQMSFRNVVSWTA 339


>emb|CBI19104.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score =  138 bits (347), Expect = 5e-31
 Identities = 62/90 (68%), Positives = 73/90 (81%)
 Frame = -3

Query: 272 DDEVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVKGNWSNLILDSAI 93
           DDE L LF + +ENGV  N KTFVCVLNLC++RLD E G+QIHAC+VK NW NLI+DSA+
Sbjct: 145 DDEALRLFDDCIENGVRANGKTFVCVLNLCSKRLDFELGRQIHACIVKDNWRNLIVDSAL 204

Query: 92  VFFYAQCGDLSSSFRAFNMMGERDVVSWTS 3
           V FYAQCGDLS +F AF+ M ERDVV WT+
Sbjct: 205 VCFYAQCGDLSGAFHAFDQMPERDVVCWTT 234



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266 EVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVKGNW-SNLILDSAIV 90
           E L +F +++ N   PN  T   VL  C     +EFGKQ+H  ++K  +  ++ + +++V
Sbjct: 247 EALSMFSQMMFNTSSPNEFTVCSVLKACGEEKALEFGKQLHGAIIKKMFKEDVFIGTSLV 306

Query: 89  FFYAQCGDLSSSFRAFNMMGERDVVSWTS 3
             YA+CG++  S + F+ M +R+ V+WTS
Sbjct: 307 GMYAKCGEILDSRKVFDGMKKRNTVTWTS 335


>ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18520-like [Vitis vinifera]
          Length = 595

 Score =  138 bits (347), Expect = 5e-31
 Identities = 62/90 (68%), Positives = 73/90 (81%)
 Frame = -3

Query: 272 DDEVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVKGNWSNLILDSAI 93
           DDE L LF + +ENGV  N KTFVCVLNLC++RLD E G+QIHAC+VK NW NLI+DSA+
Sbjct: 145 DDEALRLFDDCIENGVRANGKTFVCVLNLCSKRLDFELGRQIHACIVKDNWRNLIVDSAL 204

Query: 92  VFFYAQCGDLSSSFRAFNMMGERDVVSWTS 3
           V FYAQCGDLS +F AF+ M ERDVV WT+
Sbjct: 205 VCFYAQCGDLSGAFHAFDQMPERDVVCWTT 234



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266 EVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVKGNW-SNLILDSAIV 90
           E L +F +++ N   PN  T   VL  C     +EFGKQ+H  ++K  +  ++ + +++V
Sbjct: 247 EALSMFSQMMFNTSSPNEFTVCSVLKACGEEKALEFGKQLHGAIIKKMFKEDVFIGTSLV 306

Query: 89  FFYAQCGDLSSSFRAFNMMGERDVVSWTS 3
             YA+CG++  S + F+ M +R+ V+WTS
Sbjct: 307 GMYAKCGEILDSRKVFDGMKKRNTVTWTS 335



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = -3

Query: 272 DDEVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVKG-NWSNLILDSA 96
           + E LE   E++E GVEPN  T+   L  C     I  GK IH+ V K    SN+ + SA
Sbjct: 447 EPEALEFLKEMLEEGVEPNPFTYSSALKACAHLEAILQGKLIHSSVNKTLALSNVFVGSA 506

Query: 95  IVFFYAQCGDLSSSFRAFNMMGERDVVSW 9
           ++  YA+CG +S + + F+ M +R++VSW
Sbjct: 507 LINMYAKCGYVSEAIQVFDSMPQRNLVSW 535



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
 Frame = -3

Query: 269 DEVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVKGNW-SNLILDSAI 93
           +E + LF  +    +  N+ T V +L  C    ++  GK++HA ++K +  SN+ + S +
Sbjct: 347 EEAISLFRVMKRRKIFANNLTVVSILRACGSTRNLLMGKEVHAQIMKNSMQSNIYIGSTL 406

Query: 92  VFFYAQCGDLSSSFRAFNMMGERDVVSWTS 3
           V+FY +C +   + +    M  RDVVSWT+
Sbjct: 407 VWFYCKCEEHPFASKVLQNMPLRDVVSWTA 436


>ref|XP_002307403.1| predicted protein [Populus trichocarpa] gi|222856852|gb|EEE94399.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/90 (67%), Positives = 74/90 (82%)
 Frame = -3

Query: 272 DDEVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVKGNWSNLILDSAI 93
           DDE L  F + +++GV PNSKTFVCVLNLC+RRLD E G+Q+HA VVKGNW NLI+DSA+
Sbjct: 22  DDEALSYFSQAIKDGVVPNSKTFVCVLNLCSRRLDFELGRQVHARVVKGNWRNLIVDSAV 81

Query: 92  VFFYAQCGDLSSSFRAFNMMGERDVVSWTS 3
           V+FY QCGDL S+F  F+ M ERDVVSWT+
Sbjct: 82  VYFYVQCGDLKSAFCVFDRMVERDVVSWTT 111



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = -3

Query: 272 DDEVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVKGNWS-NLILDSA 96
           + E LE   E++E GVEPNS T+   L  C     +  GK IH+   K   S N+ + SA
Sbjct: 324 ESEALEFLKEMMEEGVEPNSFTYSSALKACANLETVLQGKLIHSSANKTPASSNVFVGSA 383

Query: 95  IVFFYAQCGDLSSSFRAFNMMGERDVVSW 9
           ++  YA+CG +S + + F+ M ER++V+W
Sbjct: 384 LIHMYARCGYVSEAIQVFDSMPERNLVTW 412



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266 EVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVKGNWSN-LILDSAIV 90
           E   +F +++  G  PN  T   +L  C     ++FGKQIH  +VK  + + + + +++V
Sbjct: 124 EAFGMFTQMLNGGFLPNGFTASGILKACGEEKALKFGKQIHGAIVKKMYKDDVFVGTSLV 183

Query: 89  FFYAQCGDLSSSFRAFNMMGERDVVSWTS 3
             YA+CG++S S + FN M  R+ V+WTS
Sbjct: 184 DMYAKCGEVSDSSKVFNGMRRRNTVTWTS 212



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
 Frame = -3

Query: 269 DEVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVKG-NWSNLILDSAI 93
           +E + LF  ++   V  N+ T V +L  C     +  G+++HA ++K  + SN  L S +
Sbjct: 224 EEAICLFRLMMRRRVVSNNLTIVSMLRACGLIGALLAGREVHAQIIKNCSQSNEYLGSTL 283

Query: 92  VFFYAQCGDLSSSFRAFNMMGERDVVSWTS 3
           V+FY +CG+  ++ +    M  RDVVSWT+
Sbjct: 284 VWFYCKCGESRTASKVLQQMPFRDVVSWTA 313


>ref|XP_003556682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18520-like [Glycine max]
          Length = 773

 Score =  123 bits (309), Expect = 1e-26
 Identities = 53/90 (58%), Positives = 73/90 (81%)
 Frame = -3

Query: 272 DDEVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVKGNWSNLILDSAI 93
           DDE  +LF + V++GV  NSK FVC++NLC RR+D+E GKQIHA ++K  W NLI+D+A+
Sbjct: 320 DDEAFKLFQDCVKHGVPANSKMFVCIMNLCGRRVDLELGKQIHARILKSRWRNLIVDNAV 379

Query: 92  VFFYAQCGDLSSSFRAFNMMGERDVVSWTS 3
           V FYA+CG++SS+FRAF+ M ERDV+ WT+
Sbjct: 380 VHFYAKCGNISSAFRAFDCMAERDVICWTT 409



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = -3

Query: 272 DDEVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVKGNWS-NLILDSA 96
           + E LE   E++E GV PNS T+   L  C        GK IH+   K   S N+ ++SA
Sbjct: 622 EHEALEFLQEMMEEGVLPNSYTYSSALKACAELEAPIQGKLIHSYASKTPASSNVFVNSA 681

Query: 95  IVFFYAQCGDLSSSFRAFNMMGERDVVSWTS 3
           +++ Y++CG ++ +F+ F+ M ER+VVSW S
Sbjct: 682 LIYMYSKCGYVADAFQVFDNMPERNVVSWES 712



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
 Frame = -3

Query: 269 DEVLELFIELVENGVEPNSKTFVCVLNLCTRRLDIEFGKQIHACVVKGN-WSNLILDSAI 93
           +E    F  +    +  N  T + VL  C     + FG+++HA ++K N  +N+ + S +
Sbjct: 522 EEATSFFRLMKMKRIHVNKLTVLSVLMACGTIKSLLFGREVHAQIIKSNIHTNIYVGSTL 581

Query: 92  VFFYAQCGDLSSSFRAFNMMGERDVVSWTS 3
           V+FY +C + S +F+    M  RDVVSWT+
Sbjct: 582 VWFYCKCKEYSYAFKVLQYMPFRDVVSWTA 611