BLASTX nr result

ID: Coptis21_contig00026266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026266
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera]   118   4e-25
emb|CAN65966.1| hypothetical protein VITISV_005935 [Vitis vinifera]   113   2e-23
emb|CAN80285.1| hypothetical protein VITISV_026753 [Vitis vinifera]   108   4e-22
emb|CAN62803.1| hypothetical protein VITISV_011794 [Vitis vinifera]   106   2e-21
emb|CAN73383.1| hypothetical protein VITISV_003164 [Vitis vinifera]   102   3e-20

>emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera]
          Length = 1625

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/105 (55%), Positives = 72/105 (68%)
 Frame = -1

Query: 319 SATIGNAFSATNSTRDHGWILDSGATNHMTFDASILRDHCLPKCFSIANANGVSYPVIGA 140
           S T    F  +    D  WILDSGAT+HMTFD+    +   P+   +ANANGV+YPV GA
Sbjct: 338 SGTSSKXFHISTHKDDEDWILDSGATDHMTFDSKDFSNTTQPRRSCVANANGVTYPVTGA 397

Query: 139 GRVDLTPSLSLEHTLLIPALSNNLLSAPQVTSQLNCLVLIYPNFC 5
           G V L+PSLSL +TLL+P+LSN L+S  QVTS LNC+VL+Y  FC
Sbjct: 398 GTVTLSPSLSLSNTLLVPSLSNRLMSVSQVTSDLNCVVLMYSTFC 442


>emb|CAN65966.1| hypothetical protein VITISV_005935 [Vitis vinifera]
          Length = 1154

 Score =  113 bits (282), Expect = 2e-23
 Identities = 59/122 (48%), Positives = 70/122 (57%)
 Frame = -1

Query: 370 PMAPSHSVVDSTLLQLQSATIGNAFSATNSTRDHGWILDSGATNHMTFDASILRDHCLPK 191
           P   S       + Q  S   G  FS   +    GWI+DSGA +HMTFD         PK
Sbjct: 261 PQQESSISTSEQIAQNDSGNQGYVFSCLKTGNHDGWIIDSGAIDHMTFDLCDFSKATQPK 320

Query: 190 CFSIANANGVSYPVIGAGRVDLTPSLSLEHTLLIPALSNNLLSAPQVTSQLNCLVLIYPN 11
              I NANGV+Y V G G V L+PS SL +TLL+P+LSN LLS  QVT +LNC  L+YPN
Sbjct: 321 RICITNANGVTYLVTGVGTVALSPSFSLPNTLLVPSLSNKLLSIGQVTEELNCCALMYPN 380

Query: 10  FC 5
           FC
Sbjct: 381 FC 382


>emb|CAN80285.1| hypothetical protein VITISV_026753 [Vitis vinifera]
          Length = 1387

 Score =  108 bits (270), Expect = 4e-22
 Identities = 59/117 (50%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
 Frame = -1

Query: 352 SVVDSTLLQLQSATIGNAFSATNSTRDH-GWILDSGATNHMTFDASILRDHCLPKCFSIA 176
           S++ +T + L +   G +F  TN T  + GWILDSGAT+HMT+DAS   +   P+  SIA
Sbjct: 355 SLIPTTTVDLDT---GMSFLGTNITESYDGWILDSGATDHMTYDASDFSERSSPRRTSIA 411

Query: 175 NANGVSYPVIGAGRVDLTPSLSLEHTLLIPALSNNLLSAPQVTSQLNCLVLIYPNFC 5
           NANG    V  AG V ++P+LSL +TL +P+LS+ LL   QVT +LNC+VLIYP FC
Sbjct: 412 NANGDISLVKWAGTVMISPALSLTNTLFVPSLSHKLLLVSQVTKELNCIVLIYPTFC 468


>emb|CAN62803.1| hypothetical protein VITISV_011794 [Vitis vinifera]
          Length = 293

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/120 (43%), Positives = 72/120 (60%)
 Frame = -1

Query: 361 PSHSVVDSTLLQLQSATIGNAFSATNSTRDHGWILDSGATNHMTFDASILRDHCLPKCFS 182
           PS S++          T G A   +    D  WIL+S AT+HMTFD++   +   P+   
Sbjct: 173 PSLSLIPQVESPHDPGTSGKALHISTHNNDDDWILNSSATDHMTFDSNDFSNATQPRRSY 232

Query: 181 IANANGVSYPVIGAGRVDLTPSLSLEHTLLIPALSNNLLSAPQVTSQLNCLVLIYPNFCF 2
           + NANGV+Y + GAG V L+PS SL  TLL+P+LSN L+   QVT  LNC++++Y  FCF
Sbjct: 233 VTNANGVTYXITGAGTVTLSPSFSLSKTLLVPSLSNRLMYVSQVTVDLNCVIVMYSTFCF 292


>emb|CAN73383.1| hypothetical protein VITISV_003164 [Vitis vinifera]
          Length = 960

 Score =  102 bits (254), Expect = 3e-20
 Identities = 53/119 (44%), Positives = 71/119 (59%)
 Frame = -1

Query: 361 PSHSVVDSTLLQLQSATIGNAFSATNSTRDHGWILDSGATNHMTFDASILRDHCLPKCFS 182
           PS S++          T G     +    D  WILDSGAT++MTFD++   +   P+   
Sbjct: 240 PSLSLIPQVESPHDXGTSGKTXXISTHNDDDDWILDSGATBYMTFDSNDFSNATQPRRSC 299

Query: 181 IANANGVSYPVIGAGRVDLTPSLSLEHTLLIPALSNNLLSAPQVTSQLNCLVLIYPNFC 5
           + NANGV+Y VIGAG V L  S SL +TLL+ +LSN L S  QVT+ LNC+V++Y  FC
Sbjct: 300 VTNANGVTYSVIGAGTVTLYLSFSLSNTLLVSSLSNRLTSVSQVTADLNCVVVMYSTFC 358


Top