BLASTX nr result

ID: Coptis21_contig00026264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026264
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632814.1| PREDICTED: uncharacterized protein LOC100854...   120   2e-25
ref|XP_002326434.1| predicted protein [Populus trichocarpa] gi|1...   115   8e-24
ref|XP_002533815.1| conserved hypothetical protein [Ricinus comm...   113   2e-23
ref|XP_002303335.1| predicted protein [Populus trichocarpa] gi|2...   104   1e-20
ref|XP_003528741.1| PREDICTED: uncharacterized protein LOC100778...    95   9e-18

>ref|XP_003632814.1| PREDICTED: uncharacterized protein LOC100854504 [Vitis vinifera]
           gi|297742923|emb|CBI35790.3| unnamed protein product
           [Vitis vinifera]
          Length = 162

 Score =  120 bits (300), Expect = 2e-25
 Identities = 64/118 (54%), Positives = 79/118 (66%)
 Frame = -2

Query: 569 HQKEAQTKMSDEDKKSKRWWKRSLFSWWKVDKKSKPPRQYANSSVRASNLRPGSFSGPIY 390
           H  EA      E+K+SK+ WK +LFSWWK DKK+KP  +    S R S+ R G  SGPIY
Sbjct: 48  HGDEAGKGRLSEEKRSKKSWKSTLFSWWKADKKNKPSVEQVPCS-RISDPRRGHVSGPIY 106

Query: 389 GSGRKAGPRQQVRRHTSGPITSLFTPARGEGINLPYVSLDQLNHPIVSQAYGPVYLVT 216
           GSGR+   +Q  RR TSGP+TSLF P R    ++PYVSL+QL+    +QAYGPVYLVT
Sbjct: 107 GSGRRTDSKQ--RRPTSGPLTSLFNPTRKAETDIPYVSLNQLSSSHSAQAYGPVYLVT 162


>ref|XP_002326434.1| predicted protein [Populus trichocarpa] gi|118483226|gb|ABK93516.1|
           unknown [Populus trichocarpa]
           gi|222833756|gb|EEE72233.1| predicted protein [Populus
           trichocarpa]
          Length = 161

 Score =  115 bits (287), Expect = 8e-24
 Identities = 62/124 (50%), Positives = 77/124 (62%)
 Frame = -2

Query: 587 NQASPFHQKEAQTKMSDEDKKSKRWWKRSLFSWWKVDKKSKPPRQYANSSVRASNLRPGS 408
           N  SP    E+     +E+KKS+R WKR+L  WWK +KK+KP  +  NSS   SN R G 
Sbjct: 41  NLQSPLQHPESGKGRVEEEKKSRRSWKRTLLKWWKAEKKTKPTVEPTNSS-HISNPRKGH 99

Query: 407 FSGPIYGSGRKAGPRQQVRRHTSGPITSLFTPARGEGINLPYVSLDQLNHPIVSQAYGPV 228
            SGPIYGS R    R   RR TSGP+T+LF  ++      PY+ LDQLN+P   +AYGPV
Sbjct: 100 VSGPIYGSARGVDARH--RRQTSGPLTNLFNHSKRVENETPYMCLDQLNNPHGVKAYGPV 157

Query: 227 YLVT 216
           YLVT
Sbjct: 158 YLVT 161


>ref|XP_002533815.1| conserved hypothetical protein [Ricinus communis]
           gi|223526252|gb|EEF28568.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 165

 Score =  113 bits (283), Expect = 2e-23
 Identities = 59/123 (47%), Positives = 75/123 (60%)
 Frame = -2

Query: 584 QASPFHQKEAQTKMSDEDKKSKRWWKRSLFSWWKVDKKSKPPRQYANSSVRASNLRPGSF 405
           Q +   Q E   K + E+KKSK+ W+ SLF WWK D K     +   +S R SN R G  
Sbjct: 44  QTASAQQPEEAGKRTGEEKKSKKSWRTSLFKWWKADNKKSEASKEPENSSRISNPRKGHV 103

Query: 404 SGPIYGSGRKAGPRQQVRRHTSGPITSLFTPARGEGINLPYVSLDQLNHPIVSQAYGPVY 225
           SGPIYGSG  A    + RR TSGP+T+LF   +  G  +PY+ LDQL+ P  ++AYGPVY
Sbjct: 104 SGPIYGSGGLA-VESKHRRQTSGPLTNLFNSTKRTGNEIPYMCLDQLSSPHGAKAYGPVY 162

Query: 224 LVT 216
           LVT
Sbjct: 163 LVT 165


>ref|XP_002303335.1| predicted protein [Populus trichocarpa] gi|222840767|gb|EEE78314.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  104 bits (260), Expect = 1e-20
 Identities = 59/124 (47%), Positives = 75/124 (60%)
 Frame = -2

Query: 587 NQASPFHQKEAQTKMSDEDKKSKRWWKRSLFSWWKVDKKSKPPRQYANSSVRASNLRPGS 408
           N  S     E+  +  + +KK++R WK SL  WW  +KK+KP  +  NSS   SN R G 
Sbjct: 41  NLQSILPHPESGKERVEVEKKNRRSWKHSLLKWWNAEKKTKPIVEATNSS-NISNPRKGH 99

Query: 407 FSGPIYGSGRKAGPRQQVRRHTSGPITSLFTPARGEGINLPYVSLDQLNHPIVSQAYGPV 228
            SGPIYGSGR  G   + RR TSGP+T+LF  ++       YV LDQLN+P   +AYGPV
Sbjct: 100 VSGPIYGSGR--GVEIRYRRQTSGPLTNLFNRSKSVENENRYVCLDQLNNPQGVKAYGPV 157

Query: 227 YLVT 216
           YLVT
Sbjct: 158 YLVT 161


>ref|XP_003528741.1| PREDICTED: uncharacterized protein LOC100778726 [Glycine max]
          Length = 165

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 52/125 (41%), Positives = 76/125 (60%), Gaps = 2/125 (1%)
 Frame = -2

Query: 584 QASPFHQKEAQTKMSDEDKKSKRWWKRSLFSWWKVDKKSK-PPRQYANSSVRASNLRPGS 408
           ++S  H +E++   S+++KK K+ WK SL SWWK DKKSK   +   NS  ++S    G 
Sbjct: 43  KSSSVHPEESRKTGSEKEKKGKKSWKSSLTSWWKTDKKSKHSEKTTTNSKSKSSGKWNGH 102

Query: 407 FSGPIYGSGRKAGPRQQVRRHTSGPITSLFTPARGEGINLPYVSLDQLNH-PIVSQAYGP 231
            SGP+Y S R +  +    R +SGP+ SLF P + E   +PY+SL Q N+ P   + YGP
Sbjct: 103 SSGPMYRSSRSSDGKHW--RPSSGPLVSLFKPTKWEENEIPYISLQQHNNSPPAEKNYGP 160

Query: 230 VYLVT 216
           +Y+VT
Sbjct: 161 LYVVT 165


Top