BLASTX nr result

ID: Coptis21_contig00026260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026260
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527410.1| RNA binding protein, putative [Ricinus commu...   246   6e-63
ref|NP_001236496.1| uncharacterized protein LOC100527214 [Glycin...   242   7e-62
ref|XP_003636379.1| hypothetical protein MTR_040s0004 [Medicago ...   236   4e-60
ref|XP_003597618.1| hypothetical protein MTR_2g100220 [Medicago ...   236   4e-60
ref|XP_004146824.1| PREDICTED: uncharacterized protein LOC101205...   233   6e-59

>ref|XP_002527410.1| RNA binding protein, putative [Ricinus communis]
           gi|223533220|gb|EEF34976.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 248

 Score =  246 bits (627), Expect = 6e-63
 Identities = 125/179 (69%), Positives = 147/179 (82%)
 Frame = +1

Query: 214 NVSKLLKLNKPATTKHEEVDDELYMGCERWLPIPPKVNNPPRSIYNAASLAYIGDCIYEL 393
           +VS LLK N       +++DD  Y+G ERW+P PPKV  P RS+YNAA+LAYIGD IYEL
Sbjct: 66  SVSNLLKRNTTPQGVMKKLDDT-YLGYERWMPTPPKVEKP-RSVYNAATLAYIGDSIYEL 123

Query: 394 YARRHFLYPPLSIEEYNDRVMAVVRCEAQDALLKKLLHQDFLSEDERDVLRWGKNIDSGK 573
           YARRHFL+PPLSIEEYNDRVM+VVRCEAQDALL KLL+ +FLS++ERDVLRWGKNI S K
Sbjct: 124 YARRHFLFPPLSIEEYNDRVMSVVRCEAQDALLHKLLNDNFLSKEERDVLRWGKNIASAK 183

Query: 574 TRTTKRAGVAVYNRASSLETLVGYLYLTNATRLEDLMVKLGFTTASNRLIMEEPQKKSK 750
           TRT KRAG AVYNRASSLETLVGYLYLT+ TRLE++M+KLGF+  S+  ++EE  K  K
Sbjct: 184 TRTKKRAGAAVYNRASSLETLVGYLYLTDVTRLEEVMLKLGFSVDSSTPVLEETDKSCK 242


>ref|NP_001236496.1| uncharacterized protein LOC100527214 [Glycine max]
           gi|255631798|gb|ACU16266.1| unknown [Glycine max]
          Length = 240

 Score =  242 bits (618), Expect = 7e-62
 Identities = 124/168 (73%), Positives = 139/168 (82%), Gaps = 2/168 (1%)
 Frame = +1

Query: 217 VSKLLKLNKPATT--KHEEVDDELYMGCERWLPIPPKVNNPPRSIYNAASLAYIGDCIYE 390
           +S LLK   P  T    EEV DE Y+G E+WLP PPKV  P RS++NAA+LAYIGDCIYE
Sbjct: 58  ISDLLKRATPLPTIGHIEEVQDETYLGYEKWLPTPPKVVKP-RSVFNAATLAYIGDCIYE 116

Query: 391 LYARRHFLYPPLSIEEYNDRVMAVVRCEAQDALLKKLLHQDFLSEDERDVLRWGKNIDSG 570
           LYARRHFL+PPLSIEEYNDRVMAVVRCEAQDALL+KLL  +FLS+ ERDVLRWGKNI S 
Sbjct: 117 LYARRHFLFPPLSIEEYNDRVMAVVRCEAQDALLQKLLESNFLSDQERDVLRWGKNIVSN 176

Query: 571 KTRTTKRAGVAVYNRASSLETLVGYLYLTNATRLEDLMVKLGFTTASN 714
           KT+T KRAG AVYNRASSLETLVGYLYLTN  RLE LM++LGF+  S+
Sbjct: 177 KTKTKKRAGAAVYNRASSLETLVGYLYLTNVNRLEKLMLELGFSVDSS 224


>ref|XP_003636379.1| hypothetical protein MTR_040s0004 [Medicago truncatula]
           gi|355502314|gb|AES83517.1| hypothetical protein
           MTR_040s0004 [Medicago truncatula]
          Length = 279

 Score =  236 bits (603), Expect = 4e-60
 Identities = 129/197 (65%), Positives = 149/197 (75%), Gaps = 4/197 (2%)
 Frame = +1

Query: 217 VSKLLKLNKPATT--KHEEVD--DELYMGCERWLPIPPKVNNPPRSIYNAASLAYIGDCI 384
           +S LLK   P  T  K EEV   DE Y+G +RWLP PPKV  P RS++NAA+LAYIGDCI
Sbjct: 70  ISDLLKRATPLPTIGKIEEVQEHDETYLGYDRWLPTPPKVVKP-RSVFNAATLAYIGDCI 128

Query: 385 YELYARRHFLYPPLSIEEYNDRVMAVVRCEAQDALLKKLLHQDFLSEDERDVLRWGKNID 564
           YELYARRHFL+PPLSIEE+NDRVMAVVRCEAQDALL+KLL  +FLS+ ERDVLRWGKNI 
Sbjct: 129 YELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDALLQKLLISNFLSDQERDVLRWGKNII 188

Query: 565 SGKTRTTKRAGVAVYNRASSLETLVGYLYLTNATRLEDLMVKLGFTTASNRLIMEEPQKK 744
           S KT+T +RAG AVYNRASSLETLVGYLYLTN  RLE LM++LGF+  S+  +       
Sbjct: 189 SSKTKTKRRAGAAVYNRASSLETLVGYLYLTNVNRLEKLMLELGFSVDSSMPL------- 241

Query: 745 SK*NVMNLIVSHVFLGL 795
              N+  LIVS +   L
Sbjct: 242 ---NLEELIVSFILSSL 255


>ref|XP_003597618.1| hypothetical protein MTR_2g100220 [Medicago truncatula]
           gi|355486666|gb|AES67869.1| hypothetical protein
           MTR_2g100220 [Medicago truncatula]
          Length = 258

 Score =  236 bits (603), Expect = 4e-60
 Identities = 129/197 (65%), Positives = 149/197 (75%), Gaps = 4/197 (2%)
 Frame = +1

Query: 217 VSKLLKLNKPATT--KHEEVD--DELYMGCERWLPIPPKVNNPPRSIYNAASLAYIGDCI 384
           +S LLK   P  T  K EEV   DE Y+G +RWLP PPKV  P RS++NAA+LAYIGDCI
Sbjct: 70  ISDLLKRATPLPTIGKIEEVQEHDETYLGYDRWLPTPPKVVKP-RSVFNAATLAYIGDCI 128

Query: 385 YELYARRHFLYPPLSIEEYNDRVMAVVRCEAQDALLKKLLHQDFLSEDERDVLRWGKNID 564
           YELYARRHFL+PPLSIEE+NDRVMAVVRCEAQDALL+KLL  +FLS+ ERDVLRWGKNI 
Sbjct: 129 YELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDALLQKLLISNFLSDQERDVLRWGKNII 188

Query: 565 SGKTRTTKRAGVAVYNRASSLETLVGYLYLTNATRLEDLMVKLGFTTASNRLIMEEPQKK 744
           S KT+T +RAG AVYNRASSLETLVGYLYLTN  RLE LM++LGF+  S+  +       
Sbjct: 189 SSKTKTKRRAGAAVYNRASSLETLVGYLYLTNVNRLEKLMLELGFSVDSSMPL------- 241

Query: 745 SK*NVMNLIVSHVFLGL 795
              N+  LIVS +   L
Sbjct: 242 ---NLEELIVSFILSSL 255


>ref|XP_004146824.1| PREDICTED: uncharacterized protein LOC101205919 [Cucumis sativus]
          Length = 245

 Score =  233 bits (593), Expect = 6e-59
 Identities = 118/178 (66%), Positives = 144/178 (80%), Gaps = 3/178 (1%)
 Frame = +1

Query: 217 VSKLLKLNKPATTKHEEVD--DELYMGCERWLPIPPKVNNPPRSIYNAASLAYIGDCIYE 390
           VS LL    P++ +  +++  D LY+G ++WLP PPKV  P RS++NAASLAYIGDCIYE
Sbjct: 63  VSDLLNRRNPSSIEGCKLEEPDGLYLGYDQWLPDPPKVQKP-RSVFNAASLAYIGDCIYE 121

Query: 391 LYARRHFLYPPLSIEEYNDRVMAVVRCEAQDALLKKLLHQDFLSEDERDVLRWGKNI-DS 567
           LYARRHFL+PPLSIEEYNDRVMAVVRCEAQD LL+KLL+ +FL+E ERD+LRWGKN+  S
Sbjct: 122 LYARRHFLFPPLSIEEYNDRVMAVVRCEAQDVLLQKLLNDNFLTEAERDILRWGKNVGSS 181

Query: 568 GKTRTTKRAGVAVYNRASSLETLVGYLYLTNATRLEDLMVKLGFTTASNRLIMEEPQK 741
            KTRT KRAG AVYNRASSLETL+GYLYL N  RL+++M KLGF+T S+  ++ E  K
Sbjct: 182 SKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQMISEESK 239


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