BLASTX nr result

ID: Coptis21_contig00026249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026249
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indi...    69   6e-11
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   2e-10
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    66   7e-10
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    66   3e-09
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]    66   3e-09

>gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indica Group]
          Length = 1546

 Score = 69.3 bits (168), Expect(2) = 6e-11
 Identities = 31/52 (59%), Positives = 40/52 (76%)
 Frame = +2

Query: 8   QCAFVPKRQITDNIILAHEIMHTLKKKQDNTGLMAIKLDMSKAFDKVNWSLL 163
           Q AFVP R ITDNI+LA+E +HT+K+K+   GL A+KLDM KA+D+V W  L
Sbjct: 310 QSAFVPGRLITDNILLAYECIHTMKRKKGRKGLCAVKLDMHKAYDRVEWGFL 361



 Score = 22.3 bits (46), Expect(2) = 6e-11
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 184 VGFDNKIIHLVTQCISS 234
           +GFD + I L+  C+SS
Sbjct: 368 LGFDQRWIKLIMACVSS 384


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 26/54 (48%), Positives = 40/54 (74%)
 Frame = +2

Query: 2   PFQCAFVPKRQITDNIILAHEIMHTLKKKQDNTGLMAIKLDMSKAFDKVNWSLL 163
           P QC+FVP RQITDN+I+  E+ H+++ KQ   G MA+K+D  KA+D++ W+ +
Sbjct: 542 PTQCSFVPNRQITDNVIIVQEMFHSMRNKQGKKGFMAVKIDFEKAYDRLRWTFI 595


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 66.2 bits (160), Expect(2) = 7e-10
 Identities = 34/53 (64%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
 Frame = +2

Query: 8   QCAFVPKRQITDNIILAHEIMHTLKK-KQDNTGLMAIKLDMSKAFDKVNWSLL 163
           Q AFVP R ITDN++LA+EI+H LK  K+   GL AIKLDMSKA+D+V WS L
Sbjct: 118 QSAFVPGRLITDNVLLAYEIVHHLKSIKKGAGGLAAIKLDMSKAYDRVEWSFL 170



 Score = 21.9 bits (45), Expect(2) = 7e-10
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +1

Query: 184 VGFDNKIIHLVTQCISS 234
           +GFD K + L+ +C+++
Sbjct: 177 MGFDEKWVQLIMKCVTT 193


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 27/55 (49%), Positives = 39/55 (70%)
 Frame = +2

Query: 2   PFQCAFVPKRQITDNIILAHEIMHTLKKKQDNTGLMAIKLDMSKAFDKVNWSLLF 166
           P Q AF+P+R I DNI++AHE+ H+ K K    G +AIKLDM KA+D++ W  ++
Sbjct: 551 PLQGAFIPERLIQDNILIAHEVFHSFKNKTGRGGWIAIKLDMEKAYDRLEWKYIY 605


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/54 (53%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
 Frame = +2

Query: 8    QCAFVPKRQITDNIILAHEIMHTLKKKQD-NTGLMAIKLDMSKAFDKVNWSLLF 166
            Q AFVP R ITD+I++AHE++H LK+K++   G  A+K+D+SKA+DK+ W+ LF
Sbjct: 1092 QSAFVPXRSITDSILIAHEVLHFLKRKREGRIGYXALKIDISKAYDKLEWNYLF 1145


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