BLASTX nr result
ID: Coptis21_contig00026239
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00026239 (526 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like... 101 6e-20 ref|XP_002883022.1| hypothetical protein ARALYDRAFT_479140 [Arab... 98 6e-19 ref|XP_002298167.1| predicted protein [Populus trichocarpa] gi|2... 95 7e-18 gb|AAC77829.1| putative zinc finger protein [Arabidopsis thaliana] 94 1e-17 ref|NP_188294.1| RING-H2 finger protein ATL2 [Arabidopsis thalia... 94 1e-17 >ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like [Vitis vinifera] Length = 244 Score = 101 bits (252), Expect = 6e-20 Identities = 57/136 (41%), Positives = 82/136 (60%), Gaps = 5/136 (3%) Frame = +3 Query: 69 VDPMIVKSLPLFIYNDENVKEPLDCAVCLSEFEERESVKMVTCCGQVFHPECIDRWLASH 248 +D V SLPLF Y+ + KE LDC VCL++FE++++VK++ C VFHP CID WL+SH Sbjct: 112 LDASTVSSLPLFSYHGD-AKETLDCPVCLTQFEDKDTVKIIPYCRHVFHPPCIDTWLSSH 170 Query: 249 ASCPLCRSTDLL----GLSTVMNKSEISSLTMNVVIEERSTVENGDTSGEGQSDELWRMR 416 SCP+CRST L G +V+ + + + ER T ++GDT E +S + R Sbjct: 171 VSCPVCRSTQLFPAKDGRCSVVQEGSDEGGSQS---HERLTADDGDTYVEVESLAVRRTT 227 Query: 417 R-TSFGDRVCLQRSLS 461 +S G+R L R+ S Sbjct: 228 SCSSLGERALLHRTSS 243 >ref|XP_002883022.1| hypothetical protein ARALYDRAFT_479140 [Arabidopsis lyrata subsp. lyrata] gi|297328862|gb|EFH59281.1| hypothetical protein ARALYDRAFT_479140 [Arabidopsis lyrata subsp. lyrata] Length = 304 Score = 98.2 bits (243), Expect = 6e-19 Identities = 45/106 (42%), Positives = 69/106 (65%), Gaps = 1/106 (0%) Frame = +3 Query: 69 VDPMIVKSLPLFIYNDENVKEPLDCAVCLSEFEERESVKMVTCCGQVFHPECIDRWLASH 248 +DP ++KSLP+F ++DE K+P++CAVCLSEFEE ES +++ C FH +CID W SH Sbjct: 95 LDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESESGRVLPNCKHTFHVDCIDMWFHSH 154 Query: 249 ASCPLCRS-TDLLGLSTVMNKSEISSLTMNVVIEERSTVENGDTSG 383 ++CPLCRS + L +M + + + + + S +E G +SG Sbjct: 155 STCPLCRSLVEPLAGIELMEATTEGEVVIAIGSDPVSAIEPGSSSG 200 >ref|XP_002298167.1| predicted protein [Populus trichocarpa] gi|222845425|gb|EEE82972.1| predicted protein [Populus trichocarpa] Length = 183 Score = 94.7 bits (234), Expect = 7e-18 Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 8/114 (7%) Frame = +3 Query: 69 VDPMIVKSLPLFIYNDENVKEPLDCAVCLSEFEERESVKMVTCCGQVFHPECIDRWLASH 248 +DP +V SLP++ Y +VK ++CA+CL EFEE+E+VKM+ C VFH +CID WL H Sbjct: 64 LDPQVVNSLPVYSYYHGDVKYQIECAICLGEFEEKEAVKMIPKCHHVFHLQCIDTWLEMH 123 Query: 249 ASCPLCRSTDLL--------GLSTVMNKSEISSLTMNVVIEERSTVENGDTSGE 386 +CP+CR + GL + + + + E RS V NGDTS E Sbjct: 124 VTCPVCRGAQFVQEKGGGNDGLGVIQERVDQGASQP----EARSEVGNGDTSLE 173 >gb|AAC77829.1| putative zinc finger protein [Arabidopsis thaliana] Length = 304 Score = 94.0 bits (232), Expect = 1e-17 Identities = 42/111 (37%), Positives = 70/111 (63%) Frame = +3 Query: 69 VDPMIVKSLPLFIYNDENVKEPLDCAVCLSEFEERESVKMVTCCGQVFHPECIDRWLASH 248 +DP ++KSLP+F ++DE K+P++CAVCLSEFEE E+ +++ C FH +CID W SH Sbjct: 95 LDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSH 154 Query: 249 ASCPLCRSTDLLGLSTVMNKSEISSLTMNVVIEERSTVENGDTSGEGQSDE 401 ++CPLCRS + L+ + + + + + ++ + +S G +DE Sbjct: 155 STCPLCRSL-VESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSGLTDE 204 >ref|NP_188294.1| RING-H2 finger protein ATL2 [Arabidopsis thaliana] gi|68565202|sp|Q8L9T5.2|ATL2_ARATH RecName: Full=RING-H2 finger protein ATL2; AltName: Full=Protein ARABIDOPSIS TOXICOS EN LEVADURA 2; Short=Protein ATL2 gi|11994627|dbj|BAB02764.1| RING zinc finger protein-like [Arabidopsis thaliana] gi|17065578|gb|AAL32943.1| RING zinc finger protein-like [Arabidopsis thaliana] gi|20148585|gb|AAM10183.1| RING zinc finger protein-like [Arabidopsis thaliana] gi|70905095|gb|AAZ14073.1| At3g16720 [Arabidopsis thaliana] gi|332642336|gb|AEE75857.1| RING-H2 finger protein ATL2 [Arabidopsis thaliana] Length = 304 Score = 94.0 bits (232), Expect = 1e-17 Identities = 42/111 (37%), Positives = 70/111 (63%) Frame = +3 Query: 69 VDPMIVKSLPLFIYNDENVKEPLDCAVCLSEFEERESVKMVTCCGQVFHPECIDRWLASH 248 +DP ++KSLP+F ++DE K+P++CAVCLSEFEE E+ +++ C FH +CID W SH Sbjct: 95 LDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSH 154 Query: 249 ASCPLCRSTDLLGLSTVMNKSEISSLTMNVVIEERSTVENGDTSGEGQSDE 401 ++CPLCRS + L+ + + + + + ++ + +S G +DE Sbjct: 155 STCPLCRSL-VESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSGLTDE 204