BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026224
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like...   141   3e-31
ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thali...   119   1e-24
ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp....   117   4e-24
ref|XP_002523741.1| zinc finger protein, putative [Ricinus commu...   106   9e-21
gb|AAC77829.1| putative zinc finger protein [Arabidopsis thaliana]     98   2e-18

>ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like [Vitis vinifera]
          Length = 244

 Score =  141 bits (355), Expect = 3e-31
 Identities = 86/175 (49%), Positives = 109/175 (62%), Gaps = 17/175 (9%)
 Frame = +1

Query: 196 YSFYIRRFSTADPLVISRLR-------TQLVRS-TSSHGLDMSTVQSLPIFAYDGNAKEA 351
           +S YIRRF+  + + +SR R       +   RS T S GLD STV SLP+F+Y G+AKE 
Sbjct: 73  FSVYIRRFAEDNAVEMSRRRRHPNPPASSSSRSPTPSKGLDASTVSSLPLFSYHGDAKET 132

Query: 352 VYCSVCLSEFEEKETVKLIPNCGHVYHSECIDKWFVSHVSCPLCRSIELF-KKD--TVVV 522
           + C VCL++FE+K+TVK+IP C HV+H  CID W  SHVSCP+CRS +LF  KD    VV
Sbjct: 133 LDCPVCLTQFEDKDTVKIIPYCRHVFHPPCIDTWLSSHVSCPVCRSTQLFPAKDGRCSVV 192

Query: 523 LE------CELLEQSTVSSRDTVVERENEEKASVRRNSSCSSLNERILLQRSLSF 669
            E       +  E+ T    DT VE    E  +VRR +SCSSL ER LL R+ SF
Sbjct: 193 QEGSDEGGSQSHERLTADDGDTYVE---VESLAVRRTTSCSSLGERALLHRTSSF 244


>ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thaliana]
           gi|68565332|sp|Q9SJJ7.1|ATL57_ARATH RecName:
           Full=RING-H2 finger protein ATL57
           gi|4510422|gb|AAD21508.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|26452105|dbj|BAC43142.1| putative RING finger protein
           [Arabidopsis thaliana] gi|28950793|gb|AAO63320.1|
           At2g27940 [Arabidopsis thaliana]
           gi|330252968|gb|AEC08062.1| RING-H2 finger protein ATL57
           [Arabidopsis thaliana]
          Length = 237

 Score =  119 bits (297), Expect = 1e-24
 Identities = 80/222 (36%), Positives = 112/222 (50%), Gaps = 19/222 (8%)
 Frame = +1

Query: 58  NAPLTTQSLPPSQPPNAKQPFISFTSFDCXXXXXXXXXXXXXXXSLYSFYIRRFSTADPL 237
           ++PLT    PP QPP+A    ++ T F                   +S Y R F+ +   
Sbjct: 31  SSPLTPT--PPPQPPSALDSTMALTIF--------ILLVALFFMGFFSVYFRHFADSSSS 80

Query: 238 VIS---------------RLRTQLVRS---TSSHGLDMSTVQSLPIFAYDGNAKEAVY-C 360
            +                RL T +V S   +   GLD   V+SLP++ Y   AK+    C
Sbjct: 81  TVDISSMPRTRSSRMSPRRLSTSVVVSRPYSFRRGLDSQAVRSLPVYRYTKAAKQRNEDC 140

Query: 361 SVCLSEFEEKETVKLIPNCGHVYHSECIDKWFVSHVSCPLCRSIELFKKDTVVVLECELL 540
            +CLS+FEE ETVK+IP+CGHV+H +C+D W  S+V+CPLCRS +LF    + + E    
Sbjct: 141 VICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKDLGMQEPP-- 198

Query: 541 EQSTVSSRDTVVERENEEKASVRRNSSCSSLNERILLQRSLS 666
           +Q +    DT     +     VRR SSCSSL +R  L+RSLS
Sbjct: 199 DQDSAEEHDTC----DGVDTCVRRCSSCSSLGQRTGLERSLS 236


>ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326798|gb|EFH57218.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 234

 Score =  117 bits (293), Expect = 4e-24
 Identities = 81/226 (35%), Positives = 114/226 (50%), Gaps = 17/226 (7%)
 Frame = +1

Query: 40  RKLLSKNAPLTTQSLPPSQPPNAKQPFISFTSFDCXXXXXXXXXXXXXXXSLYSFYIRRF 219
           ++L++     T+   PP +PP+A    ++ T F                   +S YI  F
Sbjct: 22  QELVTNVQNATSLPPPPPEPPSALDSSMALTIF--------VLLVALFFMGFFSVYIHHF 73

Query: 220 STADPLVIS-------------RLRTQLVRS---TSSHGLDMSTVQSLPIFAYDGNAKEA 351
                + IS             RL T +V S   +   GLD  TV+SLP++ Y    K+ 
Sbjct: 74  VDDSTVEISSIPRTRSSRMSPRRLSTSVVVSRPYSYRRGLDSQTVRSLPVYHYTKATKQR 133

Query: 352 VY-CSVCLSEFEEKETVKLIPNCGHVYHSECIDKWFVSHVSCPLCRSIELFKKDTVVVLE 528
              C +CLSEFEE ETVK+IP+CGHV+H +C+D W  S+V+CPLCRS +LF    + + E
Sbjct: 134 NEDCVICLSEFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKDLGMQE 193

Query: 529 CELLEQSTVSSRDTVVERENEEKASVRRNSSCSSLNERILLQRSLS 666
               +Q +    DT     +     VRR SSCSSL +R  L+RSLS
Sbjct: 194 PP--DQGSSEEHDTC----DVVDPCVRRCSSCSSLGQRTGLERSLS 233


>ref|XP_002523741.1| zinc finger protein, putative [Ricinus communis]
           gi|223537045|gb|EEF38681.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 254

 Score =  106 bits (264), Expect = 9e-21
 Identities = 80/237 (33%), Positives = 102/237 (43%), Gaps = 37/237 (15%)
 Frame = +1

Query: 67  LTTQSLPPSQ----PPNAKQPFISFTSFDCXXXXXXXXXXXXXXXSLYSFYIRRFSTAD- 231
           L   S PP Q    PP    PF S  +                    +S YIRRFST   
Sbjct: 25  LHNMSSPPPQSVLKPPYPNPPFDSSMALTVLVLLSALFFM-----GFFSIYIRRFSTEPA 79

Query: 232 ---------PLVISRLRTQLVRSTSSHGLDMSTVQSLPIFAY-DGNAKEAVYCSVCLSEF 381
                    P   S  R   V   S  GLD   ++SLP+++Y  G AK  + C+VCL EF
Sbjct: 80  SEFTSHHPGPGTPSNQRPSRVVGGSRKGLDPEVIKSLPVYSYYHGEAKYQIECAVCLGEF 139

Query: 382 EEKETVKLIPNCGHVYHSECIDKWFVSHVSCPLCRSIELFK--------------KDTVV 519
           EEKETVK IP C H++H ECI+ W   HV+CP+CR  +  +               D VV
Sbjct: 140 EEKETVKSIPYCKHMFHLECIETWLKLHVTCPVCRGTQFLEVKSRDGDGGDGGGGSDKVV 199

Query: 520 VLEC--------ELLEQSTVSSRDTVVERENEEKASVRRNSSCSSLNERILLQRSLS 666
            +          +   +S V   DT +E          R  +CSSL ERILL  + S
Sbjct: 200 RIRVDDGGNSSQQDQGRSMVGDADTGIELGT---LGTGRTGNCSSLGERILLSETSS 253


>gb|AAC77829.1| putative zinc finger protein [Arabidopsis thaliana]
          Length = 304

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
 Frame = +1

Query: 217 FSTADPLVISRLRTQLVRSTSSHGLDMSTVQSLPIFAY-DGNAKEAVYCSVCLSEFEEKE 393
           F TADP       T      +S GLD + ++SLP+F + D   K+ + C+VCLSEFEE E
Sbjct: 77  FFTADPF------TAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESE 130

Query: 394 TVKLIPNCGHVYHSECIDKWFVSHVSCPLCRSI 492
           T +++PNC H +H +CID WF SH +CPLCRS+
Sbjct: 131 TGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSL 163