BLASTX nr result

ID: Coptis21_contig00026223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026223
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513312.1| Mitochondrial deoxynucleotide carrier, putat...   332   8e-89
ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|2...   327   2e-87
gb|ABK96044.1| unknown [Populus trichocarpa]                          327   2e-87
ref|XP_003531779.1| PREDICTED: protein brittle-1, chloroplastic/...   321   2e-85
ref|XP_003632922.1| PREDICTED: protein brittle-1, chloroplastic/...   320   3e-85

>ref|XP_002513312.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis]
           gi|223547220|gb|EEF48715.1| Mitochondrial
           deoxynucleotide carrier, putative [Ricinus communis]
          Length = 375

 Score =  332 bits (851), Expect = 8e-89
 Identities = 162/216 (75%), Positives = 183/216 (84%)
 Frame = -2

Query: 990 TSAKEKCKQNGGSKLQIGHVSLDVSLSWISPXXXXXXXXXXVSTLVCHPLEVLKDRLTIS 811
           T A+EK  + G  ++QIG VSL+ SLSW+SP          VSTLVCHPLEVLKDRLTIS
Sbjct: 160 TLAQEKWNETGCPRVQIGPVSLNFSLSWVSPVAVAGAAAGIVSTLVCHPLEVLKDRLTIS 219

Query: 810 REAYPTISLALKKMYRDGGIGGMYAGLCPTLIGMLPYSTCYYFMYETVKNSYCQAKKKKK 631
            + YP++S+A+ K+Y DGGIG  YAG+ PTLIGMLPYSTCYYFMYET+K SYC+ KKKK 
Sbjct: 220 PDTYPSLSIAISKIYSDGGIGAFYAGISPTLIGMLPYSTCYYFMYETMKKSYCETKKKKS 279

Query: 630 LNRAEMLVLGALSGLTASTISFPLEVARKRLMVGALQGKCPANMAAALSEVIREEGLRGL 451
           LNR EML++GAL+G TASTISFPLEVARKRLMVGALQGKCP +MAAALSEVIREEGL GL
Sbjct: 280 LNRPEMLLVGALAGFTASTISFPLEVARKRLMVGALQGKCPPHMAAALSEVIREEGLLGL 339

Query: 450 YRGWGASCLKVMPSSGITWMFYEAWKDILVIEKNLL 343
           YRGWGASCLKVMPSSGITWMFYEAWKDIL++EK LL
Sbjct: 340 YRGWGASCLKVMPSSGITWMFYEAWKDILLVEKRLL 375


>ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|222851714|gb|EEE89261.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  327 bits (839), Expect = 2e-87
 Identities = 157/216 (72%), Positives = 180/216 (83%)
 Frame = -2

Query: 990 TSAKEKCKQNGGSKLQIGHVSLDVSLSWISPXXXXXXXXXXVSTLVCHPLEVLKDRLTIS 811
           TSA+EK  Q+   ++Q+G +SL  SLSWISP           STL CHPLEVLKDRLT+S
Sbjct: 127 TSAQEKWSQSECPRVQLGPLSLSFSLSWISPVAVGGAAAGIFSTLACHPLEVLKDRLTVS 186

Query: 810 REAYPTISLALKKMYRDGGIGGMYAGLCPTLIGMLPYSTCYYFMYETVKNSYCQAKKKKK 631
           R+ YPT+S+A+ K+Y+DGGIG  YAG+ PTLIGMLPYSTCYYFMY+T+K SYC+ K KK 
Sbjct: 187 RDIYPTLSIAISKIYKDGGIGAFYAGISPTLIGMLPYSTCYYFMYDTMKTSYCKGKNKKS 246

Query: 630 LNRAEMLVLGALSGLTASTISFPLEVARKRLMVGALQGKCPANMAAALSEVIREEGLRGL 451
           LNR EML++GA SG TAST+SFPLEVARKRLMVGALQGKCP +MAAALSEVIRE GL GL
Sbjct: 247 LNRPEMLLIGAFSGFTASTLSFPLEVARKRLMVGALQGKCPPHMAAALSEVIREGGLMGL 306

Query: 450 YRGWGASCLKVMPSSGITWMFYEAWKDILVIEKNLL 343
           YRGWGASCLKVMPSSGITWMFYEAWKDIL++EK LL
Sbjct: 307 YRGWGASCLKVMPSSGITWMFYEAWKDILLVEKRLL 342


>gb|ABK96044.1| unknown [Populus trichocarpa]
          Length = 365

 Score =  327 bits (839), Expect = 2e-87
 Identities = 157/216 (72%), Positives = 180/216 (83%)
 Frame = -2

Query: 990 TSAKEKCKQNGGSKLQIGHVSLDVSLSWISPXXXXXXXXXXVSTLVCHPLEVLKDRLTIS 811
           TSA+EK  Q+   ++Q+G +SL  SLSWISP           STL CHPLEVLKDRLT+S
Sbjct: 150 TSAQEKWSQSECPRVQLGPLSLSFSLSWISPVAVGGAAAGIFSTLACHPLEVLKDRLTVS 209

Query: 810 REAYPTISLALKKMYRDGGIGGMYAGLCPTLIGMLPYSTCYYFMYETVKNSYCQAKKKKK 631
           R+ YPT+S+A+ K+Y+DGGIG  YAG+ PTLIGMLPYSTCYYFMY+T+K SYC+ K KK 
Sbjct: 210 RDIYPTLSIAISKIYKDGGIGAFYAGISPTLIGMLPYSTCYYFMYDTMKTSYCKGKNKKS 269

Query: 630 LNRAEMLVLGALSGLTASTISFPLEVARKRLMVGALQGKCPANMAAALSEVIREEGLRGL 451
           LNR EML++GA SG TAST+SFPLEVARKRLMVGALQGKCP +MAAALSEVIRE GL GL
Sbjct: 270 LNRPEMLLIGAFSGFTASTLSFPLEVARKRLMVGALQGKCPPHMAAALSEVIREGGLMGL 329

Query: 450 YRGWGASCLKVMPSSGITWMFYEAWKDILVIEKNLL 343
           YRGWGASCLKVMPSSGITWMFYEAWKDIL++EK LL
Sbjct: 330 YRGWGASCLKVMPSSGITWMFYEAWKDILLVEKRLL 365


>ref|XP_003531779.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic-like
           [Glycine max]
          Length = 380

 Score =  321 bits (822), Expect = 2e-85
 Identities = 150/212 (70%), Positives = 178/212 (83%)
 Frame = -2

Query: 990 TSAKEKCKQNGGSKLQIGHVSLDVSLSWISPXXXXXXXXXXVSTLVCHPLEVLKDRLTIS 811
           TS  EK + N   KLQIG ++ ++SLSWISP           STLVCHPLEVLKDRLT+S
Sbjct: 164 TSLHEKWESNEYPKLQIGPINFNLSLSWISPVAIAGAAAGIASTLVCHPLEVLKDRLTVS 223

Query: 810 REAYPTISLALKKMYRDGGIGGMYAGLCPTLIGMLPYSTCYYFMYETVKNSYCQAKKKKK 631
            E YP++ +A++ +Y+DGG+G  YAG+ PTL+GMLPYSTC+YFMY+T+K SYC+ K KK 
Sbjct: 224 PETYPSLGIAIRNIYKDGGVGAFYAGISPTLVGMLPYSTCFYFMYDTIKESYCRTKSKKS 283

Query: 630 LNRAEMLVLGALSGLTASTISFPLEVARKRLMVGALQGKCPANMAAALSEVIREEGLRGL 451
           L+R EML++GAL+G TASTISFPLEVARKRLMVGALQGKCP NMAAALSEVIREEGL+GL
Sbjct: 284 LSRPEMLLIGALAGFTASTISFPLEVARKRLMVGALQGKCPPNMAAALSEVIREEGLKGL 343

Query: 450 YRGWGASCLKVMPSSGITWMFYEAWKDILVIE 355
           YRGWGASCLKVMPSSGITWMFYEAWKDIL+++
Sbjct: 344 YRGWGASCLKVMPSSGITWMFYEAWKDILLVQ 375


>ref|XP_003632922.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic isoform 2
           [Vitis vinifera]
          Length = 335

 Score =  320 bits (820), Expect = 3e-85
 Identities = 158/216 (73%), Positives = 179/216 (82%)
 Frame = -2

Query: 990 TSAKEKCKQNGGSKLQIGHVSLDVSLSWISPXXXXXXXXXXVSTLVCHPLEVLKDRLTIS 811
           T A+EK  +    KLQIG VSL++S+SWISP          VSTL CHPLEVLKDRLT+S
Sbjct: 120 TEAQEKWSKKECPKLQIGPVSLNLSISWISPIAVAGAAAGIVSTLACHPLEVLKDRLTVS 179

Query: 810 REAYPTISLALKKMYRDGGIGGMYAGLCPTLIGMLPYSTCYYFMYETVKNSYCQAKKKKK 631
            + YP+IS+AL K++ DGGIG  YAG+ PTLIGMLPYSTCYYFMYET+K SYC AKKK  
Sbjct: 180 PDIYPSISVALSKIHNDGGIGAFYAGISPTLIGMLPYSTCYYFMYETMKKSYCTAKKKTS 239

Query: 630 LNRAEMLVLGALSGLTASTISFPLEVARKRLMVGALQGKCPANMAAALSEVIREEGLRGL 451
           L+R EML++GALSG TASTISFPLEVARKRLMVGALQGKCP +MAAALSEVIRE+G+ GL
Sbjct: 240 LSRPEMLLIGALSGFTASTISFPLEVARKRLMVGALQGKCPPHMAAALSEVIREQGIMGL 299

Query: 450 YRGWGASCLKVMPSSGITWMFYEAWKDILVIEKNLL 343
           YRGWGASCLKVMPSSGITWMFYEAWKDIL+ E+  L
Sbjct: 300 YRGWGASCLKVMPSSGITWMFYEAWKDILLAERRHL 335


Top