BLASTX nr result
ID: Coptis21_contig00026201
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00026201 (1145 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containi... 376 e-102 ref|XP_002525536.1| pentatricopeptide repeat-containing protein,... 308 2e-81 ref|NP_001167893.1| uncharacterized protein LOC100381604 [Zea ma... 301 2e-79 ref|XP_002325952.1| predicted protein [Populus trichocarpa] gi|2... 300 3e-79 ref|XP_004141361.1| PREDICTED: pentatricopeptide repeat-containi... 295 1e-77 >ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420, mitochondrial-like [Vitis vinifera] Length = 582 Score = 376 bits (965), Expect = e-102 Identities = 183/361 (50%), Positives = 256/361 (70%) Frame = -1 Query: 1085 VQETVLLVKKDENGMEFELDRMGLVLNIGLVSDVFKGLNTEGVSGLRFFNWVREKQVSFY 906 + E + +++ DE ME +L+ M L L++ V+++F+ LN E +S +RFF W+ + Sbjct: 206 ISEIIKVIRSDEIDMEVKLNLMNLRLSVASVTEIFRVLNLERLSAMRFFEWISHSRSGLS 265 Query: 905 RNSDFCSLIIDNIGRMEDYDLMFLLLREFSEEKLCLTEKAFAFIPVCSSNYDLSRGYVIR 726 RN D CSLIIDN GR+ DY+ M LL++F+ +++CLT KAF F+PV + + +V + Sbjct: 266 RNYDICSLIIDNCGRLGDYETMRCLLKDFNSKRVCLTSKAFGFVPVFTLSKASIMDFVRK 325 Query: 725 IIEMLNKVGGSCRNSGIFGLIKMLCSLNAFDLGMFVMEETARRTSYYNVLIWAKCRSCSF 546 +IE+L+ VGG CR SG+FGLI+M +F++ FVME T R+TSYYN+L+ CR C+F Sbjct: 326 LIEVLDDVGGVCRRSGLFGLIEMFSVSGSFEMAKFVMEITERKTSYYNILVREMCRKCNF 385 Query: 545 QDAYVLFDEMRRFGCDPNANSYNYLLGSLCKNSRTVEACKLFGKMEEFGYVPDEVTFEVI 366 ++A L DEMR FGC PNA +YNYLL SLCKN+R EAC + +M+E G PD +TFE+ Sbjct: 386 KEARDLLDEMRLFGCRPNAKTYNYLLSSLCKNNRDDEACNVLEEMQEAGCPPDALTFEIF 445 Query: 365 ICHACRLGRLDFAVEFLNQMMSRGIEPRHTTHAAFIKGYFYGNRFVEAYKYVVDMCDKYK 186 I + RLG+LDFA++FL+QM+SRG+EPR TTHAAFIKGYF+ R+ EAY+YVVD YK Sbjct: 446 IYYTYRLGKLDFAIKFLDQMVSRGLEPRLTTHAAFIKGYFHSRRYEEAYEYVVDSGVTYK 505 Query: 185 SSGNVNYSLLASLLHKSRRVVEAREILVDMMEKGLKPNFPVYIKVLKDLHKSGLGYLVAD 6 N+ YSLLASL ++ ++ A++IL++M+EKGLKPNF VY +VL+ L KSG L D Sbjct: 506 WPSNMIYSLLASLHQRNGNLISAQKILIEMIEKGLKPNFSVYKRVLEHLDKSGREDLAGD 565 Query: 5 L 3 L Sbjct: 566 L 566 >ref|XP_002525536.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223535215|gb|EEF36894.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 430 Score = 308 bits (789), Expect = 2e-81 Identities = 159/355 (44%), Positives = 237/355 (66%) Frame = -1 Query: 1067 LVKKDENGMEFELDRMGLVLNIGLVSDVFKGLNTEGVSGLRFFNWVREKQVSFYRNSDFC 888 L+ ++N +E +L+ +G+ L+IG V VF+ LN E S L+FF+W+R Q NSD C Sbjct: 67 LLITEDNELETKLNSLGVRLSIGSVRWVFQVLNREKKSALQFFHWIRRWQPELEGNSDIC 126 Query: 887 SLIIDNIGRMEDYDLMFLLLREFSEEKLCLTEKAFAFIPVCSSNYDLSRGYVIRIIEMLN 708 SL+IDN G ++DY M LL FS ++L LT+KAF ++ + SS +L + ++++L Sbjct: 127 SLVIDNCGHLDDYKAMRCLLDGFSLQRLFLTKKAFEYLQLTSSKEELLKKATQNVVDILQ 186 Query: 707 KVGGSCRNSGIFGLIKMLCSLNAFDLGMFVMEETARRTSYYNVLIWAKCRSCSFQDAYVL 528 ++GG+ +G+ LI+M L +FD+ FV+E+T R+ SYYNVLI CR F+ A L Sbjct: 187 EIGGTSYGTGVPSLIEMFSDLGSFDMAKFVIEKTGRKLSYYNVLIRELCRRGDFKAARDL 246 Query: 527 FDEMRRFGCDPNANSYNYLLGSLCKNSRTVEACKLFGKMEEFGYVPDEVTFEVIICHACR 348 DE+ + GC+P+A++YNY++ SL KN + +AC++F +M++ PD +TFE+ I ++C Sbjct: 247 MDEIGKEGCNPSAHTYNYIISSLLKNGKNADACEVFQEMQDNDCPPDALTFEIFIYNSCN 306 Query: 347 LGRLDFAVEFLNQMMSRGIEPRHTTHAAFIKGYFYGNRFVEAYKYVVDMCDKYKSSGNVN 168 G+LD A EF + M++RG+EPR THAAFIKG+F ++ +AYKYVV DKY S NVN Sbjct: 307 EGKLDNAFEFFDDMVARGLEPRLLTHAAFIKGFFNSQQYEKAYKYVVGSDDKY--SSNVN 364 Query: 167 YSLLASLLHKSRRVVEAREILVDMMEKGLKPNFPVYIKVLKDLHKSGLGYLVADL 3 YSLLA+L K +V+A IL +M++KGL+P+F V++KV K L KSG L L Sbjct: 365 YSLLANLHQKQGNLVDAENILSEMIKKGLRPHFNVFMKVKKHLMKSGNEELATSL 419 >ref|NP_001167893.1| uncharacterized protein LOC100381604 [Zea mays] gi|223944699|gb|ACN26433.1| unknown [Zea mays] gi|414864420|tpg|DAA42977.1| TPA: hypothetical protein ZEAMMB73_690405 [Zea mays] Length = 430 Score = 301 bits (771), Expect = 2e-79 Identities = 165/362 (45%), Positives = 222/362 (61%), Gaps = 5/362 (1%) Frame = -1 Query: 1073 VLLVKKDENGMEFELDRM-GLVLNIGLVSDVFKGLNTEGVSGLRFFNWVREKQVSFYRNS 897 V LV G+E +LDR+ VL+ GLVS V + L GV RFF W F Sbjct: 46 VCLVVAGGGGLEADLDRLFSAVLSHGLVSSVLRALTDRGVPAERFFAWASSLGRGFSPGP 105 Query: 896 DFCSLIIDNIGRMEDYDLMFLLLREFSEEKLCLTEKAFAFI-PVCSSNYDLSRGYVIR-I 723 +L+++N GR++DY M L SE +L LT++AFAF+ P S+ S R + Sbjct: 106 RAYNLLVENAGRLDDYGAMSRALALMSERRLSLTDRAFAFLAPSSGSSRSGSVEDAARAV 165 Query: 722 IEMLNKVGGSCRNSGIFGLIKMLCSLNAFDLGMFVMEETARRTSYYNVLIWAKCRSCSFQ 543 + L+ VGG CR SG+F L+K L S+ FD + V+EETAR+ YYNVL+ AKC++ F Sbjct: 166 LRALDGVGGPCRASGVFSLVKALASIGEFDAAVLVIEETARKVRYYNVLVAAKCKAGDFV 225 Query: 542 DAYVLFDEMRRFGCDPNANSYNYLLGSLCKNSRTVEACKLFGKMEEF--GYVPDEVTFEV 369 A +FDEMRR G DP+AN++NYLLG L K R EAC L ME +P +T+E+ Sbjct: 226 GAREVFDEMRRSGSDPDANTWNYLLGCLLKKGRLAEACGLVEAMERLKRSEIPSSLTYEI 285 Query: 368 IICHACRLGRLDFAVEFLNQMMSRGIEPRHTTHAAFIKGYFYGNRFVEAYKYVVDMCDKY 189 + HAC+ G++D A++ L+QM S + PR T H+AFIKGYFY R +A KYV DM + Sbjct: 286 LTYHACKAGKMDSAMQILDQMFSENLTPRITIHSAFIKGYFYAGRIEDACKYVSDMSTRD 345 Query: 188 KSSGNVNYSLLASLLHKSRRVVEAREILVDMMEKGLKPNFPVYIKVLKDLHKSGLGYLVA 9 + S N NYSLLA LL KS R ++A +L ++MEKGL+P+ Y+KV KDLHK G G L Sbjct: 346 RHSVNRNYSLLAKLLWKSGRTIDAGRVLYELMEKGLRPDHSAYVKVAKDLHKMGKGNLAC 405 Query: 8 DL 3 +L Sbjct: 406 EL 407 >ref|XP_002325952.1| predicted protein [Populus trichocarpa] gi|222862827|gb|EEF00334.1| predicted protein [Populus trichocarpa] Length = 432 Score = 300 bits (769), Expect = 3e-79 Identities = 159/355 (44%), Positives = 226/355 (63%) Frame = -1 Query: 1067 LVKKDENGMEFELDRMGLVLNIGLVSDVFKGLNTEGVSGLRFFNWVREKQVSFYRNSDFC 888 L+K+DE +E++L + + L+I V+ VF LN+E VS LRFF W+R Q NSD C Sbjct: 68 LIKRDEYDLEYKLGSLSVKLSIASVTLVFHVLNSEKVSALRFFRWIRHWQPELRCNSDIC 127 Query: 887 SLIIDNIGRMEDYDLMFLLLREFSEEKLCLTEKAFAFIPVCSSNYDLSRGYVIRIIEMLN 708 SL+IDN GR++DYD M LL EF+E +LCLT+KAF F+ V + + R+I +L Sbjct: 128 SLVIDNCGRLDDYDAMRSLLNEFNENQLCLTKKAFEFLHVMNVTNESLVESTQRVIVLLL 187 Query: 707 KVGGSCRNSGIFGLIKMLCSLNAFDLGMFVMEETARRTSYYNVLIWAKCRSCSFQDAYVL 528 +V GSC + LI+M L +FD+ FVM++T R+ SYY + I CR C F+ + Sbjct: 188 EVRGSCYG-WVSSLIEMFSVLGSFDMVEFVMKKTERKISYYYIFIREMCRRCDFKGVRDI 246 Query: 527 FDEMRRFGCDPNANSYNYLLGSLCKNSRTVEACKLFGKMEEFGYVPDEVTFEVIICHACR 348 DEMR+ G + NA YNYL+ L KN +ACK+ +M++ PD +TFE+ I + C Sbjct: 247 QDEMRKEGFELNARIYNYLISCLLKNGEYADACKVLTEMQDKDCPPDALTFEIFIYYCCN 306 Query: 347 LGRLDFAVEFLNQMMSRGIEPRHTTHAAFIKGYFYGNRFVEAYKYVVDMCDKYKSSGNVN 168 G+ + A + +++++RG+EPR +THAAFIKG+F ++ EAYKYVVD KYK + +N Sbjct: 307 NGKTEIACHYFDEIVARGLEPRLSTHAAFIKGFFNSEQYEEAYKYVVDSDKKYKCTSCMN 366 Query: 167 YSLLASLLHKSRRVVEAREILVDMMEKGLKPNFPVYIKVLKDLHKSGLGYLVADL 3 YSLLA L K +V A+ IL +M++KGL+P F VY+KV L+KSG L DL Sbjct: 367 YSLLARLHQKRGNLVIAQNILSEMIKKGLRPYFKVYMKVFNCLNKSGRETLATDL 421 >ref|XP_004141361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like [Cucumis sativus] gi|449498723|ref|XP_004160616.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like [Cucumis sativus] Length = 494 Score = 295 bits (755), Expect = 1e-77 Identities = 149/363 (41%), Positives = 230/363 (63%) Frame = -1 Query: 1091 NSVQETVLLVKKDENGMEFELDRMGLVLNIGLVSDVFKGLNTEGVSGLRFFNWVREKQVS 912 N + + ++++++ +E +LD + L LV + + LN +S RFFNWV + Sbjct: 117 NQLSNIINIIRENQEDLESKLDSPNVRLTNVLVGQILEMLNKHKISASRFFNWVSVQSCK 176 Query: 911 FYRNSDFCSLIIDNIGRMEDYDLMFLLLREFSEEKLCLTEKAFAFIPVCSSNYDLSRGYV 732 F NSD SL+IDN GR++DY+ + +L EF + + L KAF F+ S+ + + V Sbjct: 177 FPCNSDVYSLLIDNFGRLDDYEGILPVLIEFGLKGIELNHKAFGFLLPLSNEHSMKLS-V 235 Query: 731 IRIIEMLNKVGGSCRNSGIFGLIKMLCSLNAFDLGMFVMEETARRTSYYNVLIWAKCRSC 552 ++++++LN+ GG+CR SGI LI+M CSL +F + FV+E T +R+S+Y +++ KC+ Sbjct: 236 VKLVKLLNEAGGTCRLSGIMALIEMFCSLGSFGMAKFVIEITEKRSSFYYIIVREKCKQK 295 Query: 551 SFQDAYVLFDEMRRFGCDPNANSYNYLLGSLCKNSRTVEACKLFGKMEEFGYVPDEVTFE 372 F+ A DEMR+ GC P+A NYLL SLCKN + EA L +M E P+ +TFE Sbjct: 296 DFEGARCTLDEMRQVGCIPDAGILNYLLSSLCKNDKFGEAHNLLEEMLEQNCSPNSLTFE 355 Query: 371 VIICHACRLGRLDFAVEFLNQMMSRGIEPRHTTHAAFIKGYFYGNRFVEAYKYVVDMCDK 192 +IICH C++G ++ A+ +L+ M++ G+ PR +THAAF+K YF R+ EAY+Y VD K Sbjct: 356 IIICHLCKIGNIESALGYLDMMVAGGLMPRLSTHAAFVKSYFSSQRYEEAYQYAVDSSLK 415 Query: 191 YKSSGNVNYSLLASLLHKSRRVVEAREILVDMMEKGLKPNFPVYIKVLKDLHKSGLGYLV 12 Y ++ N YSLLA+L K +V+A++IL ++M+ GLKP+F VY ++LK L G G L Sbjct: 416 YVTTQNATYSLLATLHEKRGNLVDAQKILSELMDAGLKPHFHVYTRLLKKLQVQGRGDLA 475 Query: 11 ADL 3 DL Sbjct: 476 NDL 478