BLASTX nr result

ID: Coptis21_contig00026200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026200
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270682.1| PREDICTED: electron transfer flavoprotein-ub...   235   3e-60
emb|CBI36719.3| unnamed protein product [Vitis vinifera]              235   3e-60
gb|ABB47885.1| Electron transfer flavoprotein-ubiquinone oxidore...   224   4e-57
gb|ABB47884.1| Electron transfer flavoprotein-ubiquinone oxidore...   224   4e-57
gb|EEE51267.1| hypothetical protein OsJ_32159 [Oryza sativa Japo...   224   4e-57

>ref|XP_002270682.1| PREDICTED: electron transfer flavoprotein-ubiquinone
           oxidoreductase, mitochondrial-like [Vitis vinifera]
          Length = 676

 Score =  235 bits (599), Expect = 3e-60
 Identities = 108/131 (82%), Positives = 120/131 (91%)
 Frame = -3

Query: 394 VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATYGALHENSSMETYWDNLKKSWIW 215
           VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEA +  LHE SSME YWD L+ SWIW
Sbjct: 448 VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEAAFDVLHEGSSMEKYWDGLRNSWIW 507

Query: 214 DELYKARNFRPAFDYGLIPGLALSAIEHYVLRGRSPLTLKHGKPDHEATEPASLHSPIQY 35
           +EL+KARN+RPAF+YGLIPGLALSA+EHYVL+GRSPLTLKHGKPDHEAT+ A LHSPIQY
Sbjct: 508 EELHKARNYRPAFEYGLIPGLALSALEHYVLKGRSPLTLKHGKPDHEATDVAQLHSPIQY 567

Query: 34  LKPDGLISYAV 2
            KPDG++S+ V
Sbjct: 568 PKPDGIVSFDV 578


>emb|CBI36719.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  235 bits (599), Expect = 3e-60
 Identities = 108/131 (82%), Positives = 120/131 (91%)
 Frame = -3

Query: 394 VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATYGALHENSSMETYWDNLKKSWIW 215
           VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEA +  LHE SSME YWD L+ SWIW
Sbjct: 308 VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEAAFDVLHEGSSMEKYWDGLRNSWIW 367

Query: 214 DELYKARNFRPAFDYGLIPGLALSAIEHYVLRGRSPLTLKHGKPDHEATEPASLHSPIQY 35
           +EL+KARN+RPAF+YGLIPGLALSA+EHYVL+GRSPLTLKHGKPDHEAT+ A LHSPIQY
Sbjct: 368 EELHKARNYRPAFEYGLIPGLALSALEHYVLKGRSPLTLKHGKPDHEATDVAQLHSPIQY 427

Query: 34  LKPDGLISYAV 2
            KPDG++S+ V
Sbjct: 428 PKPDGIVSFDV 438


>gb|ABB47885.1| Electron transfer flavoprotein-ubiquinone
           oxidoreductase,mitochondrial precursor, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 572

 Score =  224 bits (572), Expect = 4e-57
 Identities = 105/131 (80%), Positives = 117/131 (89%)
 Frame = -3

Query: 394 VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATYGALHENSSMETYWDNLKKSWIW 215
           VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEAT+  L E SSME YW+NLKKSWIW
Sbjct: 344 VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATFKTLVEGSSMELYWENLKKSWIW 403

Query: 214 DELYKARNFRPAFDYGLIPGLALSAIEHYVLRGRSPLTLKHGKPDHEATEPASLHSPIQY 35
           +ELY+ARN+RPAF+YG IPG+ALSA+E YV +G+SP TLKHG PDHEAT+ ASLHSPIQY
Sbjct: 404 EELYRARNYRPAFEYGFIPGIALSALERYVFKGKSPFTLKHGIPDHEATDMASLHSPIQY 463

Query: 34  LKPDGLISYAV 2
            KPDG IS+ V
Sbjct: 464 PKPDGQISFDV 474


>gb|ABB47884.1| Electron transfer flavoprotein-ubiquinone
           oxidoreductase,mitochondrial precursor, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 575

 Score =  224 bits (572), Expect = 4e-57
 Identities = 105/131 (80%), Positives = 117/131 (89%)
 Frame = -3

Query: 394 VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATYGALHENSSMETYWDNLKKSWIW 215
           VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEAT+  L E SSME YW+NLKKSWIW
Sbjct: 347 VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATFKTLVEGSSMELYWENLKKSWIW 406

Query: 214 DELYKARNFRPAFDYGLIPGLALSAIEHYVLRGRSPLTLKHGKPDHEATEPASLHSPIQY 35
           +ELY+ARN+RPAF+YG IPG+ALSA+E YV +G+SP TLKHG PDHEAT+ ASLHSPIQY
Sbjct: 407 EELYRARNYRPAFEYGFIPGIALSALERYVFKGKSPFTLKHGIPDHEATDMASLHSPIQY 466

Query: 34  LKPDGLISYAV 2
            KPDG IS+ V
Sbjct: 467 PKPDGQISFDV 477


>gb|EEE51267.1| hypothetical protein OsJ_32159 [Oryza sativa Japonica Group]
          Length = 582

 Score =  224 bits (572), Expect = 4e-57
 Identities = 105/131 (80%), Positives = 117/131 (89%)
 Frame = -3

Query: 394 VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATYGALHENSSMETYWDNLKKSWIW 215
           VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEAT+  L E SSME YW+NLKKSWIW
Sbjct: 354 VFPGGAIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATFKTLVEGSSMELYWENLKKSWIW 413

Query: 214 DELYKARNFRPAFDYGLIPGLALSAIEHYVLRGRSPLTLKHGKPDHEATEPASLHSPIQY 35
           +ELY+ARN+RPAF+YG IPG+ALSA+E YV +G+SP TLKHG PDHEAT+ ASLHSPIQY
Sbjct: 414 EELYRARNYRPAFEYGFIPGIALSALERYVFKGKSPFTLKHGIPDHEATDMASLHSPIQY 473

Query: 34  LKPDGLISYAV 2
            KPDG IS+ V
Sbjct: 474 PKPDGQISFDV 484


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