BLASTX nr result
ID: Coptis21_contig00026188
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00026188 (630 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi... 303 2e-80 ref|XP_002315764.1| predicted protein [Populus trichocarpa] gi|2... 275 6e-72 ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containi... 264 1e-68 ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [S... 258 6e-67 ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ... 255 4e-66 >ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera] Length = 727 Score = 303 bits (776), Expect = 2e-80 Identities = 146/208 (70%), Positives = 175/208 (84%) Frame = +3 Query: 3 PKDLIASTSMVMGYSKVGKIGAARSIFDELVEKDLVCWSAMISGYAESDWPLEALKLFND 182 PK+L+AST+MV GYSK+G+I ARS+F+++V+KDLVCWSAMISGYAESD P EAL LFN+ Sbjct: 286 PKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNE 345 Query: 183 MQQAGLRPDQITMLSVISACAQLGILDQAKWVHLFIDKNCFGDVLSINNALIDMYAKCGS 362 MQ G++PDQ+TMLSVI+ACA LG LDQAKW+HLF+DKN FG L INNALI+MYAKCGS Sbjct: 346 MQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGS 405 Query: 363 LENASRVFHKIPERRRNVITWTSMITGFAMHGDAGTALRLFDQMNADGIEPNSITFVSVL 542 LE A R+F K+P R+NVI+WT MI+ FAMHGDAG+ALR F QM + IEPN ITFV VL Sbjct: 406 LERARRIFDKMP--RKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVL 463 Query: 543 YACSHAGLVDKGRHIFALMTNKYNIFPK 626 YACSHAGLV++GR IF M N++NI PK Sbjct: 464 YACSHAGLVEEGRKIFYSMINEHNITPK 491 Score = 131 bits (330), Expect = 9e-29 Identities = 71/225 (31%), Positives = 122/225 (54%), Gaps = 31/225 (13%) Frame = +3 Query: 9 DLIASTSMVMGYSKVGKIGAARSIFDELVEKDLVCWSAMISGYAESDWPLEALKLFNDMQ 188 D T +V Y+ G+I AR +FD++ +D+V WS MI GY +S +AL LF +M+ Sbjct: 156 DPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMK 215 Query: 189 QAGLRPDQITMLSVISACAQLGILDQAKWVHLFIDKNCFGDVLSINNALIDMYAKCGSLE 368 + PD++ + +V+SAC + G L K +H FI +N + +AL+ MYA CGS++ Sbjct: 216 NYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMD 275 Query: 369 NASRVFHKIPER-----------------------------RRNVITWTSMITGFAMHGD 461 A +F K+ + +++++ W++MI+G+A Sbjct: 276 LALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDS 335 Query: 462 AGTALRLFDQMNADGIEPNSITFVSVLYACSHAGLVDKGR--HIF 590 AL LF++M + GI+P+ +T +SV+ AC+H G +D+ + H+F Sbjct: 336 PQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLF 380 Score = 76.3 bits (186), Expect = 4e-12 Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 2/181 (1%) Frame = +3 Query: 69 ARSIFDELVEKDLVCWSAMISGYAESDWPLEALKLFNDMQQAGLRPDQITMLSVISACAQ 248 A S+F+ + + + + + + S+ P + L ++ M+ GL D+ + ++ A ++ Sbjct: 75 ALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSR 134 Query: 249 LGILDQAKWVHLFIDKNCFGDVLSINNALIDMYAKCGSLENASRVFHKIPERRRNVITWT 428 + L + +H K F + L+ MYA CG + A +F K+ R+V+TW+ Sbjct: 135 VKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKM--FHRDVVTWS 192 Query: 429 SMITGFAMHGDAGTALRLFDQMNADGIEPNSITFVSVLYACSHAGLVDKGR--HIFALMT 602 MI G+ G AL LF++M +EP+ + +VL AC AG + G+ H F + Sbjct: 193 IMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMEN 252 Query: 603 N 605 N Sbjct: 253 N 253 Score = 72.8 bits (177), Expect = 5e-11 Identities = 37/148 (25%), Positives = 79/148 (53%), Gaps = 1/148 (0%) Frame = +3 Query: 21 STSMVMGYSKVGKIGAARSIFDELVEKDLVCWSAMISGYAESDWPLEALKLFNDMQQAGL 200 + +++ Y+K G + AR IFD++ K+++ W+ MIS +A AL+ F+ M+ + Sbjct: 393 NNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENI 452 Query: 201 RPDQITMLSVISACAQLGILDQAKWV-HLFIDKNCFGDVLSINNALIDMYAKCGSLENAS 377 P+ IT + V+ AC+ G++++ + + + I+++ ++D++ + L A Sbjct: 453 EPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREAL 512 Query: 378 RVFHKIPERRRNVITWTSMITGFAMHGD 461 + +P NVI W S++ +HG+ Sbjct: 513 ELVEAMP-LAPNVIIWGSLMAACRVHGE 539 >ref|XP_002315764.1| predicted protein [Populus trichocarpa] gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa] Length = 452 Score = 275 bits (702), Expect = 6e-72 Identities = 130/207 (62%), Positives = 167/207 (80%) Frame = +3 Query: 6 KDLIASTSMVMGYSKVGKIGAARSIFDELVEKDLVCWSAMISGYAESDWPLEALKLFNDM 185 ++L+ T+M+ GYS+VG++ AR IFD++ EKDLVCWSAMISGYAESD P EAL LF++M Sbjct: 12 RNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEM 71 Query: 186 QQAGLRPDQITMLSVISACAQLGILDQAKWVHLFIDKNCFGDVLSINNALIDMYAKCGSL 365 Q G++PDQ+T+LSVISACA+LG+LD+AKW+H+++DKN G L +NNALIDMYAKCG+L Sbjct: 72 QVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNL 131 Query: 366 ENASRVFHKIPERRRNVITWTSMITGFAMHGDAGTALRLFDQMNADGIEPNSITFVSVLY 545 A VF K+ + RNVI+WTSMI FA+HGDA AL+ F QM + I+PN +TFV VLY Sbjct: 132 GAARGVFEKM--QSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLY 189 Query: 546 ACSHAGLVDKGRHIFALMTNKYNIFPK 626 ACSHAGLV++GR FA MTN++NI PK Sbjct: 190 ACSHAGLVEEGRRTFASMTNEHNITPK 216 Score = 72.4 bits (176), Expect = 6e-11 Identities = 36/159 (22%), Positives = 83/159 (52%), Gaps = 9/159 (5%) Frame = +3 Query: 12 LIASTSMVMGYSKVGKIGAARSIFDELVEKDLVCWSAMISGYAESDWPLEALKLFNDMQQ 191 L + +++ Y+K G +GAAR +F+++ ++++ W++MI+ +A ALK F M+ Sbjct: 115 LPVNNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKD 174 Query: 192 AGLRPDQITMLSVISACAQLGILDQAKWVHLFIDKNCFGDVLSINN---------ALIDM 344 ++P+ +T + V+ AC+ G++++ + F + + +N ++D+ Sbjct: 175 ENIKPNGVTFVGVLYACSHAGLVEEGR--------RTFASMTNEHNITPKHEHYGCMVDL 226 Query: 345 YAKCGSLENASRVFHKIPERRRNVITWTSMITGFAMHGD 461 + + L +A + +P NV+ W S++ +HG+ Sbjct: 227 FGRANLLRDALELVETMP-LAPNVVIWGSLMAACQIHGE 264 >ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like [Glycine max] Length = 721 Score = 264 bits (674), Expect = 1e-68 Identities = 128/208 (61%), Positives = 161/208 (77%) Frame = +3 Query: 6 KDLIASTSMVMGYSKVGKIGAARSIFDELVEKDLVCWSAMISGYAESDWPLEALKLFNDM 185 K ++ ST+M+ GY+K+G + AR IFD +VEKDLVCWSAMISGYAES PLEAL+LFN+M Sbjct: 281 KHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEM 340 Query: 186 QQAGLRPDQITMLSVISACAQLGILDQAKWVHLFIDKNCFGDVLSINNALIDMYAKCGSL 365 Q+ + PDQITMLSVISACA +G L QAKW+H + DKN FG L INNALIDMYAKCG+L Sbjct: 341 QRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNL 400 Query: 366 ENASRVFHKIPERRRNVITWTSMITGFAMHGDAGTALRLFDQMNADGIEPNSITFVSVLY 545 A VF +P R+NVI+W+SMI FAMHGDA +A+ LF +M IEPN +TF+ VLY Sbjct: 401 VKAREVFENMP--RKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLY 458 Query: 546 ACSHAGLVDKGRHIFALMTNKYNIFPKQ 629 ACSHAGLV++G+ F+ M N++ I P++ Sbjct: 459 ACSHAGLVEEGQKFFSSMINEHRISPQR 486 Score = 120 bits (301), Expect = 2e-25 Identities = 66/222 (29%), Positives = 117/222 (52%), Gaps = 29/222 (13%) Frame = +3 Query: 9 DLIASTSMVMGYSKVGKIGAARSIFDELVEKDLVCWSAMISGYAESDWPLEALKLFNDMQ 188 D ++++ Y+ G+I AR +FD++ +D+V W+ MI GY+++ LKL+ +M+ Sbjct: 150 DPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMK 209 Query: 189 QAGLRPDQITMLSVISACAQLGILDQAKWVHLFIDKNCFGDVLSINNALIDMYAKCGSLE 368 +G PD I + +V+SACA G L K +H FI N F I +L++MYA CG++ Sbjct: 210 TSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMH 269 Query: 369 NASRVFHKIPER-----------------------------RRNVITWTSMITGFAMHGD 461 A V+ ++P + ++++ W++MI+G+A Sbjct: 270 LAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQ 329 Query: 462 AGTALRLFDQMNADGIEPNSITFVSVLYACSHAGLVDKGRHI 587 AL+LF++M I P+ IT +SV+ AC++ G + + + I Sbjct: 330 PLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWI 371 Score = 79.3 bits (194), Expect = 5e-13 Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 1/174 (0%) Frame = +3 Query: 69 ARSIFDELVEKDLVCWSAMISGYAESDWPLEALKLFNDMQQAGLRPDQITMLSVISACAQ 248 A S+F + + ++ ++ P L L+ +++ G D+ + ++ A ++ Sbjct: 68 ALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSK 127 Query: 249 LGILDQAKWVHLFIDK-NCFGDVLSINNALIDMYAKCGSLENASRVFHKIPERRRNVITW 425 L L+ +H K F I +ALI MYA CG + +A +F K+ R +V+TW Sbjct: 128 LSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHR--DVVTW 185 Query: 426 TSMITGFAMHGDAGTALRLFDQMNADGIEPNSITFVSVLYACSHAGLVDKGRHI 587 MI G++ + L+L+++M G EP++I +VL AC+HAG + G+ I Sbjct: 186 NIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAI 239 >ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor] gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor] Length = 572 Score = 258 bits (659), Expect = 6e-67 Identities = 124/207 (59%), Positives = 160/207 (77%) Frame = +3 Query: 6 KDLIASTSMVMGYSKVGKIGAARSIFDELVEKDLVCWSAMISGYAESDWPLEALKLFNDM 185 KDL++ST+MV GY++ K AR IFD + EKD+V WSAMISGYA+S+ P EAL LFNDM Sbjct: 235 KDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDM 294 Query: 186 QQAGLRPDQITMLSVISACAQLGILDQAKWVHLFIDKNCFGDVLSINNALIDMYAKCGSL 365 Q+ G+RPD++TMLSVISACA LG LD+AKW+H FI N +L I NALIDM+AKCG + Sbjct: 295 QECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCGGI 354 Query: 366 ENASRVFHKIPERRRNVITWTSMITGFAMHGDAGTALRLFDQMNADGIEPNSITFVSVLY 545 A +F+++P+ +NVITWTSMIT FAMHGD +AL LF+QM +G+EPN +TF+++LY Sbjct: 355 NLALNIFNEMPQ--KNVITWTSMITAFAMHGDGKSALCLFEQMRNEGVEPNEVTFLNLLY 412 Query: 546 ACSHAGLVDKGRHIFALMTNKYNIFPK 626 AC HAGLV +GR +F+ M +Y I PK Sbjct: 413 ACCHAGLVHEGRSLFSSMVQQYGIEPK 439 Score = 119 bits (297), Expect = 6e-25 Identities = 67/231 (29%), Positives = 120/231 (51%), Gaps = 32/231 (13%) Frame = +3 Query: 9 DLIASTSMVMGYSKVGKIGAARSIFDELVEKDLVCWSAMISGYAESDWPLEALKLFNDMQ 188 D T++V Y+ G +G AR +FD + +D+V W M+ Y ++ EAL F M+ Sbjct: 104 DGFVRTALVGAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMK 163 Query: 189 QAGLRPDQITMLSVISACAQLGILDQAKWVHLFIDKNCFGDVL---SINNALIDMYAKCG 359 +G+ DQ+ + +V+SAC + L K +H ++ D+L +++ALI++YA C Sbjct: 164 NSGVLSDQLILATVLSACGHIRHLRTGKSIHSYM---LVSDILINAHLSSALINLYASCA 220 Query: 360 SLENASRVFHKIPER-----------------------------RRNVITWTSMITGFAM 452 S+E A ++++ +P + ++V++W++MI+G+A Sbjct: 221 SMEMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYAD 280 Query: 453 HGDAGTALRLFDQMNADGIEPNSITFVSVLYACSHAGLVDKGRHIFALMTN 605 AL LF+ M GI P+ +T +SV+ AC++ G +DK + I A + N Sbjct: 281 SNQPNEALSLFNDMQECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKN 331 Score = 65.9 bits (159), Expect = 6e-09 Identities = 37/153 (24%), Positives = 78/153 (50%), Gaps = 1/153 (0%) Frame = +3 Query: 6 KDLIASTSMVMGYSKVGKIGAARSIFDELVEKDLVCWSAMISGYAESDWPLEALKLFNDM 185 K L +++ ++K G I A +IF+E+ +K+++ W++MI+ +A AL LF M Sbjct: 336 KILHICNALIDMFAKCGGINLALNIFNEMPQKNVITWTSMITAFAMHGDGKSALCLFEQM 395 Query: 186 QQAGLRPDQITMLSVISACAQLGILDQAKWVHL-FIDKNCFGDVLSINNALIDMYAKCGS 362 + G+ P+++T L+++ AC G++ + + + + + ++D+ + Sbjct: 396 RNEGVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGRAKL 455 Query: 363 LENASRVFHKIPERRRNVITWTSMITGFAMHGD 461 ++ A + + R NV W S++ MHGD Sbjct: 456 MQEAVNLIESM-HLRPNVPVWGSLLAACWMHGD 487 >ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 726 Score = 255 bits (652), Expect = 4e-66 Identities = 122/206 (59%), Positives = 159/206 (77%) Frame = +3 Query: 6 KDLIASTSMVMGYSKVGKIGAARSIFDELVEKDLVCWSAMISGYAESDWPLEALKLFNDM 185 K LI ST+M+ GY+K+G + AR IFD+++E+DLVCWSAMISGYAESD P EALKLF++M Sbjct: 286 KHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEM 345 Query: 186 QQAGLRPDQITMLSVISACAQLGILDQAKWVHLFIDKNCFGDVLSINNALIDMYAKCGSL 365 Q PDQITMLSVISAC+ +G L QA W+H ++D++ FG LS+NNALIDMYAKCG+L Sbjct: 346 LQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNL 405 Query: 366 ENASRVFHKIPERRRNVITWTSMITGFAMHGDAGTALRLFDQMNADGIEPNSITFVSVLY 545 A VF +P R+NVI+W+SMI FAMHG+A +A++LF +M IEPN +TF+ VLY Sbjct: 406 VKAREVFENMP--RKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLY 463 Query: 546 ACSHAGLVDKGRHIFALMTNKYNIFP 623 AC HAGLV++G +F+ M N++ I P Sbjct: 464 ACGHAGLVEEGEKLFSSMINEHGISP 489 Score = 119 bits (298), Expect = 5e-25 Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 29/222 (13%) Frame = +3 Query: 9 DLIASTSMVMGYSKVGKIGAARSIFDELVEKDLVCWSAMISGYAESDWPLEALKLFNDMQ 188 D T ++ Y+ +I AR +FD++ D V W+ +I GY ++ +AL+LF DM+ Sbjct: 155 DPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMR 214 Query: 189 QAGLRPDQITMLSVISACAQLGILDQAKWVHLFIDKNCFGDVLSINNALIDMYAKCGSLE 368 + ++PD + + +V+SAC G L + +H F+ N + + ALI+MYA CG+++ Sbjct: 215 SSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMD 274 Query: 369 NASRVFHKIPER-----------------------------RRNVITWTSMITGFAMHGD 461 A +++ + + R+++ W++MI+G+A Sbjct: 275 LARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQ 334 Query: 462 AGTALRLFDQMNADGIEPNSITFVSVLYACSHAGLVDKGRHI 587 AL+LFD+M P+ IT +SV+ ACSH G + + I Sbjct: 335 PQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWI 376 Score = 77.4 bits (189), Expect = 2e-12 Identities = 39/152 (25%), Positives = 80/152 (52%), Gaps = 1/152 (0%) Frame = +3 Query: 12 LIASTSMVMGYSKVGKIGAARSIFDELVEKDLVCWSAMISGYAESDWPLEALKLFNDMQQ 191 L + +++ Y+K G + AR +F+ + K+++ WS+MI+ +A A+KLF M++ Sbjct: 389 LSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKE 448 Query: 192 AGLRPDQITMLSVISACAQLGILDQA-KWVHLFIDKNCFGDVLSINNALIDMYAKCGSLE 368 + P+ +T + V+ AC G++++ K I+++ ++D+Y + L Sbjct: 449 VNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLR 508 Query: 369 NASRVFHKIPERRRNVITWTSMITGFAMHGDA 464 A + +P NVI W S+++ +HG+A Sbjct: 509 KAIELIETMPFAP-NVIIWGSLMSACQVHGEA 539