BLASTX nr result

ID: Coptis21_contig00026163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026163
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633975.1| PREDICTED: uncharacterized protein LOC100854...    92   5e-17
emb|CBI40308.3| unnamed protein product [Vitis vinifera]               92   5e-17
ref|XP_002268731.1| PREDICTED: uncharacterized protein LOC100255...    82   5e-14
ref|XP_002313367.1| predicted protein [Populus trichocarpa] gi|2...    80   4e-13
ref|XP_003601487.1| hypothetical protein MTR_3g082210 [Medicago ...    78   1e-12

>ref|XP_003633975.1| PREDICTED: uncharacterized protein LOC100854219 [Vitis vinifera]
          Length = 177

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 58/141 (41%), Positives = 77/141 (54%), Gaps = 7/141 (4%)
 Frame = +2

Query: 83  NHAEIQVIF----DLINSTMTTQKVVIKIMSMNGAKSRTKALKIAVCAAGVVSVELQG-- 244
           N A  +V+F     L+N     QKVVIK+      KSRTK ++ AV A GV S+   G  
Sbjct: 38  NFASERVVFLGKIFLLNREEMKQKVVIKVSFNGEKKSRTKVMQAAVGAPGVESIAFGGED 97

Query: 245 -DQIVVTGEGIDSPELTCLLRKKVGCAELVSVAXXXXXXXXXXXXXTSAEPLIWTPQYPY 421
            DQIVV G+ +DS  LT LLRKKV  AEL+SV+                +P++W P Y  
Sbjct: 98  NDQIVVIGDSLDSVNLTRLLRKKVKFAELLSVSSVDEKKEEKKMTEPGVQPMVW-PTYQA 156

Query: 422 GTPPFYVSEIRDNNQDPCTIM 484
           G P +Y + +RDN  + C+IM
Sbjct: 157 GVPQYYYTIVRDNRDETCSIM 177


>emb|CBI40308.3| unnamed protein product [Vitis vinifera]
          Length = 316

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 58/141 (41%), Positives = 77/141 (54%), Gaps = 7/141 (4%)
 Frame = +2

Query: 83  NHAEIQVIF----DLINSTMTTQKVVIKIMSMNGAKSRTKALKIAVCAAGVVSVELQG-- 244
           N A  +V+F     L+N     QKVVIK+      KSRTK ++ AV A GV S+   G  
Sbjct: 177 NFASERVVFLGKIFLLNREEMKQKVVIKVSFNGEKKSRTKVMQAAVGAPGVESIAFGGED 236

Query: 245 -DQIVVTGEGIDSPELTCLLRKKVGCAELVSVAXXXXXXXXXXXXXTSAEPLIWTPQYPY 421
            DQIVV G+ +DS  LT LLRKKV  AEL+SV+                +P++W P Y  
Sbjct: 237 NDQIVVIGDSLDSVNLTRLLRKKVKFAELLSVSSVDEKKEEKKMTEPGVQPMVW-PTYQA 295

Query: 422 GTPPFYVSEIRDNNQDPCTIM 484
           G P +Y + +RDN  + C+IM
Sbjct: 296 GVPQYYYTIVRDNRDETCSIM 316



 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 56/137 (40%), Positives = 73/137 (53%), Gaps = 3/137 (2%)
 Frame = +2

Query: 101 VIFDLINSTMTTQKVVIKIMSMNGAKSRTKALKIAVCAAGVVSVELQG---DQIVVTGEG 271
           +I  L       QKVVIK+      KSRTK ++ AV   GV S+   G   DQIVV GE 
Sbjct: 33  LIISLTELERMKQKVVIKVSFSGEKKSRTKVMQAAVGVPGVESIAFGGEDNDQIVVIGES 92

Query: 272 IDSPELTCLLRKKVGCAELVSVAXXXXXXXXXXXXXTSAEPLIWTPQYPYGTPPFYVSEI 451
           +DS  LTCLLRKKV  AEL+SV+                +P++W P    G P +Y + +
Sbjct: 93  LDSVNLTCLLRKKVRFAELLSVS-SVEKEEEEKMTEPGVQPMVW-PTVQAGVPQYYYTVV 150

Query: 452 RDNNQDPCTIM*VRRAR 502
            DN  +PC+IM + R R
Sbjct: 151 PDNRSEPCSIMDIDRRR 167


>ref|XP_002268731.1| PREDICTED: uncharacterized protein LOC100255094 [Vitis vinifera]
          Length = 124

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
 Frame = +2

Query: 137 QKVVIKIMSMNGAKSRTKALKIAVCAAGVVSVELQGD---QIVVTGEGIDSPELTCLLRK 307
           QK+VI++      K R+KA++ AV   GV S+ L+G+   QIVV G+ +DS  LTCLLRK
Sbjct: 3   QKMVIRVPMNGEKKCRSKAMQTAVGVPGVESIALEGEDKNQIVVIGDSVDSVNLTCLLRK 62

Query: 308 KVGCAELVSVAXXXXXXXXXXXXXTSA-EPLIWTPQYPYGTPPFYVSEI---RDNNQDPC 475
           K G AEL+SV+                 +P++W+P Y  G P +Y S +     NN D C
Sbjct: 63  KFGSAELLSVSAVSEKKQKENMTEPGVLQPMVWSP-YQAGVPQYYYSTVVCEDKNNYDTC 121

Query: 476 TIM 484
           +IM
Sbjct: 122 SIM 124


>ref|XP_002313367.1| predicted protein [Populus trichocarpa] gi|222849775|gb|EEE87322.1|
           predicted protein [Populus trichocarpa]
          Length = 114

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 53/119 (44%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
 Frame = +2

Query: 137 QKVVIKIMSMNGAKSRTKALKIAVCAAGVVSVELQGD---QIVVTGEGIDSPELTCLLRK 307
           QK+VIK+   NG KSRTKAL+IAV  +GV S  L G+   QI V G+G+D+ +LT LLRK
Sbjct: 3   QKIVIKVTG-NGPKSRTKALRIAVGLSGVESARLGGEDKSQIEVVGDGVDAVQLTNLLRK 61

Query: 308 KVGCAELVSVAXXXXXXXXXXXXXTSAEPLIWTPQYPYGTPPFYVSEIRDNNQDPCTIM 484
           KVG AEL SV                 +P+ W P Y  G P  Y+  I  +    C+IM
Sbjct: 62  KVGYAELASV-----EAVGEKKEEPEVQPVDW-PVYVGGMPQTYIYPIHPHQDPSCSIM 114


>ref|XP_003601487.1| hypothetical protein MTR_3g082210 [Medicago truncatula]
           gi|355490535|gb|AES71738.1| hypothetical protein
           MTR_3g082210 [Medicago truncatula]
          Length = 115

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 56/123 (45%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
 Frame = +2

Query: 128 MTTQKVVIKIMSMNGAKSRTKALKIAVCAAGVVSVELQG---DQIVVTGEGIDSPELTCL 298
           M  QK+VIK+  MN  KSR+KA+KIAV  +GV S  ++G   DQI VTGE ID+ +LTCL
Sbjct: 1   MAKQKIVIKVSIMNSHKSRSKAMKIAVGVSGVESAAVKGDSKDQIEVTGEQIDAAKLTCL 60

Query: 299 LRKKVGCAELVSVAXXXXXXXXXXXXXTSAEPLIWTPQYPYGTPPFYVSEIRDNNQDP-C 475
           LRKK   A+LVSV               +   +   P YP       V EIRD   DP C
Sbjct: 61  LRKKFCHADLVSVGEVEKKEEKKEEAIVAWPCVAGYPHYPVP-----VCEIRD---DPSC 112

Query: 476 TIM 484
           +IM
Sbjct: 113 SIM 115


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