BLASTX nr result

ID: Coptis21_contig00026159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026159
         (1272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30029.3| unnamed protein product [Vitis vinifera]              366   8e-99
ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794...   338   2e-90
ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795...   332   2e-88
ref|XP_002303178.1| hypothetical protein POPTRDRAFT_756569 [Popu...   323   6e-86
ref|XP_002298194.1| chromatin remodeling complex subunit [Populu...   314   3e-83

>emb|CBI30029.3| unnamed protein product [Vitis vinifera]
          Length = 1695

 Score =  366 bits (939), Expect = 8e-99
 Identities = 212/375 (56%), Positives = 252/375 (67%), Gaps = 18/375 (4%)
 Frame = -3

Query: 1072 MASKGPRSKLDHETRARRQKALEAPRD-RRPKAHWDHVLEEMLWLSKDFEAERKWKLALA 896
            MASKGPRSKLDHETRARRQKALEAPR+ RRPK HWDHVL+EM+WLSKDFE+ERKWKLA A
Sbjct: 1    MASKGPRSKLDHETRARRQKALEAPREPRRPKTHWDHVLDEMVWLSKDFESERKWKLAQA 60

Query: 895  KKVAIRASKNALDPATRGEKKVKEEEQRLRKVALNISKDVKKFWIKIEKLVLYKHQLEVE 716
            KKVA+RASK  LD ATRGEK+VKEEEQRLRKVAL ISKDVKKFWIKIEKLVLYKHQ+E++
Sbjct: 61   KKVALRASKGMLDQATRGEKRVKEEEQRLRKVALTISKDVKKFWIKIEKLVLYKHQMELD 120

Query: 715  EKKKKALDKQLDFLLGQTERYSTMLAENLVDMPYPCTPKCPDSAVDQPNGEDIEDGTELV 536
            EKKKKALDKQL+FLLGQTERYSTMLAENL D   P     P         E  + G +  
Sbjct: 121  EKKKKALDKQLEFLLGQTERYSTMLAENLADTYQPTQQYLPKERCSIQYKEVDDPGFK-- 178

Query: 535  ESPEHCENMDIDGXXXXXXXXXXXXXXXXXXXXEALITADERQEELEALQDEMDIPLEEL 356
            E P+     D+D                     EALIT +ERQEELEAL +E+D+PLEEL
Sbjct: 179  EVPQ-SGIADVDEDYDMQSEEELEDDEHTIEEDEALITEEERQEELEALHNEIDLPLEEL 237

Query: 355  LKRYNSDKVSMEESPL-------NGENVAEPIQVEENLGKGNHCFGGGETDTSNSC---- 209
            LKRY   KVS +E+ +       +G +  +  +  E    G+  FGG   D S++C    
Sbjct: 238  LKRYAMKKVSCDENNIEKLLSVSSGSSQDKDEEEAEPTSVGDDHFGGEGQDLSDTCKIDK 297

Query: 208  -----IIGHHSGVSNGEISLLETDKVEVDTSQSK-IQLKGCEKLEKQPLVSCSDEQEDGD 47
                 +IG   G SNG +S+ E   +EVDT Q+K +     E  E+  +   +DEQEDGD
Sbjct: 298  NSSLTVIGRRCGESNGSLSISEHHLLEVDTCQAKNVSEISRESDEESKVYDFNDEQEDGD 357

Query: 46   YILAADEEKDDETTM 2
            ++LA  EEKDDETT+
Sbjct: 358  FVLATGEEKDDETTL 372


>ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794898 [Glycine max]
          Length = 2041

 Score =  338 bits (867), Expect = 2e-90
 Identities = 196/370 (52%), Positives = 249/370 (67%), Gaps = 13/370 (3%)
 Frame = -3

Query: 1072 MASKGPRSKLDHETRARRQKALEAPRD-RRPKAHWDHVLEEMLWLSKDFEAERKWKLALA 896
            MASKGPRS++DHE+RA+RQKALEAPR+ RRPK HWDHVLEEM+WLSKDFE+ERKWKLA A
Sbjct: 1    MASKGPRSRIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA 60

Query: 895  KKVAIRASKNALDPATRGEKKVKEEEQRLRKVALNISKDVKKFWIKIEKLVLYKHQLEVE 716
            KKVA+RASK  LD ATRGEKK+KEEEQRLRKVALNISKDVKKFW KIEKLVLYKHQ+E++
Sbjct: 61   KKVALRASKGMLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMELD 120

Query: 715  EKKKKALDKQLDFLLGQTERYSTMLAENLVDMPYPCTPKCPDSAVDQPNGEDIEDGTELV 536
            EKKKKALDKQL+FLLGQTERYSTMLAENLVD PY       +++ +       +D  +++
Sbjct: 121  EKKKKALDKQLEFLLGQTERYSTMLAENLVD-PY---KSAENNSAEHHMSIQCKDVHDVI 176

Query: 535  ESPEHCENM-------DIDGXXXXXXXXXXXXXXXXXXXXEALITADERQEELEALQDEM 377
              P+  + +       D D                     EALIT +ERQEEL AL+DEM
Sbjct: 177  NEPKEADVVEYQSDAADNDEEYDVQYDDESEDDERTIEQDEALITKEERQEELAALRDEM 236

Query: 376  DIPLEELLKRYNSDK---VSMEESPLNGENVAEPIQVEENLGKGNHCFGGGETDTSNSCI 206
            D+P+EELLKRY  DK   V  E SP + E+  + ++  +    G+      +  TSNS I
Sbjct: 237  DLPIEELLKRYAGDKGESVMKESSPEHSEDGGKIVRAGDE--NGDDLLSVSKIGTSNSSI 294

Query: 205  I-GHHSGVSNGEISLLETDKVEVDTSQSK-IQLKGCEKLEKQPLVSCSDEQEDGDYILAA 32
            + G     SNG+++    +  + +  QS+ ++    E   +      +DE+EDGD++L  
Sbjct: 295  VSGRRCDESNGDVATPTNNLSQCENGQSENLKEVPSETANEDFSYDFTDEEEDGDFLLGI 354

Query: 31   DEEKDDETTM 2
             E+KDDETT+
Sbjct: 355  -EDKDDETTL 363


>ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795613 [Glycine max]
          Length = 2057

 Score =  332 bits (850), Expect = 2e-88
 Identities = 194/375 (51%), Positives = 250/375 (66%), Gaps = 18/375 (4%)
 Frame = -3

Query: 1072 MASKGPRSKLDHETRARRQKALEAPRD-RRPKAHWDHVLEEMLWLSKDFEAERKWKLALA 896
            MASKGPRS++DHE+RA+RQKALEAPR+ RRPK HWDHVLEEM+WLSKDFE+ERKWKLA A
Sbjct: 1    MASKGPRSRIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA 60

Query: 895  KKVAIRASKNALDPATRGEKKVKEEEQRLRKVALNISKDVKKFWIKIEKLVLYKHQLEVE 716
            KKVA+RASK  LD ATRGEKK+KEEEQRLRKVALNISKDVKKFW KIEKLVLYKHQ+E++
Sbjct: 61   KKVALRASKGMLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMELD 120

Query: 715  EKKKKALDKQLDFLLGQTERYSTMLAENLVDMPYPCTPKCPDSAVDQPNGEDIEDGTELV 536
            EKKKKALDKQL+FLLGQTERYSTMLAENL D PY       +++ +       +D  +++
Sbjct: 121  EKKKKALDKQLEFLLGQTERYSTMLAENLGD-PY---KSAENNSAEHRKSIHCKDVHDVI 176

Query: 535  ESPEHCENM-------DIDGXXXXXXXXXXXXXXXXXXXXEALITADERQEELEALQDEM 377
              P+  + +       D D                     EALIT +ERQEEL AL+DEM
Sbjct: 177  NEPKEADVVEYQSDAADNDEEYDVQSDDELEDDERTIEQDEALITKEERQEELAALRDEM 236

Query: 376  DIPLEELLKRYNSDK---VSMEESPLNGENVAEPIQV---EENLGKGNH--CFGGGETDT 221
            D+P++ELLKRY  +K   V    SP + E+  + ++    ++ LG  N        + DT
Sbjct: 237  DLPIQELLKRYAGEKGESVMKGSSPEHSEDGGKIVRAGDGKKGLGSENRDDLLSVSKVDT 296

Query: 220  SNSCII-GHHSGVSNGEISLLETDKVEVDTSQSK-IQLKGCEKLEKQPLVSCSDEQEDGD 47
            SNS ++ G     SNG+++    +  + +  QS+ ++    E   +      +DE+EDGD
Sbjct: 297  SNSSMVSGRRCDESNGDVATPTNNLSQCEDGQSENLKETPSETANEDFAYDFTDEEEDGD 356

Query: 46   YILAADEEKDDETTM 2
            ++L   E+KDDETT+
Sbjct: 357  FLLVT-EDKDDETTL 370


>ref|XP_002303178.1| hypothetical protein POPTRDRAFT_756569 [Populus trichocarpa]
            gi|222840610|gb|EEE78157.1| hypothetical protein
            POPTRDRAFT_756569 [Populus trichocarpa]
          Length = 418

 Score =  323 bits (828), Expect = 6e-86
 Identities = 193/345 (55%), Positives = 226/345 (65%), Gaps = 25/345 (7%)
 Frame = -3

Query: 1072 MASKGPRSKLDHETRARRQKALEAPRD-RRPKAHWDHVLEEMLWLSKDFEAERKWKLALA 896
            MASKGPRSKLDHETRARRQKALEAPR+ RRPK HWDHVLEEM+WLSKDFE+ERKWKLA A
Sbjct: 1    MASKGPRSKLDHETRARRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA 60

Query: 895  KKVAIRASKNALDPATRGEKKVKEEEQRLRKVALNISKDVKKFWIKIEKLVLYKHQLEVE 716
            KKVA+RASK  LD ATRGEKK+KEEEQRLRKVA+NISKDVKKFW+KIEKLVLYKHQ+E++
Sbjct: 61   KKVALRASKGMLDQATRGEKKLKEEEQRLRKVAVNISKDVKKFWVKIEKLVLYKHQMELD 120

Query: 715  EKKKKALDKQLDFLLGQTERYSTMLAENLVDMP-----YPCTPKCPDSAVDQPNGE-DIE 554
            EKKKKALDK L+FLLGQTERYSTMLAENLV+ P      P  P   D   D  N    + 
Sbjct: 121  EKKKKALDKHLEFLLGQTERYSTMLAENLVEKPPEQYFAPEKPSIADRVGDDANTPLQVV 180

Query: 553  DGTE----LVESPEHC-----ENMDIDGXXXXXXXXXXXXXXXXXXXXEALITADERQEE 401
            D  +    L++   HC     +  D D                     EALIT +ERQEE
Sbjct: 181  DAGQWADILIKFSAHCLEAQVDTADNDDEYDVQSEDEVEDDEHTIEEDEALITKEERQEE 240

Query: 400  LEALQDEMDIPLEELLKRYNSDKVSMEESPLNGENVAEPIQVEENLGKGNHCFGGGETDT 221
            LEAL +EMDIPLEELLKRY  +K   E S    EN A+P    E      HC   GE D 
Sbjct: 241  LEALHNEMDIPLEELLKRYAVEKGGRESS----ENGAKPCANGE-----EHCESKGE-DI 290

Query: 220  SNSCII---------GHHSGVSNGEISLLETDKVEVDTSQSKIQL 113
            S +C +         G   G +NG + + + + +E+   +++ QL
Sbjct: 291  SAACEMEISSSPVNAGRRCGENNGALPIPDNNLLEIGAYETRNQL 335


>ref|XP_002298194.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222845452|gb|EEE82999.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 323

 Score =  314 bits (805), Expect = 3e-83
 Identities = 180/278 (64%), Positives = 198/278 (71%), Gaps = 15/278 (5%)
 Frame = -3

Query: 1072 MASKGPRSKLDHETRARRQKALEAPRD-RRPKAHWDHVLEEMLWLSKDFEAERKWKLALA 896
            MASKGPRSKLDHETRARRQKALEAPR+ RRPK HWDHVLEEM+WLSKDFE+ERKWKLA A
Sbjct: 1    MASKGPRSKLDHETRARRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA 60

Query: 895  KKVAIRASKNALDPATRGEKKVKEEEQRLRKVALNISKDVKKFWIKIEKLVLYKHQLEVE 716
            KKVA+RASK  LD ATRGEKK+KEEEQRLRKVALNISKDVKKFW+KIEKLVLYKHQ+E++
Sbjct: 61   KKVALRASKGMLDQATRGEKKLKEEEQRLRKVALNISKDVKKFWVKIEKLVLYKHQMELD 120

Query: 715  EKKKKALDKQLDFLLGQTERYSTMLAENLVDMP---YPC--TPKCPDSAVDQPN-GEDIE 554
            EKKKKALDKQL+FLLGQTERYSTMLAENLVD P   Y     P+      D  N  E + 
Sbjct: 121  EKKKKALDKQLEFLLGQTERYSTMLAENLVDKPSEQYAAQDKPRIAYKKGDDANIPEQVN 180

Query: 553  DGTELVESPE--------HCENMDIDGXXXXXXXXXXXXXXXXXXXXEALITADERQEEL 398
            DG   +  P           +  D D                     EALITA+ERQEEL
Sbjct: 181  DGKRQISLPNVWHNCLEPQLDTTDNDDEYDVQSEDEVEDDEHTIEEDEALITAEERQEEL 240

Query: 397  EALQDEMDIPLEELLKRYNSDKVSMEESPLNGENVAEP 284
            EAL +E DIPLEELL RY  +K S E S    EN A+P
Sbjct: 241  EALHNETDIPLEELLNRYPVEKGSGESS----ENGAKP 274


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