BLASTX nr result

ID: Coptis21_contig00026148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026148
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634495.1| PREDICTED: protein MKS1-like [Vitis vinifera]     160   4e-37
ref|XP_002526136.1| Protein MKS1, putative [Ricinus communis] gi...   158   1e-36
ref|XP_002302188.1| predicted protein [Populus trichocarpa] gi|2...   155   1e-35
emb|CAN66427.1| hypothetical protein VITISV_029011 [Vitis vinifera]   153   4e-35
ref|XP_002306685.1| predicted protein [Populus trichocarpa] gi|2...   151   1e-34

>ref|XP_003634495.1| PREDICTED: protein MKS1-like [Vitis vinifera]
          Length = 218

 Score =  160 bits (404), Expect = 4e-37
 Identities = 93/202 (46%), Positives = 114/202 (56%), Gaps = 3/202 (1%)
 Frame = -1

Query: 663 SPRRELQGPRPTPLKVRKDSHKIKKPPIAXXXXXXXXXXXXXXXXXXXXPVIIYTISPKV 484
           SPRREL GPRPTPLKVRKDSHKI+KPP+                      VIIYT+SPK+
Sbjct: 11  SPRRELLGPRPTPLKVRKDSHKIRKPPVVPQPQAQHPPP-----------VIIYTVSPKI 59

Query: 483 IHTNASDFMSLVQRLTGPSTSIPPPINQASGALSPAARYASIEKAKMPSEGDKPRYYNMD 304
           IHT  S+FM+LVQRLTG S+S        SGA+SPAAR+ASIEK K+ +E +K +     
Sbjct: 60  IHTQPSEFMTLVQRLTGLSSSSSSSAPLDSGAVSPAARFASIEKTKVSAEEEKKKKMQSS 119

Query: 303 ---SILEELDLGPNVERTXXXXXXXXXXXXXXXXXXXXXXXXXSDHNSFNFLHDLSPMFQ 133
               ++E +++G  VER+                          D  S N  HD SP   
Sbjct: 120 GDVDVVEGIEIGGGVERSGWFPGILSPGPSSLPAISPNFFSPGFDPYSLNIFHDFSPAVH 179

Query: 132 GNKNYFEGTYMPSPNSTFLSAP 67
           GNKNY EG++MPSP STFLS P
Sbjct: 180 GNKNYIEGSFMPSP-STFLSTP 200


>ref|XP_002526136.1| Protein MKS1, putative [Ricinus communis]
           gi|223534513|gb|EEF36212.1| Protein MKS1, putative
           [Ricinus communis]
          Length = 254

 Score =  158 bits (400), Expect = 1e-36
 Identities = 106/236 (44%), Positives = 129/236 (54%), Gaps = 28/236 (11%)
 Frame = -1

Query: 678 PYDKP---SPRRELQGPRPTPLKVRKDSHKIKKPPIA-XXXXXXXXXXXXXXXXXXXXPV 511
           PYD P   SPR+ELQGPRP  LKVRKDSHKIKKPP+A                     PV
Sbjct: 3   PYDFPVTRSPRKELQGPRPPALKVRKDSHKIKKPPVAPQPSQQHQNQQQQYQQSQPRPPV 62

Query: 510 IIYTISPKVIHTNASDFMSLVQRLTGP--------------STSIPP------PINQASG 391
           IIYT+SPKVIHTN SDFM+LVQRLTG               STS P       P N  SG
Sbjct: 63  IIYTVSPKVIHTNPSDFMNLVQRLTGSTSSSSSSSSSSAACSTSNPTSYSSSNPFNDYSG 122

Query: 390 ALSPAARYASIEKAKMPSEGDKPRYYNMDSI--LEELDLGPNVERT-XXXXXXXXXXXXX 220
           A+SPAAR+A+IEKAK P+E  K +      +   E +++   +ER+              
Sbjct: 123 AISPAARFATIEKAKSPNENMKQQVQPSGDVGFFEGIEMSQVMERSGNLFHGILSPAPSS 182

Query: 219 XXXXXXXXXXXXSDHNSFNFLHDLSPMFQGNKNYFEGTYMPSPNSTFLSAPI-ASP 55
                       SD N  +FLHDLSP   GN+++ EGT+MPSP++TFLS  + ASP
Sbjct: 183 LPPISPNFFSPPSDPNMMSFLHDLSPALHGNRSFLEGTFMPSPSTTFLSPRLTASP 238


>ref|XP_002302188.1| predicted protein [Populus trichocarpa] gi|222843914|gb|EEE81461.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  155 bits (392), Expect = 1e-35
 Identities = 97/231 (41%), Positives = 124/231 (53%), Gaps = 13/231 (5%)
 Frame = -1

Query: 708 TDLKMDWPETPYDKPSPRRELQGPRPTPLKVRKDSHKIKKPPIAXXXXXXXXXXXXXXXX 529
           T   MD  + P  + SPR+ELQGPRP  LK+RKDSHKI+KPP+A                
Sbjct: 28  TGFSMDSSDFPISR-SPRKELQGPRPPALKIRKDSHKIRKPPVA--PQPFQQQPQNQPPT 84

Query: 528 XXXXPVIIYTISPKVIHTNASDFMSLVQRLTGPSTSIPP--PINQASGALSPAARYASIE 355
               PVIIYT+SPKVIHTN +DFM+LVQRLTG S++     P N   GA+SPAAR+A+IE
Sbjct: 85  QQRPPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSTSTSSNPFNDDCGAISPAARFATIE 144

Query: 354 KAKMPSEGDKPR-----------YYNMDSILEELDLGPNVERTXXXXXXXXXXXXXXXXX 208
           KA  P +  K +              +D ++E   LGP +                    
Sbjct: 145 KANSPKDQQKQQQLGGDLGYVEGIMEIDRVMERPSLGPGI-----------LSPGPASLP 193

Query: 207 XXXXXXXXSDHNSFNFLHDLSPMFQGNKNYFEGTYMPSPNSTFLSAPIASP 55
                    D NS +F HDLSP+  GN+N+ EG++MPSP STF+   I SP
Sbjct: 194 PIPPNFFSPDQNSVSFFHDLSPILHGNRNFIEGSFMPSP-STFVWPRINSP 243


>emb|CAN66427.1| hypothetical protein VITISV_029011 [Vitis vinifera]
          Length = 252

 Score =  153 bits (387), Expect = 4e-35
 Identities = 87/195 (44%), Positives = 109/195 (55%), Gaps = 3/195 (1%)
 Frame = -1

Query: 663 SPRRELQGPRPTPLKVRKDSHKIKKPPIAXXXXXXXXXXXXXXXXXXXXPVIIYTISPKV 484
           SPRREL GPRPTPLKVRKDSHKI+KPP+                      VIIYT+SPK+
Sbjct: 11  SPRRELLGPRPTPLKVRKDSHKIRKPPVVPQPQAQHPPP-----------VIIYTVSPKI 59

Query: 483 IHTNASDFMSLVQRLTGPSTSIPPPINQASGALSPAARYASIEKAKMPSEGDKPRYYNMD 304
           IHT  S+FM+LVQRLTG S+S        SGA+SPAAR+ASIEK K+ +E +K +     
Sbjct: 60  IHTQPSEFMTLVQRLTGLSSSSSSSAPLDSGAVSPAARFASIEKTKVSAEEEKKKKMQSS 119

Query: 303 ---SILEELDLGPNVERTXXXXXXXXXXXXXXXXXXXXXXXXXSDHNSFNFLHDLSPMFQ 133
               ++E +++G  VER+                          D  S N  HD SP   
Sbjct: 120 GDVDVVEGIEIGGGVERSGWFPGILSPGPSSLPAISPNFFSPGFDPYSLNIFHDFSPAVH 179

Query: 132 GNKNYFEGTYMPSPN 88
           GNKNY EG++MPSP+
Sbjct: 180 GNKNYIEGSFMPSPS 194


>ref|XP_002306685.1| predicted protein [Populus trichocarpa] gi|222856134|gb|EEE93681.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  151 bits (382), Expect = 1e-34
 Identities = 98/227 (43%), Positives = 123/227 (54%), Gaps = 19/227 (8%)
 Frame = -1

Query: 696 MDWPETPYDKPSPRRELQGPRPTPLKVRKDSHKIKKPPIAXXXXXXXXXXXXXXXXXXXX 517
           MD  + P  + SPR+ELQGPRP  LK+RKDSHKIKKPP+A                    
Sbjct: 1   MDSSDFPISR-SPRKELQGPRPPALKIRKDSHKIKKPPVA--PQPSHQKPQNQQQIQPRP 57

Query: 516 PVIIYTISPKVIHTNASDFMSLVQRLTG---------PSTSIPPPINQASGALSPAARYA 364
           PVIIYT+SPKVIHTN +DFM+LVQRLTG          STS  P  +   GA+SPAARYA
Sbjct: 58  PVIIYTLSPKVIHTNPNDFMTLVQRLTGSSSTSTCSSTSTSSNPFNDHDCGAISPAARYA 117

Query: 363 SIEKAKMPSEGDKPR----------YYNMDSILEELDLGPNVERTXXXXXXXXXXXXXXX 214
           +IEKAK P +  K +             +D ++E  +LGP +                  
Sbjct: 118 TIEKAKSPKDQLKQQLGGDVGFVEGIMEIDQVMERTNLGPGI--------LSPGPASLPP 169

Query: 213 XXXXXXXXXXSDHNSFNFLHDLSPMFQGNKNYFEGTYMPSPNSTFLS 73
                     +D NS +F HDLSP+  GN+N+ EG++MPSP STF S
Sbjct: 170 IPPNFFSPASADPNSVSFFHDLSPILHGNRNFIEGSFMPSP-STFFS 215


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