BLASTX nr result
ID: Coptis21_contig00026128
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00026128 (768 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281631.2| PREDICTED: uncharacterized protein LOC100241... 300 2e-79 emb|CBI16215.3| unnamed protein product [Vitis vinifera] 300 2e-79 ref|XP_002314208.1| predicted protein [Populus trichocarpa] gi|2... 280 2e-73 ref|NP_200806.2| ribonuclease P subunit Rpp30 [Arabidopsis thali... 271 1e-70 dbj|BAB08366.1| unnamed protein product [Arabidopsis thaliana] 271 1e-70 >ref|XP_002281631.2| PREDICTED: uncharacterized protein LOC100241609 [Vitis vinifera] Length = 694 Score = 300 bits (769), Expect = 2e-79 Identities = 158/250 (63%), Positives = 186/250 (74%) Frame = +3 Query: 18 GYFDLNIPYTTTIEKGKHPVTKRKTRIKLVTKLIELGYTGIAYNHSIKATAMSDSDSCXX 197 G+FDLNIPY T G + +RIK+V K +ELGY+G+AYN IK MSDSDSC Sbjct: 2 GFFDLNIPYDGTTAAGD-----KSSRIKVVVKAMELGYSGVAYNRKIKGV-MSDSDSCSI 55 Query: 198 XXXXXXXXXXXXXNLYTSVKFHRDLLRVPLDSPFRQYTRLTVSVDSLIQAASLNSGNPVL 377 +L +SV+FHR LL VPL SPFRQYTRLTV+VDS QA++LNSGNPVL Sbjct: 56 PPLSLSSLLKLAPSLSSSVRFHRSLLGVPLSSPFRQYTRLTVAVDSSPQASALNSGNPVL 115 Query: 378 KSYDLVAVKPLNQHVFDHVCKVAEVDLIAIDFSEKLPFRLNLPIVKAAMKRGIYFEITYS 557 KSYDLVAV+PLNQ+ FD C+V+EVDLIAIDFSEKLPFRL LP+VKAA+KRG+YFEITYS Sbjct: 116 KSYDLVAVRPLNQNAFDQACQVSEVDLIAIDFSEKLPFRLKLPMVKAAIKRGVYFEITYS 175 Query: 558 HLVADVQTRRQMILNAKLLVEWTRGKNLIFSSAAASVSELRGPCDVVNXXXXXXXXXXXX 737 +L++DVQ+R+Q+I NAKLLV+WTRG NLIFSSAA SV+ELRGP DV N Sbjct: 176 NLISDVQSRKQVISNAKLLVDWTRGNNLIFSSAAPSVNELRGPYDVANLSSLLGLSMERA 235 Query: 738 XXXISKNCRS 767 ISKNCRS Sbjct: 236 KAAISKNCRS 245 >emb|CBI16215.3| unnamed protein product [Vitis vinifera] Length = 667 Score = 300 bits (769), Expect = 2e-79 Identities = 158/250 (63%), Positives = 186/250 (74%) Frame = +3 Query: 18 GYFDLNIPYTTTIEKGKHPVTKRKTRIKLVTKLIELGYTGIAYNHSIKATAMSDSDSCXX 197 G+FDLNIPY T G + +RIK+V K +ELGY+G+AYN IK MSDSDSC Sbjct: 2 GFFDLNIPYDGTTAAGD-----KSSRIKVVVKAMELGYSGVAYNRKIKGV-MSDSDSCSI 55 Query: 198 XXXXXXXXXXXXXNLYTSVKFHRDLLRVPLDSPFRQYTRLTVSVDSLIQAASLNSGNPVL 377 +L +SV+FHR LL VPL SPFRQYTRLTV+VDS QA++LNSGNPVL Sbjct: 56 PPLSLSSLLKLAPSLSSSVRFHRSLLGVPLSSPFRQYTRLTVAVDSSPQASALNSGNPVL 115 Query: 378 KSYDLVAVKPLNQHVFDHVCKVAEVDLIAIDFSEKLPFRLNLPIVKAAMKRGIYFEITYS 557 KSYDLVAV+PLNQ+ FD C+V+EVDLIAIDFSEKLPFRL LP+VKAA+KRG+YFEITYS Sbjct: 116 KSYDLVAVRPLNQNAFDQACQVSEVDLIAIDFSEKLPFRLKLPMVKAAIKRGVYFEITYS 175 Query: 558 HLVADVQTRRQMILNAKLLVEWTRGKNLIFSSAAASVSELRGPCDVVNXXXXXXXXXXXX 737 +L++DVQ+R+Q+I NAKLLV+WTRG NLIFSSAA SV+ELRGP DV N Sbjct: 176 NLISDVQSRKQVISNAKLLVDWTRGNNLIFSSAAPSVNELRGPYDVANLSSLLGLSMERA 235 Query: 738 XXXISKNCRS 767 ISKNCRS Sbjct: 236 KAAISKNCRS 245 >ref|XP_002314208.1| predicted protein [Populus trichocarpa] gi|222850616|gb|EEE88163.1| predicted protein [Populus trichocarpa] Length = 324 Score = 280 bits (717), Expect = 2e-73 Identities = 152/250 (60%), Positives = 173/250 (69%) Frame = +3 Query: 18 GYFDLNIPYTTTIEKGKHPVTKRKTRIKLVTKLIELGYTGIAYNHSIKATAMSDSDSCXX 197 G+FDLNIP TT + TRIKLV K +ELGY+GIAYN SIK MSD D C Sbjct: 1 GFFDLNIPQDTT----------KTTRIKLVVKAMELGYSGIAYNRSIKGI-MSDHDRCTI 49 Query: 198 XXXXXXXXXXXXXNLYTSVKFHRDLLRVPLDSPFRQYTRLTVSVDSLIQAASLNSGNPVL 377 L SV HRDLL +P SPFRQYTRLTVSVD+ QA LNSGNPVL Sbjct: 50 PLLSLSSLLDVAPALAFSVNLHRDLLGIPRSSPFRQYTRLTVSVDTPSQAQVLNSGNPVL 109 Query: 378 KSYDLVAVKPLNQHVFDHVCKVAEVDLIAIDFSEKLPFRLNLPIVKAAMKRGIYFEITYS 557 K+YD VAVKPL+Q FDH C +EVD+IAIDFS KLPFRL LP+VKAA++RG+YFEITYS Sbjct: 110 KTYDFVAVKPLSQTAFDHACLKSEVDMIAIDFSVKLPFRLKLPMVKAAIERGVYFEITYS 169 Query: 558 HLVADVQTRRQMILNAKLLVEWTRGKNLIFSSAAASVSELRGPCDVVNXXXXXXXXXXXX 737 L+AD+Q RRQMI NAKLLV+WTRGKNLIF+SAA+SV++ RGP DV N Sbjct: 170 DLIADIQVRRQMIPNAKLLVDWTRGKNLIFTSAASSVNDFRGPYDVANFSSLFGLSMERA 229 Query: 738 XXXISKNCRS 767 ISKNCRS Sbjct: 230 KTAISKNCRS 239 >ref|NP_200806.2| ribonuclease P subunit Rpp30 [Arabidopsis thaliana] gi|332009878|gb|AED97261.1| ribonuclease P subunit Rpp30 [Arabidopsis thaliana] Length = 581 Score = 271 bits (692), Expect = 1e-70 Identities = 143/251 (56%), Positives = 174/251 (69%), Gaps = 1/251 (0%) Frame = +3 Query: 18 GYFDLNIPYTTTIEKGKHPVTKRKT-RIKLVTKLIELGYTGIAYNHSIKATAMSDSDSCX 194 G+FDL+IPY G + KT R+KL TK +ELGY GIA+N SIK MSD DSC Sbjct: 2 GFFDLSIPYNEPPRSGGKEIAGGKTLRLKLATKAMELGYVGIAHNRSIKGV-MSDKDSCT 60 Query: 195 XXXXXXXXXXXXXXNLYTSVKFHRDLLRVPLDSPFRQYTRLTVSVDSLIQAASLNSGNPV 374 L +SV FHRDLL VP +PFRQYTRLTV V+S Q SLNSGNP+ Sbjct: 61 IPLLTLGSLIKVAPRLASSVGFHRDLLGVPRTTPFRQYTRLTVHVESNAQCQSLNSGNPI 120 Query: 375 LKSYDLVAVKPLNQHVFDHVCKVAEVDLIAIDFSEKLPFRLNLPIVKAAMKRGIYFEITY 554 LKSYD++AV+P+NQ+ FD+ C+ AEVDLI+IDF++K+ FRL P+VKAA++RGIYFEI Y Sbjct: 121 LKSYDIIAVRPMNQNAFDYACEKAEVDLISIDFTDKMLFRLKHPMVKAAIQRGIYFEIKY 180 Query: 555 SHLVADVQTRRQMILNAKLLVEWTRGKNLIFSSAAASVSELRGPCDVVNXXXXXXXXXXX 734 S ++ D QTRRQ+I NAKLLV+WTRGKNLI SS A SV+ELRGP DV+N Sbjct: 181 SDILMDAQTRRQVISNAKLLVDWTRGKNLIISSGAPSVTELRGPNDVINLMFLLGLSAER 240 Query: 735 XXXXISKNCRS 767 ISKNCR+ Sbjct: 241 ARAAISKNCRN 251 >dbj|BAB08366.1| unnamed protein product [Arabidopsis thaliana] Length = 680 Score = 271 bits (692), Expect = 1e-70 Identities = 143/251 (56%), Positives = 174/251 (69%), Gaps = 1/251 (0%) Frame = +3 Query: 18 GYFDLNIPYTTTIEKGKHPVTKRKT-RIKLVTKLIELGYTGIAYNHSIKATAMSDSDSCX 194 G+FDL+IPY G + KT R+KL TK +ELGY GIA+N SIK MSD DSC Sbjct: 2 GFFDLSIPYNEPPRSGGKEIAGGKTLRLKLATKAMELGYVGIAHNRSIKGV-MSDKDSCT 60 Query: 195 XXXXXXXXXXXXXXNLYTSVKFHRDLLRVPLDSPFRQYTRLTVSVDSLIQAASLNSGNPV 374 L +SV FHRDLL VP +PFRQYTRLTV V+S Q SLNSGNP+ Sbjct: 61 IPLLTLGSLIKVAPRLASSVGFHRDLLGVPRTTPFRQYTRLTVHVESNAQCQSLNSGNPI 120 Query: 375 LKSYDLVAVKPLNQHVFDHVCKVAEVDLIAIDFSEKLPFRLNLPIVKAAMKRGIYFEITY 554 LKSYD++AV+P+NQ+ FD+ C+ AEVDLI+IDF++K+ FRL P+VKAA++RGIYFEI Y Sbjct: 121 LKSYDIIAVRPMNQNAFDYACEKAEVDLISIDFTDKMLFRLKHPMVKAAIQRGIYFEIKY 180 Query: 555 SHLVADVQTRRQMILNAKLLVEWTRGKNLIFSSAAASVSELRGPCDVVNXXXXXXXXXXX 734 S ++ D QTRRQ+I NAKLLV+WTRGKNLI SS A SV+ELRGP DV+N Sbjct: 181 SDILMDAQTRRQVISNAKLLVDWTRGKNLIISSGAPSVTELRGPNDVINLMFLLGLSAER 240 Query: 735 XXXXISKNCRS 767 ISKNCR+ Sbjct: 241 ARAAISKNCRN 251