BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026121
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group...    62   6e-08
emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group]            62   6e-08
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]    61   1e-07
emb|CAN79529.1| hypothetical protein VITISV_026262 [Vitis vinifera]    60   2e-07
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...    57   2e-06

>gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108709048|gb|ABF96843.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 594

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/62 (46%), Positives = 39/62 (62%)
 Frame = -2

Query: 188 TSSTIWHQQLGHPSSPTLQFVLHKSHVPVSDTFHVNNFFCESCKFGKSTKLPFKDSFSHT 9
           TSST+WH++LGHP    +  + H S +P S T   NN  C +C+ GK T+LPF  S S T
Sbjct: 478 TSSTLWHRRLGHPGPTAVTTLQHLSAIPRSKT---NNSLCHACQLGKHTRLPFNKSTSST 534

Query: 8   TS 3
           +S
Sbjct: 535 SS 536


>emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group]
          Length = 1455

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/62 (46%), Positives = 39/62 (62%)
 Frame = -2

Query: 188 TSSTIWHQQLGHPSSPTLQFVLHKSHVPVSDTFHVNNFFCESCKFGKSTKLPFKDSFSHT 9
           TSST+WH++LGHP    +  + H S +P S T   NN  C +C+ GK T+LPF  S S T
Sbjct: 559 TSSTLWHRRLGHPGPTAVTTLQHLSAIPRSKT---NNSLCHACQLGKHTRLPFNKSTSST 615

Query: 8   TS 3
           +S
Sbjct: 616 SS 617


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/54 (50%), Positives = 35/54 (64%)
 Frame = -2

Query: 191 RTSSTIWHQQLGHPSSPTLQFVLHKSHVPVSDTFHVNNFFCESCKFGKSTKLPF 30
           +TS   WH +LGHPSS   QF++ K ++ +  T   +NFFCESC   KS KLPF
Sbjct: 445 KTSLANWHHRLGHPSSRIFQFLIRKHNLQIYPTESFHNFFCESCLCNKSHKLPF 498


>emb|CAN79529.1| hypothetical protein VITISV_026262 [Vitis vinifera]
          Length = 752

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/54 (48%), Positives = 36/54 (66%)
 Frame = -2

Query: 191 RTSSTIWHQQLGHPSSPTLQFVLHKSHVPVSDTFHVNNFFCESCKFGKSTKLPF 30
           +TS + WH +LGHPSS   QF++ K ++P+  T   ++FFCE C   KS KLPF
Sbjct: 246 KTSLSNWHHRLGHPSSRIFQFLIRKHNLPIYPTKSFHSFFCELCLCNKSHKLPF 299


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/61 (45%), Positives = 40/61 (65%)
 Frame = -2

Query: 185 SSTIWHQQLGHPSSPTLQFVLHKSHVPVSDTFHVNNFFCESCKFGKSTKLPFKDSFSHTT 6
           SST+WH++LGHPSS  +Q  LHK  + +     +++  C +CK GK T+LPF  S S T+
Sbjct: 487 SSTLWHRRLGHPSSAAIQ-TLHK--LAILPCTKIDHSLCHACKLGKHTRLPFSRSQSSTS 543

Query: 5   S 3
           S
Sbjct: 544 S 544