BLASTX nr result

ID: Coptis21_contig00026119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026119
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15444.3| unnamed protein product [Vitis vinifera]              124   8e-27
ref|XP_002276096.1| PREDICTED: carbon catabolite repressor prote...   124   8e-27
ref|XP_002533410.1| conserved hypothetical protein [Ricinus comm...   117   1e-24
ref|XP_003530011.1| PREDICTED: LOW QUALITY PROTEIN: carbon catab...   115   3e-24
ref|XP_003543162.1| PREDICTED: carbon catabolite repressor prote...   114   6e-24

>emb|CBI15444.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/79 (72%), Positives = 67/79 (84%)
 Frame = -1

Query: 351 GSSSTRDRYGEPLATSYHSLFLGTSDYIWHSKELVPVGVVDTLSITNLRKTRGLPSEEWG 172
           GS  TRD YGEPLATSYHS F+GT DYIWH++ELVPV V++TL +  LRKT GLPSE+WG
Sbjct: 175 GSCRTRDNYGEPLATSYHSKFMGTVDYIWHTEELVPVRVLETLPVDILRKTGGLPSEKWG 234

Query: 171 SDHLALVCKLAFADDNNGT 115
           SDHLALVC+LAFADD + +
Sbjct: 235 SDHLALVCELAFADDGSSS 253


>ref|XP_002276096.1| PREDICTED: carbon catabolite repressor protein 4 homolog 5-like
           [Vitis vinifera]
          Length = 590

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/79 (72%), Positives = 67/79 (84%)
 Frame = -1

Query: 351 GSSSTRDRYGEPLATSYHSLFLGTSDYIWHSKELVPVGVVDTLSITNLRKTRGLPSEEWG 172
           GS  TRD YGEPLATSYHS F+GT DYIWH++ELVPV V++TL +  LRKT GLPSE+WG
Sbjct: 512 GSCRTRDNYGEPLATSYHSKFMGTVDYIWHTEELVPVRVLETLPVDILRKTGGLPSEKWG 571

Query: 171 SDHLALVCKLAFADDNNGT 115
           SDHLALVC+LAFADD + +
Sbjct: 572 SDHLALVCELAFADDGSSS 590


>ref|XP_002533410.1| conserved hypothetical protein [Ricinus communis]
           gi|223526739|gb|EEF28968.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 447

 Score =  117 bits (293), Expect = 1e-24
 Identities = 52/74 (70%), Positives = 65/74 (87%)
 Frame = -1

Query: 351 GSSSTRDRYGEPLATSYHSLFLGTSDYIWHSKELVPVGVVDTLSITNLRKTRGLPSEEWG 172
           GS  TRD +GEPLATSYHS+F+GT DYIWH++EL+PV V++TL I  LR++ GLP+E+WG
Sbjct: 374 GSRRTRDNHGEPLATSYHSMFMGTVDYIWHTQELIPVRVLETLPIDILRRSAGLPNEKWG 433

Query: 171 SDHLALVCKLAFAD 130
           SDHLALVC+LAFAD
Sbjct: 434 SDHLALVCELAFAD 447


>ref|XP_003530011.1| PREDICTED: LOW QUALITY PROTEIN: carbon catabolite repressor protein
           4 homolog 5-like [Glycine max]
          Length = 418

 Score =  115 bits (289), Expect = 3e-24
 Identities = 51/77 (66%), Positives = 66/77 (85%)
 Frame = -1

Query: 351 GSSSTRDRYGEPLATSYHSLFLGTSDYIWHSKELVPVGVVDTLSITNLRKTRGLPSEEWG 172
           G+  TRD  GEPLATSYHS F+GT DYIWHS++L+PV V++TL I  LR++RGLPSE+WG
Sbjct: 340 GNHRTRDDIGEPLATSYHSKFMGTVDYIWHSEDLIPVRVLETLPIDTLRRSRGLPSEKWG 399

Query: 171 SDHLALVCKLAFADDNN 121
           SDHLA+VC++AFA++ N
Sbjct: 400 SDHLAVVCEVAFANNGN 416


>ref|XP_003543162.1| PREDICTED: carbon catabolite repressor protein 4 homolog 5-like
           [Glycine max]
          Length = 405

 Score =  114 bits (286), Expect = 6e-24
 Identities = 51/77 (66%), Positives = 65/77 (84%)
 Frame = -1

Query: 351 GSSSTRDRYGEPLATSYHSLFLGTSDYIWHSKELVPVGVVDTLSITNLRKTRGLPSEEWG 172
           G+  TRD  GEPLATSYHS F+GT DYIWHS++L+PV V++TL I  LR++RGLPSE+WG
Sbjct: 327 GNHRTRDDIGEPLATSYHSKFMGTVDYIWHSEDLIPVRVLETLPIDTLRRSRGLPSEKWG 386

Query: 171 SDHLALVCKLAFADDNN 121
           SDHLA+VC+ AFA++ N
Sbjct: 387 SDHLAVVCEFAFANNAN 403


Top